RNA–Protein interactions for RNA: ENST00000561255.5

CRTC3-213, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 520 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-213ENST00000561255 EHMT1Q9H9B1 1298 aa14□□□□□ -0.17
CRTC3-213ENST00000561255 JMJD4Q9H9V9 463 aa14□□□□□ -0.17
CRTC3-213ENST00000561255 SETD4Q9NVD3 440 aa14□□□□□ -0.17
CRTC3-213ENST00000561255 ZNF292O60281 2723 aa14□□□□□ -0.17
CRTC3-213ENST00000561255 SALL3Q9BXA9 1300 aa13.99□□□□□ -0.17
CRTC3-213ENST00000561255 TTC3P53804 2025 aa13.99□□□□□ -0.17
CRTC3-213ENST00000561255 ENPP3O14638 875 aa13.99□□□□□ -0.17
CRTC3-213ENST00000561255 NUBP1P53384 320 aa13.99□□□□□ -0.17
CRTC3-213ENST00000561255 TBC1D10CQ8IV04 446 aa13.99□□□□□ -0.17
CRTC3-213ENST00000561255 ZKSCAN3Q9BRR0 538 aa13.99□□□□□ -0.17
CRTC3-213ENST00000561255 AMNQ9BXJ7 453 aa13.99□□□□□ -0.17
CRTC3-213ENST00000561255 KAT14Q9H8E8 782 aa13.99□□□□□ -0.17
CRTC3-213ENST00000561255 PROB1E7EW31 1015 aa13.98□□□□□ -0.17
CRTC3-213ENST00000561255 NOP56O00567 594 aaKnown RBP13.98□□□□□ -0.17
CRTC3-213ENST00000561255 DHX16O60231 1041 aaKnown RBP13.98□□□□□ -0.17
CRTC3-213ENST00000561255 DGKIO75912 1065 aa13.98□□□□□ -0.17
CRTC3-213ENST00000561255 CHRNA1P02708 482 aa13.98□□□□□ -0.17
CRTC3-213ENST00000561255 PARP1P09874 1014 aaKnown RBP13.98□□□□□ -0.17
CRTC3-213ENST00000561255 CCND2P30279 289 aa13.98□□□□□ -0.17
CRTC3-213ENST00000561255 IQCA1Q86XH1 822 aa13.98□□□□□ -0.17
CRTC3-213ENST00000561255 IL31RAQ8NI17 732 aa13.98□□□□□ -0.17
CRTC3-213ENST00000561255 SPPL3Q8TCT6 385 aa13.98□□□□□ -0.17
CRTC3-213ENST00000561255 ATOH1Q92858 354 aaPredicted RBP13.98□□□□□ -0.17
CRTC3-213ENST00000561255 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.17
CRTC3-213ENST00000561255 ASIC4Q96FT7 647 aa13.98□□□□□ -0.17
CRTC3-213ENST00000561255 FAM227BQ96M60 508 aa13.98□□□□□ -0.17
CRTC3-213ENST00000561255 PHF7Q9BWX1 381 aaPredicted RBP13.98□□□□□ -0.17
CRTC3-213ENST00000561255 VAT1LQ9HCJ6 419 aa13.98□□□□□ -0.17
CRTC3-213ENST00000561255 FAM86C1Q9NVL1 165 aa13.98□□□□□ -0.17
CRTC3-213ENST00000561255 NEDD4P46934 1319 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 A0A0D9SFI3 127 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 GHRP10912 638 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 DNAJB1P25685 340 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 AVPR2P30518 371 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 VCPP55072 806 aaKnown RBP13.97□□□□□ -0.17
CRTC3-213ENST00000561255 ARHGAP4P98171 946 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 NEDD9Q14511 834 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 LPIN1Q14693 890 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 METTL7BQ6UX53 244 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 ADGRD2Q7Z7M1 963 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 LMBR1Q8WVP7 490 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 GPR20Q99678 358 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 BCAS3Q9H6U6 928 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 RCAN3Q9UKA8 241 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 ZNF215Q9UL58 517 aaPredicted RBP13.97□□□□□ -0.17
CRTC3-213ENST00000561255 USP15Q9Y4E8 981 aaPredicted RBP13.97□□□□□ -0.17
CRTC3-213ENST00000561255 PLXNA3P51805 1871 aa13.97□□□□□ -0.17
CRTC3-213ENST00000561255 FAM186AA6NE01 2351 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 NRCAMQ92823 1304 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 CSPG5O95196 566 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 GLP2RO95838 553 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 ITGB1P05556 798 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 ATF7P17544 494 aaPredicted RBP13.96□□□□□ -0.17
CRTC3-213ENST00000561255 HOXA13P31271 388 aaPredicted RBP13.96□□□□□ -0.17
CRTC3-213ENST00000561255 ICAM3P32942 547 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 MGAT3Q09327 533 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 GNPTABQ3T906 1256 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 TAF2Q6P1X5 1199 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 ZNF589Q86UQ0 364 aaPredicted RBP13.96□□□□□ -0.17
CRTC3-213ENST00000561255 CMTR2Q8IYT2 770 aaKnown RBP13.96□□□□□ -0.17
CRTC3-213ENST00000561255 CRIPAKQ8N1N5 446 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 MTMR8Q96EF0 704 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 ZSCAN10Q96SZ4 725 aaPredicted RBP13.96□□□□□ -0.17
CRTC3-213ENST00000561255 MRPL42Q9Y6G3 142 aaKnown RBP13.96□□□□□ -0.17
CRTC3-213ENST00000561255 KIAA1671Q9BY89 1806 aa13.96□□□□□ -0.17
CRTC3-213ENST00000561255 KAT6AQ92794 2004 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 ZBTB5O15062 677 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 PPP1R11O60927 126 aaPredicted RBP13.95□□□□□ -0.18
CRTC3-213ENST00000561255 KDM4AO75164 1064 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 STAM2O75886 525 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 NRIP1P48552 1158 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 PTPN21Q16825 1174 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 CYFIP1Q7L576 1253 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 ENAHQ8N8S7 591 aaPredicted RBP13.95□□□□□ -0.18
CRTC3-213ENST00000561255 KLHL23Q8NBE8 558 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 POF1BQ8WVV4 589 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 SUSD6Q92537 303 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 RPGRIP1Q96KN7 1286 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 INPP4AQ96PE3 977 aaPredicted RBP13.95□□□□□ -0.18
CRTC3-213ENST00000561255 BARX2Q9UMQ3 279 aaPredicted RBP13.95□□□□□ -0.18
CRTC3-213ENST00000561255 PCDHA1Q9Y5I3 950 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 GVINP1Q7Z2Y8 2422 aa13.95□□□□□ -0.18
CRTC3-213ENST00000561255 FRYLO94915 3013 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 FSD2A1L4K1 749 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 TRIM6-TRIM34B2RNG4 842 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 GCOM1H8Y6P7 765 aaPredicted RBP13.94□□□□□ -0.18
CRTC3-213ENST00000561255 ZNF213O14771 459 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 POLR2MP0CAP2 368 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 MRPS9P82933 396 aaKnown RBP13.94□□□□□ -0.18
CRTC3-213ENST00000561255 TRAF1Q13077 416 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 FBXO47Q5MNV8 452 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 RUFY4Q6ZNE9 571 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 TSHZ1Q6ZSZ6 1077 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 RSPH3Q86UC2 560 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 TRIM50Q86XT4 487 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 ZFP91Q96JP5 570 aaPredicted RBP13.94□□□□□ -0.18
CRTC3-213ENST00000561255 SUPT16HQ9Y5B9 1047 aaKnown RBP13.94□□□□□ -0.18
CRTC3-213ENST00000561255 LAMA4Q16363 1823 aa13.94□□□□□ -0.18
CRTC3-213ENST00000561255 DMXL1Q9Y485 3027 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms