RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PNMA1Q8ND90 353 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 LINC01599Q8WXQ3 324 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 HELLSQ9NRZ9 838 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 SETD4Q9NVD3 440 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 PLAGL2Q9UPG8 496 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 RWDD3Q9Y3V2 267 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 USP15Q9Y4E8 981 aaPredicted RBP11.55□□□□□ -0.56
TPM1-225ENST00000560679 PCDHGC5Q9Y5F6 944 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 DNAH14Q0VDD8 3507 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 CHRNA1P02708 482 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 GHRP10912 638 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 HOXA13P31271 388 aaPredicted RBP11.54□□□□□ -0.56
TPM1-225ENST00000560679 MGAT3Q09327 533 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 COASYQ13057 564 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 SEMA3FQ13275 785 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 ASPRV1Q53RT3 343 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 RUFY4Q6ZNE9 571 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 DGKHQ86XP1 1220 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 EFHBQ8N7U6 833 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 LMBR1Q8WVP7 490 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 PLVAPQ9BX97 442 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 EHMT1Q9H9B1 1298 aa11.54□□□□□ -0.56
TPM1-225ENST00000560679 BARX2Q9UMQ3 279 aaPredicted RBP11.54□□□□□ -0.56
TPM1-225ENST00000560679 MRPL42Q9Y6G3 142 aaKnown RBP11.54□□□□□ -0.56
TPM1-225ENST00000560679 ITGB1P05556 798 aa11.53□□□□□ -0.56
TPM1-225ENST00000560679 TGFB3P10600 412 aa11.53□□□□□ -0.56
TPM1-225ENST00000560679 PCP11498 1178 aaKnown RBP11.53□□□□□ -0.56
TPM1-225ENST00000560679 IRX6P78412 446 aaPredicted RBP11.53□□□□□ -0.56
TPM1-225ENST00000560679 SIGLEC14Q08ET2 396 aa11.53□□□□□ -0.56
TPM1-225ENST00000560679 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
TPM1-225ENST00000560679 LPIN1Q14693 890 aa11.53□□□□□ -0.56
TPM1-225ENST00000560679 KCNV1Q6PIU1 500 aa11.53□□□□□ -0.56
TPM1-225ENST00000560679 MFSD6Q6ZSS7 791 aa11.53□□□□□ -0.56
TPM1-225ENST00000560679 CRIPAKQ8N1N5 446 aa11.53□□□□□ -0.56
TPM1-225ENST00000560679 STAG2Q8N3U4 1231 aa11.53□□□□□ -0.56
TPM1-225ENST00000560679 SPPL3Q8TCT6 385 aa11.53□□□□□ -0.56
TPM1-225ENST00000560679 P2RX5Q93086 422 aa11.53□□□□□ -0.56
TPM1-225ENST00000560679 RIF1Q5UIP0 2472 aaKnown RBP11.53□□□□□ -0.56
TPM1-225ENST00000560679 GVINP1Q7Z2Y8 2422 aa11.52□□□□□ -0.56
TPM1-225ENST00000560679 WDR87Q6ZQQ6 2873 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 ENPP3O14638 875 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 DGKIO75912 1065 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 PDGFBP01127 241 aaPredicted RBP11.52□□□□□ -0.57
TPM1-225ENST00000560679 CCND2P30279 289 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 AVPR2P30518 371 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 NRIP1P48552 1158 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 ARHGAP4P98171 946 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 RBM10P98175 930 aaKnown RBP11.52□□□□□ -0.57
TPM1-225ENST00000560679 NMIQ13287 307 aaPredicted RBP11.52□□□□□ -0.57
TPM1-225ENST00000560679 SLC35G1Q2M3R5 365 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 MCMDC2Q4G0Z9 681 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 METTL7BQ6UX53 244 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 ASCL5Q7RTU5 278 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 ENAHQ8N8S7 591 aaPredicted RBP11.52□□□□□ -0.57
TPM1-225ENST00000560679 VN1R2Q8NFZ6 395 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 SUSD6Q92537 303 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 ESR2Q92731 530 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 EVI5LQ96CN4 794 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 MTMR8Q96EF0 704 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 GPR20Q99678 358 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 PHF7Q9BWX1 381 aaPredicted RBP11.52□□□□□ -0.57
TPM1-225ENST00000560679 KAT14Q9H8E8 782 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 MLXIPQ9HAP2 919 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 VAT1LQ9HCJ6 419 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 PPP4R2Q9NY27 417 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 RCAN3Q9UKA8 241 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 FRMPD4Q14CM0 1322 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 FAM186AA6NE01 2351 aa11.52□□□□□ -0.57
TPM1-225ENST00000560679 DMXL1Q9Y485 3027 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 PTPRZ1P23471 2315 aaPredicted RBP11.51□□□□□ -0.57
TPM1-225ENST00000560679 PROB1E7EW31 1015 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 H0Y858 1186 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 DHX16O60231 1041 aaKnown RBP11.51□□□□□ -0.57
TPM1-225ENST00000560679 KDM4AO75164 1064 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 PARP1P09874 1014 aaKnown RBP11.51□□□□□ -0.57
TPM1-225ENST00000560679 GNAT1P11488 350 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 ICAM3P32942 547 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 MRPS9P82933 396 aaKnown RBP11.51□□□□□ -0.57
TPM1-225ENST00000560679 FOXK2Q01167 660 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 FBXO47Q5MNV8 452 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 CYFIP1Q7L576 1253 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 RBM23Q86U06 439 aaKnown RBP11.51□□□□□ -0.57
TPM1-225ENST00000560679 KLHL23Q8NBE8 558 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 POF1BQ8WVV4 589 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 ATOH1Q92858 354 aaPredicted RBP11.51□□□□□ -0.57
TPM1-225ENST00000560679 RPGRIP1Q96KN7 1286 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 INPP4AQ96PE3 977 aaPredicted RBP11.51□□□□□ -0.57
TPM1-225ENST00000560679 AMNQ9BXJ7 453 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 USP26Q9BXU7 913 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 TLR9Q9NR96 1032 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 PCDHB15Q9Y5E8 787 aa11.51□□□□□ -0.57
TPM1-225ENST00000560679 NOP56O00567 594 aaKnown RBP11.5□□□□□ -0.57
TPM1-225ENST00000560679 PTPN21Q16825 1174 aa11.5□□□□□ -0.57
TPM1-225ENST00000560679 PAN2Q504Q3 1202 aaKnown RBP11.5□□□□□ -0.57
TPM1-225ENST00000560679 CMTR2Q8IYT2 770 aaKnown RBP11.5□□□□□ -0.57
TPM1-225ENST00000560679 PPP2R3CQ969Q6 453 aa11.5□□□□□ -0.57
TPM1-225ENST00000560679 ZSCAN10Q96SZ4 725 aaPredicted RBP11.5□□□□□ -0.57
TPM1-225ENST00000560679 RNF41Q9H4P4 317 aaPredicted RBP11.5□□□□□ -0.57
TPM1-225ENST00000560679 AGO3Q9H9G7 860 aaKnown RBP11.5□□□□□ -0.57
TPM1-225ENST00000560679 MAP3K20Q9NYL2 800 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms