RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 DYNLL2Q96FJ2 89 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 PPP1R9AQ9ULJ8 1098 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 GNAT1P11488 350 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 HOXA13P31271 388 aaPredicted RBP12.14□□□□□ -0.47
RPAP1-204ENST00000562303 FBXW4P57775 412 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 GABPB1Q06547 395 aaPredicted RBP12.14□□□□□ -0.47
RPAP1-204ENST00000562303 FBXL13Q8NEE6 735 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 EXT2Q93063 718 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 COPRSQ9NQ92 184 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 HACD3Q9P035 362 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 GOLGA8IPA6NC78 632 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 GOLGA8JA6NMD2 632 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 HNRNPCL2B2RXH8 293 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 HNRNPCL1O60812 293 aaKnown RBP12.14□□□□□ -0.47
RPAP1-204ENST00000562303 CHEK2O96017 543 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 USP17L8P0C7I0 530 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 PLTPP55058 493 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 CDO1Q16878 200 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 APOA5Q6Q788 366 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 RNF207Q6ZRF8 634 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 JRKLQ9Y4A0 524 aa12.14□□□□□ -0.47
RPAP1-204ENST00000562303 K7ERI5 159 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 PRKAB2O43741 272 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 PPP6R2O75170 966 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 CLTAP09496 248 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 APBA1Q02410 837 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 PDCD2Q16342 344 aaPredicted RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 LCORLQ8N3X6 602 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 GPR108Q9NPR9 543 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 ENC1O14682 589 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 FKBP3Q00688 224 aaKnown RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 SMYD4Q8IYR2 804 aaPredicted RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 G3BP2Q9UN86 482 aaKnown RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 ZBBXA8MT70 800 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 GSPT1P15170 499 aaKnown RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 CTTNQ14247 550 aaKnown RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 TTC19Q6DKK2 380 aaPredicted RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 KLC3Q6P597 504 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 TCP11Q8WWU5 503 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 EMILIN3Q9NT22 766 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 ABCC4O15439 1325 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 NEMP1O14524 444 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 ZBED1O96006 694 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 APOEP02649 317 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 KCTD16Q68DU8 428 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 HSPH1Q92598 858 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 SUDS3Q9H7L9 328 aaPredicted RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 ESRRBO95718 433 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 PLA2G4BP0C869 781 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 SKIV2LQ15477 1246 aaKnown RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 TRIP13Q15645 432 aaPredicted RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 ZBTB41Q5SVQ8 909 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 ZNF658Q5TYW1 1059 aaPredicted RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 SLFN12LQ6IEE8 588 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 BCAS4Q8TDM0 211 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 DHX38Q92620 1227 aaKnown RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 CCDC138Q96M89 665 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 DBNLQ9UJU6 430 aaKnown RBP12.13□□□□□ -0.47
RPAP1-204ENST00000562303 PCDHA5Q9Y5H7 936 aa12.13□□□□□ -0.47
RPAP1-204ENST00000562303 ADD2P35612 726 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 SLC39A14Q15043 492 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 SZRD1Q7Z422 152 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 SPATS2Q86XZ4 545 aaKnown RBP12.12□□□□□ -0.47
RPAP1-204ENST00000562303 CCHCR1Q8TD31 782 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 ZWILCHQ9H900 591 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 FAF1Q9UNN5 650 aaPredicted RBP12.12□□□□□ -0.47
RPAP1-204ENST00000562303 DENND3A2RUS2 1198 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 TMEM247A6NEH6 219 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 LRRC8AQ8IWT6 810 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 ZKSCAN8Q15776 578 aaPredicted RBP12.12□□□□□ -0.47
RPAP1-204ENST00000562303 TBCCQ15814 346 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 SCN4BQ8IWT1 228 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 EFHD1Q9BUP0 239 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 TLR7Q9NYK1 1049 aaKnown RBP12.12□□□□□ -0.47
RPAP1-204ENST00000562303 TMEM94Q12767 1356 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 PGRMC1O00264 195 aaKnown RBP12.12□□□□□ -0.47
RPAP1-204ENST00000562303 PER1O15534 1290 aaPredicted RBP12.12□□□□□ -0.47
RPAP1-204ENST00000562303 C21orf2O43822 256 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 PROSER3Q2NL68 480 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 ERICH1Q86X53 443 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 ATP8A1Q9Y2Q0 1164 aa12.12□□□□□ -0.47
RPAP1-204ENST00000562303 DNAJC8O75937 253 aaPredicted RBP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 RBL2Q08999 1139 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 GOLGA8FQ08AF8 430 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 NSUN2Q08J23 767 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 GOLGA8DPQ0D2H9 430 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 GRAPQ13588 217 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 FRA10AC1Q70Z53 315 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 FOXP4Q8IVH2 680 aaPredicted RBP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 GRAPLQ8TC17 118 aaPredicted RBP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 PIDD1Q9HB75 910 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 PIM2Q9P1W9 311 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 HSPA6P17066 643 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 ETF1P62495 437 aaKnown RBP12.11□□□□□ -0.47
RPAP1-204ENST00000562303 SLC35F6Q8N357 371 aa12.11□□□□□ -0.47
RPAP1-204ENST00000562303 EPB41L5Q9HCM4 733 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms