RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ZNF165P49910 485 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 NEDD9Q14511 834 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 DHX8Q14562 1220 aaKnown RBP11.52□□□□□ -0.57
USP3-219ENST00000561326 MCM6Q14566 821 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 UVSSAQ2YD98 709 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 ANO6Q4KMQ2 910 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 NAALADL2Q58DX5 795 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 CT47A1Q5JQC4 288 aaPredicted RBP11.52□□□□□ -0.57
USP3-219ENST00000561326 B3GNT9Q6UX72 402 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 SEPT14Q6ZU15 432 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 SMAP1Q8IYB5 467 aaPredicted RBP11.52□□□□□ -0.57
USP3-219ENST00000561326 GRAMD1CQ8IYS0 662 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 MLKLQ8NB16 471 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 STAMQ92783 540 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 ERCC4Q92889 916 aaPredicted RBP11.52□□□□□ -0.57
USP3-219ENST00000561326 CAPNS2Q96L46 248 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 NACC1Q96RE7 527 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 HSD17B14Q9BPX1 270 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 NUDT12Q9BQG2 462 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 UNC45AQ9H3U1 944 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 GRPEL1Q9HAV7 217 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 KAT6AQ92794 2004 aa11.52□□□□□ -0.57
USP3-219ENST00000561326 POTEB3A0JP26 581 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 DDX39AO00148 427 aaKnown RBP11.51□□□□□ -0.57
USP3-219ENST00000561326 ATP9AO75110 1047 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 MED24O75448 989 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 RGS20O76081 388 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 SLITRK3O94933 977 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 RPN1P04843 607 aaKnown RBP11.51□□□□□ -0.57
USP3-219ENST00000561326 SSBP05455 408 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP3-219ENST00000561326 PSAPP07602 524 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 SPATA31C1P0DKV0 1188 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 XRCC6P12956 609 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP3-219ENST00000561326 CYP4A11Q02928 519 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 ITGB3BPQ13352 177 aaPredicted RBP11.51□□□□□ -0.57
USP3-219ENST00000561326 GRB14Q14449 540 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 ZNF792Q3KQV3 632 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 POTEBQ6S5H4 581 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 FAM200AQ8TCP9 573 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 MORC4Q8TE76 937 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 DYDC2Q96IM9 177 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 RBSNQ9H1K0 784 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 R3HDMLQ9H3Y0 253 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 ZSWIM4Q9H7M6 989 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 BLOC1S4Q9NUP1 217 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 SLC9A2Q9UBY0 812 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 PCDHA10Q9Y5I2 948 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 ASTN1O14525 1302 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 ADGRA2Q96PE1 1338 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 ZNF236Q9UL36 1845 aa11.51□□□□□ -0.57
USP3-219ENST00000561326 PVALEFA0A1B0GWK0 134 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 SMTNL1A8MU46 457 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 BECN2A8MW95 431 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 COBLO75128 1261 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 EYA4O95677 639 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 PLA2G4BP0C869 781 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 KCNA2P16389 499 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 MAP2K2P36507 400 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 QARSP47897 775 aaKnown RBP11.5□□□□□ -0.57
USP3-219ENST00000561326 ASIC1P78348 528 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 CRHR2Q13324 411 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 CUL4BQ13620 913 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 MORC3Q14149 939 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 CTTNQ14247 550 aaKnown RBP11.5□□□□□ -0.57
USP3-219ENST00000561326 KCNB1Q14721 858 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 ISM2Q6H9L7 571 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 CNNM4Q6P4Q7 775 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 POTEGQ6S5H5 508 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 MSL3Q8N5Y2 521 aaKnown RBP11.5□□□□□ -0.57
USP3-219ENST00000561326 SYT2Q8N9I0 419 aaPredicted RBP11.5□□□□□ -0.57
USP3-219ENST00000561326 MTRQ99707 1265 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 TRIM9Q9C026 710 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 DNAJC25Q9H1X3 360 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 BLZF1Q9H2G9 400 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 JPH1Q9HDC5 661 aaPredicted RBP11.5□□□□□ -0.57
USP3-219ENST00000561326 VTA1Q9NP79 307 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 RGL1Q9NZL6 768 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 MAN1B1Q9UKM7 699 aa11.5□□□□□ -0.57
USP3-219ENST00000561326 LRRC37A2A6NM11 1700 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 E9PMD0 336 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 GOLGA6L19H0YKK7 550 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 KRT18P05783 430 aaKnown RBP11.49□□□□□ -0.57
USP3-219ENST00000561326 PPP1R2P41236 205 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 PSMC5P62195 406 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 TPM4P67936 248 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 MAP2K5Q13163 448 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 PSMD2Q13200 908 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 STIM1Q13586 685 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 TTLL4Q14679 1199 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 KIF22Q14807 665 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 ECM1Q16610 540 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 ZNF658Q5TYW1 1059 aaPredicted RBP11.49□□□□□ -0.57
USP3-219ENST00000561326 MIS18BP1Q6P0N0 1132 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 MAMDC4Q6UXC1 1216 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 ARMCX2Q7L311 632 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 OTUD6AQ7L8S5 288 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 EEPD1Q7L9B9 569 aa11.49□□□□□ -0.57
USP3-219ENST00000561326 CCDC65Q8IXS2 484 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms