RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 B4DLN1 442 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 CUTAO60888 179 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 CYBAP13498 195 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 SMPD1P17405 629 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 HOXD10P28358 340 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 ADCYAP1R1P41586 468 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 CACNB2Q08289 660 aaPredicted RBP10.59□□□□□ -0.71
HERC1-206ENST00000559996 SNW1Q13573 536 aaKnown RBP10.59□□□□□ -0.71
HERC1-206ENST00000559996 NFKBIBQ15653 356 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 ECM1Q16610 540 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 GJC2Q5T442 439 aaPredicted RBP10.59□□□□□ -0.71
HERC1-206ENST00000559996 MAP3K21Q5TCX8 1036 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 RESP18Q5W5W9 173 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 DTHD1Q6ZMT9 781 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 NLRX1Q86UT6 975 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 SLFN12Q8IYM2 578 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 PXYLP1Q8TE99 480 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 FERMT2Q96AC1 680 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 GBP4Q96PP9 640 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 BEGAINQ9BUH8 593 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 UNC45AQ9H3U1 944 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 PCDHA12Q9UN75 941 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.58□□□□□ -0.72
HERC1-206ENST00000559996 GSTTP1A0A1W2PQM5 241 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 ADCY3O60266 1144 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 FARP2O94887 1054 aaPredicted RBP10.58□□□□□ -0.72
HERC1-206ENST00000559996 SPATA31C1P0DKV0 1188 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 HSPA1AP0DMV8 641 aaKnown RBP10.58□□□□□ -0.72
HERC1-206ENST00000559996 HSPA1BP0DMV9 641 aaKnown RBP10.58□□□□□ -0.72
HERC1-206ENST00000559996 ELNP15502 786 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 UBA1P22314 1058 aaKnown RBP10.58□□□□□ -0.72
HERC1-206ENST00000559996 CMA1P23946 247 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 LONP1P36776 959 aaKnown RBP10.58□□□□□ -0.72
HERC1-206ENST00000559996 PRMT2P55345 433 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 CCDC144BQ3MJ40 725 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 GNPTABQ3T906 1256 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 CELF3Q5SZQ8 465 aaKnown RBP10.58□□□□□ -0.72
HERC1-206ENST00000559996 IQSEC1Q6DN90 963 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 GPT2Q8TD30 523 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 HSD17B14Q9BPX1 270 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 KRTAP3-3Q9BYR6 98 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 KRTAP3-2Q9BYR7 98 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 TBC1D22BQ9NU19 505 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 PKD2L1Q9P0L9 805 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 PTPN22Q9Y2R2 807 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 TRIM17Q9Y577 477 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 PTCH2Q9Y6C5 1203 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 HTTP42858 3142 aa10.58□□□□□ -0.72
HERC1-206ENST00000559996 IGKV6D-21A0A0A0MT36 114 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 A0A1B0GVL5 298 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 CTAGE5O15320 804 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 SLITRK3O94933 977 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 STBD1O95210 358 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 TXNP10599 105 aaKnown RBP10.57□□□□□ -0.72
HERC1-206ENST00000559996 LIG1P18858 919 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 ME1P48163 572 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 LBX1P52954 281 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 ARHGAP1Q07960 439 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 HSDL1Q3SXM5 330 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 DUSP28Q4G0W2 176 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 HYIQ5T013 277 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 LRCH2Q5VUJ6 765 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 KCNV1Q6PIU1 500 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 ABHD15Q6UXT9 468 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 CYFIP1Q7L576 1253 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 TRMT44Q8IYL2 757 aaKnown RBP10.57□□□□□ -0.72
HERC1-206ENST00000559996 SCFD2Q8WU76 684 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 SYMPKQ92797 1274 aaKnown RBP10.57□□□□□ -0.72
HERC1-206ENST00000559996 CDHR1Q96JP9 859 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 PNMA5Q96PV4 448 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 PCYT2Q99447 389 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 CCSER1Q9C0I3 900 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 WRAP73Q9P2S5 460 aaPredicted RBP10.57□□□□□ -0.72
HERC1-206ENST00000559996 NRBP1Q9UHY1 535 aa10.57□□□□□ -0.72
HERC1-206ENST00000559996 DDX39AO00148 427 aaKnown RBP10.56□□□□□ -0.72
HERC1-206ENST00000559996 SORBS3O60504 671 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 GAS7O60861 476 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 MED24O75448 989 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 GGPS1O95749 300 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 ATP4AP20648 1035 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 CCND3P30281 292 aaPredicted RBP10.56□□□□□ -0.72
HERC1-206ENST00000559996 NDUFA8P51970 172 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 UBE2HP62256 183 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 NKX3-2P78367 333 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 GRB10Q13322 594 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 NEDD9Q14511 834 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 TTLL4Q14679 1199 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 EPHA7Q15375 998 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 E2F4Q16254 413 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 NAALADL2Q58DX5 795 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 ZNF746Q6NUN9 644 aaPredicted RBP10.56□□□□□ -0.72
HERC1-206ENST00000559996 METTL7BQ6UX53 244 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 CATSPER3Q86XQ3 398 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 FMR1NBQ8N0W7 255 aaPredicted RBP10.56□□□□□ -0.72
HERC1-206ENST00000559996 EMID1Q96A84 441 aaPredicted RBP10.56□□□□□ -0.72
HERC1-206ENST00000559996 AK8Q96MA6 479 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 MPHOSPH6Q99547 160 aaKnown RBP10.56□□□□□ -0.72
HERC1-206ENST00000559996 TEKT3Q9BXF9 490 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 RGL1Q9NZL6 768 aa10.56□□□□□ -0.72
HERC1-206ENST00000559996 SLC9A2Q9UBY0 812 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms