RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 RSPH10B2B2RC85 870 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 FIBPO43427 364 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 LGR5O75473 907 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 GJB5O95377 273 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 RSPH10BP0C881 870 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 BMP1P13497 986 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 KIF5BP33176 963 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 NEDD9Q14511 834 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 GNPTABQ3T906 1256 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 UTP14CQ5TAP6 766 aaKnown RBP13.41□□□□□ -0.26
USP3-220ENST00000561381 PCNX4Q63HM2 1172 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 DBF4BQ8NFT6 615 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 GDPD5Q8WTR4 605 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 UHRF1Q96T88 793 aaPredicted RBP13.41□□□□□ -0.26
USP3-220ENST00000561381 ESYT1Q9BSJ8 1104 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 SETD4Q9NVD3 440 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 MTUS1Q9ULD2 1270 aa13.41□□□□□ -0.26
USP3-220ENST00000561381 LINC01553A4QN01 128 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 PIK3CDO00329 1044 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 STAM2O75886 525 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 CTSHP09668 335 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 SMARCA1P28370 1054 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 MCM5P33992 734 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 PDAP1Q13442 181 aaKnown RBP13.4□□□□□ -0.26
USP3-220ENST00000561381 CREB3L3Q68CJ9 461 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 CCDC82Q8N4S0 544 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 IL27Q8NEV9 243 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 CUL5Q93034 780 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 TMEM87BQ96K49 555 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 RAD9AQ99638 391 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 LZTS2Q9BRK4 669 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 MTA3Q9BTC8 594 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 USP26Q9BXU7 913 aa13.4□□□□□ -0.26
USP3-220ENST00000561381 SEC63Q9UGP8 760 aaKnown RBP13.4□□□□□ -0.26
USP3-220ENST00000561381 ST18O60284 1047 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 EFCAB14O75071 495 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 ATP9AO75110 1047 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 ITGB5P18084 799 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 GNAQP50148 359 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 NECTIN1Q15223 517 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 UBE2SQ16763 222 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 PLEKHG4Q58EX7 1191 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 MYOCDQ8IZQ8 938 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 PSTPIP2Q9H939 334 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 SUGCTQ9HAC7 445 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 MICAL3Q7RTP6 2002 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 EMSYQ7Z589 1322 aa13.39□□□□□ -0.27
USP3-220ENST00000561381 XIRP2A4UGR9 3374 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 LIFRP42702 1097 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 ERVK-21P61565 698 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 ADAM17P78536 824 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 ARHGAP4P98171 946 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 XRRA1Q6P2D8 792 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 NLRX1Q86UT6 975 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 LMBR1Q8WVP7 490 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 TGS1Q96RS0 853 aaKnown RBP13.38□□□□□ -0.27
USP3-220ENST00000561381 SENP7Q9BQF6 1050 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 ANO2Q9NQ90 1003 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 PKD2L1Q9P0L9 805 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 TRANK1O15050 2925 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 NCOR1O75376 2440 aa13.38□□□□□ -0.27
USP3-220ENST00000561381 AMHP03971 560 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 CALM1P0DP23 149 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 CALM2P0DP24 149 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 CALM3P0DP25 149 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 KCNA2P16389 499 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 RUFY4Q6ZNE9 571 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 TMTC3Q6ZXV5 915 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 MICU3Q86XE3 530 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 TCEANC2Q96MN5 208 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 C17orf80Q9BSJ5 609 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
USP3-220ENST00000561381 INSL6Q9Y581 213 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 SLC12A7Q9Y666 1083 aa13.37□□□□□ -0.27
USP3-220ENST00000561381 BRWD1Q9NSI6 2320 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.36□□□□□ -0.27
USP3-220ENST00000561381 GSTTP1A0A1W2PQM5 241 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 GNAT1P11488 350 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 MARK3P27448 753 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 TCF7P36402 384 aaPredicted RBP13.36□□□□□ -0.27
USP3-220ENST00000561381 HTRA4P83105 476 aaPredicted RBP13.36□□□□□ -0.27
USP3-220ENST00000561381 AAK1Q2M2I8 961 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 HEATR3Q7Z4Q2 680 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 SEPT8Q92599 483 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 HLA-CQ95604 372 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 GPRASP2Q96D09 838 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 PCDHA6Q9UN73 950 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 COG5Q9UP83 839 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 PCDHA8Q9Y5H6 950 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 UBIAD1Q9Y5Z9 338 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 SIP14410 1827 aa13.36□□□□□ -0.27
USP3-220ENST00000561381 KAT6AQ92794 2004 aa13.35□□□□□ -0.27
USP3-220ENST00000561381 CAND2O75155 1236 aa13.35□□□□□ -0.27
USP3-220ENST00000561381 UPP2O95045 317 aa13.35□□□□□ -0.27
USP3-220ENST00000561381 CHRNA1P02708 482 aa13.35□□□□□ -0.27
USP3-220ENST00000561381 MTMR1Q13613 665 aa13.35□□□□□ -0.27
USP3-220ENST00000561381 WWC2Q6AWC2 1192 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms