RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 UBA1P22314 1058 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 NRIP1P48552 1158 aa10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 HSD17B4P51659 736 aa10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 BTG3Q14201 252 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 RBM23Q86U06 439 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 VSIG10LQ86VR7 867 aa10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 OTUD7AQ8TE49 926 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 RPGRIP1Q96KN7 1286 aa10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 PDCD2LQ9BRP1 358 aa10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 ZKSCAN3Q9BRR0 538 aa10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 CHMP4BQ9H444 224 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 EHMT1Q9H9B1 1298 aa10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 MLXIPQ9HAP2 919 aa10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 BARX2Q9UMQ3 279 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 SUPT16HQ9Y5B9 1047 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 MRPL42Q9Y6G3 142 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 FANCMQ8IYD8 2048 aa10.44□□□□□ -0.74
RABGGTA-217ENST00000560521 PRR23AA6NEV1 266 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 TGFB3P10600 412 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 ICAM3P32942 547 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 RBM10P98175 930 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 HNRNPUQ00839 825 aaKnown RBP eCLIP10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 GHRHRQ02643 423 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 PGM5Q15124 567 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 NAALADL2Q58DX5 795 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 STOX1Q6ZVD7 989 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 ERMP1Q7Z2K6 904 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 RTN4RL1Q86UN2 441 aaPredicted RBP10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 CRIPAKQ8N1N5 446 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 KLHL23Q8NBE8 558 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 IL31RAQ8NI17 732 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 POF1BQ8WVV4 589 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 SUSD6Q92537 303 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 RIPOR3Q96MK2 946 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 USP26Q9BXU7 913 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 JMJD4Q9H9V9 463 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 VAT1LQ9HCJ6 419 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 TRPC6Q9Y210 931 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 TELO2Q9Y4R8 837 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 PCDHGC5Q9Y5F6 944 aa10.43□□□□□ -0.74
RABGGTA-217ENST00000560521 GALR2O43603 387 aaPredicted RBP10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 GHRP10912 638 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 GNAT1P11488 350 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 ATF7P17544 494 aaPredicted RBP10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 NBL1P41271 181 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 NUBP1P53384 320 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 HAND2P61296 217 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 MGAT3Q09327 533 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 LPIN1Q14693 890 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 PTPN21Q16825 1174 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 MFSD6Q6ZSS7 791 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 DGKHQ86XP1 1220 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 LINC01599Q8WXQ3 324 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 PPP2R3CQ969Q6 453 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 DNAH14Q0VDD8 3507 aa10.42□□□□□ -0.74
RABGGTA-217ENST00000560521 MYH9P35579 1960 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 PER2O15055 1255 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 HOXA13P31271 388 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 ARHGAP4P98171 946 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 C20orf194Q5TEA3 1177 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 RUFY4Q6ZNE9 571 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 MIER1Q8N108 512 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 PNMA1Q8ND90 353 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 VN1R2Q8NFZ6 395 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 ATP8B4Q8TF62 1192 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 LMBR1Q8WVP7 490 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 HELLSQ9NRZ9 838 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 MAP3K20Q9NYL2 800 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 CACNA1AO00555 2505 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 C2orf16Q68DN1 1984 aa10.41□□□□□ -0.74
RABGGTA-217ENST00000560521 DENND4AQ7Z401 1863 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 ZMYM6O95789 1325 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 CCDC171Q6TFL3 1326 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 PPP1R11O60927 126 aaPredicted RBP10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 PPFIA3O75145 1194 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 KDM4AO75164 1064 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 ID4P47928 161 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 FBXO47Q5MNV8 452 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 CYFIP1Q7L576 1253 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 TRIM50Q86XT4 487 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 TBC1D10CQ8IV04 446 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 CMTR2Q8IYT2 770 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 TMEM105Q8N8V8 129 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 FAM227BQ96M60 508 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 GPR20Q99678 358 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 AMNQ9BXJ7 453 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 S1PR5Q9H228 398 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 TLE6Q9H808 572 aa10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 AGO3Q9H9G7 860 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-217ENST00000560521 NEDD4P46934 1319 aa10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 NRCAMQ92823 1304 aa10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 A0A0D9SFI3 127 aa10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 NOP56O00567 594 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 DHX16O60231 1041 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 PCP11498 1178 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 CCND2P30279 289 aa10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 GATMP50440 423 aa10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 MRPS9P82933 396 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 SEMA3FQ13275 785 aa10.39□□□□□ -0.75
RABGGTA-217ENST00000560521 KCNC3Q14003 757 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms