RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 MB21D2Q8IYB1 491 aaPredicted RBP6.78□□□□□ -1.32
CDH13-206ENST00000562601 NCOA7Q8NI08 942 aa6.78□□□□□ -1.32
CDH13-206ENST00000562601 TTC14Q96N46 770 aa6.78□□□□□ -1.32
CDH13-206ENST00000562601 MMP19Q99542 508 aa6.78□□□□□ -1.32
CDH13-206ENST00000562601 LRRC2Q9BYS8 371 aa6.78□□□□□ -1.32
CDH13-206ENST00000562601 RNF208Q9H0X6 261 aa6.78□□□□□ -1.32
CDH13-206ENST00000562601 MROH8Q9H579 483 aa6.78□□□□□ -1.32
CDH13-206ENST00000562601 VAT1LQ9HCJ6 419 aa6.78□□□□□ -1.32
CDH13-206ENST00000562601 BRD7Q9NPI1 651 aa6.78□□□□□ -1.32
CDH13-206ENST00000562601 ZNF214Q9UL59 606 aaPredicted RBP6.78□□□□□ -1.32
CDH13-206ENST00000562601 PRR12Q9ULL5 1215 aa6.78□□□□□ -1.32
CDH13-206ENST00000562601 SYNPO2Q9UMS6 1093 aa6.78□□□□□ -1.32
CDH13-206ENST00000562601 ZNF536O15090 1300 aa6.77□□□□□ -1.32
CDH13-206ENST00000562601 RBBP6Q7Z6E9 1792 aaKnown RBP6.77□□□□□ -1.33
CDH13-206ENST00000562601 MCM3APO60318 1980 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 PRC1O43663 620 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 SLC25A27O95847 323 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 HMGCRP04035 888 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 ARAFP10398 606 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 FCER1AP12319 257 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 ALAS1P13196 640 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 CPA1P15085 419 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 ZKSCAN1P17029 563 aaPredicted RBP6.77□□□□□ -1.33
CDH13-206ENST00000562601 CD33P20138 364 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 CYP2C19P33261 490 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 CTBSQ01459 385 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 TYRO3Q06418 890 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 CACNB2Q08289 660 aaPredicted RBP6.77□□□□□ -1.33
CDH13-206ENST00000562601 ZNF543Q08ER8 600 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 SEC23AQ15436 765 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 CCDC178Q5BJE1 867 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 TMEM67Q5HYA8 995 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 PRAMEF19Q5SWL8 479 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 BTLAQ7Z6A9 289 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 RAB11FIP4Q86YS3 637 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 SHCBP1Q8NEM2 672 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 SOCS4Q8WXH5 440 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 ANKS1AQ92625 1134 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 DEFB118Q96PH6 123 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 APBA2Q99767 749 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 TEX13BQ9BXU2 312 aa6.77□□□□□ -1.33
CDH13-206ENST00000562601 ERICH2A1L162 156 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 STRNO43815 780 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 DHX16O60231 1041 aaKnown RBP6.76□□□□□ -1.33
CDH13-206ENST00000562601 PLA2G6O60733 806 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 TFRCP02786 760 aaKnown RBP6.76□□□□□ -1.33
CDH13-206ENST00000562601 CELA2BP08218 269 aaPredicted RBP6.76□□□□□ -1.33
CDH13-206ENST00000562601 PARP1P09874 1014 aaKnown RBP6.76□□□□□ -1.33
CDH13-206ENST00000562601 SNHG28P0DPA3 235 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 XRCC5P13010 732 aaKnown RBP6.76□□□□□ -1.33
CDH13-206ENST00000562601 CNGA1P29973 690 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 CCND3P30281 292 aaPredicted RBP6.76□□□□□ -1.33
CDH13-206ENST00000562601 KCTD2Q14681 263 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 WTAPQ15007 396 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 ADCK5Q3MIX3 580 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 USH1GQ495M9 461 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 MUM1L1Q5H9M0 696 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 C16orf46Q6P387 395 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 BTNL9Q6UXG8 535 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 ANKRD35Q8N283 1001 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 TRPV1Q8NER1 839 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 IGDCC4Q8TDY8 1250 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 NUP133Q8WUM0 1156 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 PIBF1Q8WXW3 757 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 ACDQ96AP0 544 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 DDX11Q96FC9 970 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 TCEANC2Q96MN5 208 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 MYL10Q9BUA6 226 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 RANBP17Q9H2T7 1088 aaKnown RBP6.76□□□□□ -1.33
CDH13-206ENST00000562601 RNF146Q9NTX7 359 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 MAD2L2Q9UI95 211 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 CCPG1Q9ULG6 757 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 DDX49Q9Y6V7 483 aaKnown RBP6.76□□□□□ -1.33
CDH13-206ENST00000562601 LCTP09848 1927 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 ZNF236Q9UL36 1845 aa6.76□□□□□ -1.33
CDH13-206ENST00000562601 MKI67P46013 3256 aaKnown RBP6.75□□□□□ -1.33
CDH13-206ENST00000562601 ATP2A1O14983 1001 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 ICAM1P05362 532 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 RXRAP19793 462 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 ADH6P28332 368 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 MCM5P33992 734 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 RGS19P49795 217 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 CNTN2Q02246 1040 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 MLLT1Q03111 559 aaPredicted RBP6.75□□□□□ -1.33
CDH13-206ENST00000562601 SART3Q15020 963 aaKnown RBP6.75□□□□□ -1.33
CDH13-206ENST00000562601 ZNF792Q3KQV3 632 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 MFSD14CQ5VZR4 134 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 ANO1Q5XXA6 986 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 LYPD4Q6UWN0 246 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 NSMFQ6X4W1 530 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 NFXL1Q6ZNB6 911 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 SLCO4C1Q6ZQN7 724 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 CCDC144CPQ8IYA2 1237 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 ADGRF4Q8IZF3 695 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 CHST13Q8NET6 341 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 U2AF1L4Q8WU68 220 aaKnown RBP6.75□□□□□ -1.33
CDH13-206ENST00000562601 SHISA4Q96DD7 197 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 MAML3Q96JK9 1138 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 NEK1Q96PY6 1258 aa6.75□□□□□ -1.33
CDH13-206ENST00000562601 MKNK1Q9BUB5 465 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms