RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 UBE2OQ9C0C9 1292 aaKnown RBP17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 JPH1Q9HDC5 661 aaPredicted RBP17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 IPO5O00410 1097 aaKnown RBP17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 ST18O60284 1047 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 SUPT20HL2P0C7V6 817 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 ACTR2P61160 394 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 ZNF200P98182 395 aaPredicted RBP17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 SETQ01105 290 aaPredicted RBP17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 NR5A1Q13285 461 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 NONOQ15233 471 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 INF2Q27J81 1249 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 UTP14CQ5TAP6 766 aaKnown RBP17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 KRT40Q6A162 431 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 VWCEQ96DN2 955 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 TMX3Q96JJ7 454 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 SDF4Q9BRK5 362 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 PPP1R12CQ9BZL4 782 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 WNT8AQ9H1J5 351 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 HIPK3Q9H422 1215 aa17.35■□□□□ 0.37
SNRPA1-213ENST00000560856 IGKV6D-21A0A0A0MT36 114 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 FAM205CA6NFA0 338 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 MSH4O15457 936 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 TDP2O95551 362 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 MMP1P03956 469 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 TRIP12Q14669 1992 aaPredicted RBP17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 PTGISQ16647 500 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 Q4G0T1 1027 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 MOXD1Q6UVY6 613 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 C16orf59Q7L2K0 433 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 C7orf31Q8N865 590 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 DHX38Q92620 1227 aaKnown RBP17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 RNPEPQ9H4A4 650 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 LAMA3Q16787 3333 aa17.34■□□□□ 0.37
SNRPA1-213ENST00000560856 EMSYQ7Z589 1322 aa17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 BTBD18B2RXH4 712 aa17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 SMIM10L2AP0DMW4 78 aa17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 SMIM10L2BP0DMW5 78 aa17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 KRT2P35908 639 aa17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 FOSBP53539 338 aa17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 ADAM17P78536 824 aa17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 HMGN5P82970 282 aaKnown RBP17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 ABHD15Q6UXT9 468 aa17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 SLC5A5Q92911 643 aa17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 ZNF577Q9BSK1 485 aa17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 TBC1D22BQ9NU19 505 aa17.33■□□□□ 0.36
SNRPA1-213ENST00000560856 CCDC194A0A1B0GVG4 234 aa17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 DDX39AO00148 427 aaKnown RBP17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 CSF2RAP15509 400 aa17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 FPGSQ05932 587 aa17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 RBL2Q08999 1139 aa17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 TRIM71Q2Q1W2 868 aaKnown RBP17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 C9orf50Q5SZB4 431 aa17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 PIK3AP1Q6ZUJ8 805 aa17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 DIS3L2Q8IYB7 885 aaKnown RBP17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 TDHQ8IZJ6 230 aa17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 WNT8BQ93098 351 aa17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 GJA10Q969M2 543 aa17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 SMARCAD1Q9H4L7 1026 aa17.32■□□□□ 0.36
SNRPA1-213ENST00000560856 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 MCM2P49736 904 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 CCL23P55773 120 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 SHHQ15465 462 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 PPP4R3AQ6IN85 833 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 ZNF746Q6NUN9 644 aaPredicted RBP17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 B3GNT9Q6UX72 402 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 PLPPR4Q7Z2D5 763 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 NEK8Q86SG6 692 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 FBXO18Q8NFZ0 1043 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 ETNPPLQ8TBG4 499 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 RIT2Q99578 217 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 SETD4Q9NVD3 440 aa17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 ZNF215Q9UL58 517 aaPredicted RBP17.31■□□□□ 0.36
SNRPA1-213ENST00000560856 SLC37A4O43826 429 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 PSMD10O75832 226 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 FXR1P51114 621 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 GUCY1B3Q02153 619 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 PTK7Q13308 1070 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 GPNMBQ14956 572 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 LETM2Q2VYF4 491 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 SERINC5Q86VE9 423 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 CCDC60Q8IWA6 550 aaPredicted RBP17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 TMEM199Q8N511 208 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 GLG1Q92896 1179 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 SCLYQ96I15 445 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 C8orf76Q96K31 380 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 ERAP1Q9NZ08 941 aa17.3■□□□□ 0.36
SNRPA1-213ENST00000560856 C17orf102A2RUQ5 167 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 SOX1O00570 391 aaPredicted RBP17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 WNT7AO00755 349 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 TREHO43280 583 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 IQCF3P0C7M6 154 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 ATP4AP20648 1035 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 MARK3P27448 753 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 STAT5BP51692 787 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 KRT76Q01546 638 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 PPIGQ13427 754 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 BFSP2Q13515 415 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 TRIM29Q14134 588 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 PLCB4Q15147 1175 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 LRIT3Q3SXY7 679 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms