RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 CPP00450 1065 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 PGM1P36871 562 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 PTGDRQ13258 359 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 CDAN1Q8IWY9 1227 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 HIPK4Q8NE63 616 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 CYFIP2Q96F07 1278 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 ASCC2Q9H1I8 757 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 SLC39A2Q9NP94 309 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 FLT4P35916 1363 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 H0Y626 953 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 PFDN6O15212 129 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 TRIM16O95361 564 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 ECE1P42892 770 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 AP1M1Q9BXS5 423 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 CD248Q9HCU0 757 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 FGGP02679 453 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 MAPK4P31152 587 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 MFAP3P55082 362 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 TIMM10P62072 90 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 PPP2R5CQ13362 524 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 KLHL38Q2WGJ6 581 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 CCNI2Q6ZMN8 369 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 DDHD1Q8NEL9 900 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 TBC1D22AQ8WUA7 517 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 EIF4E1BA6NMX2 242 aaKnown RBP12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 C6orf229H3BNL8 230 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 COPEO14579 308 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 GSTA4O15217 222 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 GJC2Q5T442 439 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 LRRC8BQ6P9F7 803 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 DDI1Q8WTU0 396 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 EPC1Q9H2F5 836 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 ATP8A2Q9NTI2 1148 aa12.66□□□□□ -0.38
CSPG4P12-201ENST00000558282 ARAP3Q8WWN8 1544 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 RNF103-CHMP3A0A140T963 221 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 WDR91A4D1P6 747 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 GNAT1P11488 350 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 P4HA1P13674 534 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 MAP4P27816 1152 aaKnown RBP12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 ADD1P35611 737 aaKnown RBP12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 HIC1Q14526 733 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 CNGA3Q16281 694 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 INAQ16352 499 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 RABGAP1LQ5R372 815 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 B4GALNT2Q8NHY0 566 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 PYROXD1Q8WU10 500 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 XAGE2Q96GT9 111 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 CCDC134Q9H6E4 229 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 VCPKMTQ9H867 229 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 DTNBO60941 627 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 FBLN1P23142 703 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 SERPINB1P30740 379 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 DEFA1P59665 94 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 DEFA3P59666 94 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 MRPS25P82663 173 aaKnown RBP12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 ZNF804AQ7Z570 1209 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 SLC26A7Q8TE54 656 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 METTL22Q9BUU2 404 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 SRPRBQ9Y5M8 271 aaKnown RBP12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 RAPGEF3O95398 923 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 H2AFXP16104 143 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 MARK3P27448 753 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 CCZ1BP86790 482 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 CCZ1P86791 482 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 FLOT2Q14254 428 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 RNF207Q6ZRF8 634 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 ARMT1Q9H993 441 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 L2HGDHQ9H9P8 463 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 DIABLOQ9NR28 239 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 GIMAP4Q9NUV9 329 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 TLK1Q9UKI8 766 aa12.65□□□□□ -0.38
CSPG4P12-201ENST00000558282 LGALS16A8MUM7 142 aa12.65□□□□□ -0.39
CSPG4P12-201ENST00000558282 SRGAP2O75044 1071 aa12.65□□□□□ -0.39
CSPG4P12-201ENST00000558282 PLA2G4AP47712 749 aa12.65□□□□□ -0.39
CSPG4P12-201ENST00000558282 PTK2Q05397 1052 aa12.65□□□□□ -0.39
CSPG4P12-201ENST00000558282 CCDC80Q76M96 950 aa12.65□□□□□ -0.39
CSPG4P12-201ENST00000558282 GSPT2Q8IYD1 628 aaKnown RBP12.65□□□□□ -0.39
CSPG4P12-201ENST00000558282 ZNF513Q8N8E2 541 aaPredicted RBP12.65□□□□□ -0.39
CSPG4P12-201ENST00000558282 XPO6Q96QU8 1125 aaKnown RBP12.65□□□□□ -0.39
CSPG4P12-201ENST00000558282 NDST4Q9H3R1 872 aa12.65□□□□□ -0.39
CSPG4P12-201ENST00000558282 SMYD3Q9H7B4 428 aa12.65□□□□□ -0.39
CSPG4P12-201ENST00000558282 MRPL47Q9HD33 250 aaKnown RBP12.65□□□□□ -0.39
CSPG4P12-201ENST00000558282 H7C0C1 242 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 NOP56O00567 594 aaKnown RBP12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 SCP2P22307 547 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 ATP5OP48047 213 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 PTGISQ16647 500 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 E4F1Q66K89 784 aaPredicted RBP12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 LRRC31Q6UY01 552 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 ZNF280CQ8ND82 737 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 SPATA4Q8NEY3 305 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 RNF34Q969K3 372 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 CLMNQ96JQ2 1002 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 WWP1Q9H0M0 922 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 RGL1Q9NZL6 768 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 IPO11Q9UI26 975 aaKnown RBP12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 COPG1Q9Y678 874 aaKnown RBP12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 ARHGAP31Q2M1Z3 1444 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms