RNA–Protein interactions for RNA: ENST00000558651.5

HMG20A-205, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-205ENST00000558651 SUV39H1O43463 412 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 DNAJA1P31689 397 aaKnown RBP4.31□□□□□ -1.72
HMG20A-205ENST00000558651 GLRBP48167 497 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 TUSC3Q13454 348 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 PAN2Q504Q3 1202 aaKnown RBP4.31□□□□□ -1.72
HMG20A-205ENST00000558651 MRM1Q6IN84 353 aaKnown RBP4.31□□□□□ -1.72
HMG20A-205ENST00000558651 DENND5AQ6IQ26 1287 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 TICAM2Q86XR7 235 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 MBD6Q96DN6 1003 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 SGSM3Q96HU1 749 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 ZFYVE21Q9BQ24 234 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 SSBP3Q9BWW4 388 aaPredicted RBP4.31□□□□□ -1.72
HMG20A-205ENST00000558651 KRTAP3-1Q9BYR8 98 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 ZNF408Q9H9D4 720 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 HSPBP1Q9NZL4 362 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 ZFP69BQ9UJL9 534 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 ADAM29Q9UKF5 820 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 DSEQ9UL01 958 aa4.31□□□□□ -1.72
HMG20A-205ENST00000558651 FAM47E-STBD1D6RA91 191 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 H0Y858 1186 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 CYR61O00622 381 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 GPR42O15529 346 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 PRODHO43272 600 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 ZNF623O75123 536 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 CKMP06732 381 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 COL6A2P12110 1019 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 FAHP16930 419 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 GRIA2P42262 883 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 IFRD2Q12894 506 aaPredicted RBP4.3□□□□□ -1.72
HMG20A-205ENST00000558651 SKIDA1Q1XH10 827 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 DPP8Q6V1X1 898 aaPredicted RBP4.3□□□□□ -1.72
HMG20A-205ENST00000558651 NSMFQ6X4W1 530 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 Q6ZUG5 572 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 OTOP3Q7RTS5 596 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.3□□□□□ -1.72
HMG20A-205ENST00000558651 IFNL3Q8IZI9 196 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 LRRC47Q8N1G4 583 aaKnown RBP4.3□□□□□ -1.72
HMG20A-205ENST00000558651 DTX3Q8N9I9 347 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 NUDT10Q8NFP7 164 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 MICAL1Q8TDZ2 1067 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 NUDT11Q96G61 164 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 C1orf159Q96HA4 380 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 IPO9Q96P70 1041 aaKnown RBP4.3□□□□□ -1.72
HMG20A-205ENST00000558651 SORCS2Q96PQ0 1159 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 LMF1Q96S06 567 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 ZNF341Q9BYN7 854 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 SEC61A2Q9H9S3 476 aa4.3□□□□□ -1.72
HMG20A-205ENST00000558651 TRAV20A0A0B4J274 112 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 DLX3O60479 287 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 CLSTN1O94985 981 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 AMHP03971 560 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 TCF3P15923 654 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 GPR85P60893 370 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 DDR2Q16832 855 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 PHF19Q5T6S3 580 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 LBX2Q6XYB7 198 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 ANKS3Q6ZW76 656 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 REXO1L1PQ8IX06 675 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 STPG3Q8N7X2 389 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 WDR48Q8TAF3 677 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 UHMK1Q8TAS1 419 aaKnown RBP4.29□□□□□ -1.72
HMG20A-205ENST00000558651 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMG20A-205ENST00000558651 HNRNPLLQ8WVV9 542 aaKnown RBP4.29□□□□□ -1.72
HMG20A-205ENST00000558651 CLEC4DQ8WXI8 215 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 LRRC37BQ96QE4 947 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 MRIQ9BWK5 157 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 TRIM55Q9BYV6 548 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 RBPJLQ9UBG7 517 aa4.29□□□□□ -1.72
HMG20A-205ENST00000558651 U2SURPO15042 1029 aaKnown RBP4.28□□□□□ -1.72
HMG20A-205ENST00000558651 MSCO60682 206 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 SOD2P04179 222 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 FGRP09769 529 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 FGFR1P11362 822 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 PABPC1P11940 636 aaKnown RBP4.28□□□□□ -1.72
HMG20A-205ENST00000558651 PFKPQ01813 784 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 USP10Q14694 798 aaKnown RBP4.28□□□□□ -1.72
HMG20A-205ENST00000558651 PRKD1Q15139 912 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-205ENST00000558651 CD276Q5ZPR3 534 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 KCTD1Q719H9 257 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 ZFPM1Q8IX07 1006 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 RBM12BQ8IXT5 1001 aaKnown RBP4.28□□□□□ -1.72
HMG20A-205ENST00000558651 NLGN4XQ8N0W4 816 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 DNERQ8NFT8 737 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 PKNOX2Q96KN3 472 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 PTPN18Q99952 460 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 CARD11Q9BXL7 1154 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 CD248Q9HCU0 757 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 ARHGAP28Q9P2N2 729 aa4.28□□□□□ -1.72
HMG20A-205ENST00000558651 PPARGC1AQ9UBK2 798 aaKnown RBP4.28□□□□□ -1.72
HMG20A-205ENST00000558651 PPP1R1BQ9UD71 204 aaPredicted RBP4.28□□□□□ -1.72
HMG20A-205ENST00000558651 PATE3B3GLJ2 98 aa4.27□□□□□ -1.73
HMG20A-205ENST00000558651 CUTAO60888 179 aa4.27□□□□□ -1.73
HMG20A-205ENST00000558651 KLHL18O94889 574 aa4.27□□□□□ -1.73
HMG20A-205ENST00000558651 KNG1P01042 644 aa4.27□□□□□ -1.73
HMG20A-205ENST00000558651 RAC3P60763 192 aa4.27□□□□□ -1.73
HMG20A-205ENST00000558651 CRIP3Q6Q6R5 217 aa4.27□□□□□ -1.73
HMG20A-205ENST00000558651 KCNT2Q6UVM3 1135 aa4.27□□□□□ -1.73
HMG20A-205ENST00000558651 GPR155Q7Z3F1 870 aa4.27□□□□□ -1.73
HMG20A-205ENST00000558651 ST13P5Q8NFI4 369 aaPredicted RBP4.27□□□□□ -1.73
HMG20A-205ENST00000558651 AJUBAQ96IF1 538 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms