RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 RALGAPA2Q2PPJ7 1873 aa6.05□□□□□ -1.44
SPG11-208ENST00000558155 TTC41PQ6P2S7 1318 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 LOC730098B7Z3J9 87 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 STK25O00506 426 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 ENPP3O14638 875 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 TREHO43280 583 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 GGPS1O95749 300 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 CFBP00751 764 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 FGAP02671 866 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 MMP1P03956 469 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 SMIM10L2AP0DMW4 78 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 SMIM10L2BP0DMW5 78 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 SNHG28P0DPA3 235 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 PCP11498 1178 aaKnown RBP6.04□□□□□ -1.44
SPG11-208ENST00000558155 MYCLP12524 364 aaPredicted RBP6.04□□□□□ -1.44
SPG11-208ENST00000558155 EIF2AK2P19525 551 aaKnown RBP6.04□□□□□ -1.44
SPG11-208ENST00000558155 GTF2F1P35269 517 aaKnown RBP eCLIP6.04□□□□□ -1.44
SPG11-208ENST00000558155 RRP1P56182 461 aaKnown RBP6.04□□□□□ -1.44
SPG11-208ENST00000558155 HNRNPUQ00839 825 aaKnown RBP eCLIP6.04□□□□□ -1.44
SPG11-208ENST00000558155 COASYQ13057 564 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 BTG3Q14201 252 aaPredicted RBP6.04□□□□□ -1.44
SPG11-208ENST00000558155 HIC1Q14526 733 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 CBX2Q14781 532 aaPredicted RBP6.04□□□□□ -1.44
SPG11-208ENST00000558155 CDC37Q16543 378 aaPredicted RBP6.04□□□□□ -1.44
SPG11-208ENST00000558155 HSDL1Q3SXM5 330 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 CCDC178Q5BJE1 867 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 FAM26DQ5JW98 314 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 VSIG10LQ86VR7 867 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 DGKHQ86XP1 1220 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 SAMD3Q8N6K7 520 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 EFHBQ8N7U6 833 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 TMC2Q8TDI7 906 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 PTCD2Q8WV60 388 aaKnown RBP6.04□□□□□ -1.44
SPG11-208ENST00000558155 CLP1Q92989 425 aaKnown RBP6.04□□□□□ -1.44
SPG11-208ENST00000558155 P2RX5Q93086 422 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 MSLNLQ96KJ4 702 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 C16orf70Q9BSU1 422 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 PHF7Q9BWX1 381 aaPredicted RBP6.04□□□□□ -1.44
SPG11-208ENST00000558155 USP26Q9BXU7 913 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 PXMP2Q9NR77 195 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 FAM86C1Q9NVL1 165 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 MAP3K20Q9NYL2 800 aaKnown RBP6.04□□□□□ -1.44
SPG11-208ENST00000558155 PLAGL2Q9UPG8 496 aa6.04□□□□□ -1.44
SPG11-208ENST00000558155 CHD7Q9P2D1 2997 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 PROB1E7EW31 1015 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 NOP56O00567 594 aaKnown RBP6.03□□□□□ -1.44
SPG11-208ENST00000558155 LINC01565O15544 149 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 DHX16O60231 1041 aaKnown RBP6.03□□□□□ -1.44
SPG11-208ENST00000558155 TBX10O75333 385 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 CTSHP09668 335 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 GOLGA8HP0CJ92 632 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 NT5C2P49902 561 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 TSHZ3Q63HK5 1081 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 MFSD6Q6ZSS7 791 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 ERMP1Q7Z2K6 904 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 RSPH3Q86UC2 560 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 ADGRF4Q8IZF3 695 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 SPPL3Q8TCT6 385 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 MICAL1Q8TDZ2 1067 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 RPGRIP1Q96KN7 1286 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 PDCD2LQ9BRP1 358 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 RNF41Q9H4P4 317 aaPredicted RBP6.03□□□□□ -1.44
SPG11-208ENST00000558155 VAT1LQ9HCJ6 419 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 ALG13Q9NP73 1137 aaKnown RBP6.03□□□□□ -1.44
SPG11-208ENST00000558155 HELLSQ9NRZ9 838 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 SETD4Q9NVD3 440 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 COL20A1Q9P218 1284 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 MYH6P13533 1939 aa6.03□□□□□ -1.44
SPG11-208ENST00000558155 ADGRA3Q8IWK6 1321 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 MYO10Q9HD67 2058 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 FSD2A1L4K1 749 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 H0Y858 1186 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 SORBS3O60504 671 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 DGKIO75912 1065 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 CSPG5O95196 566 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 LGALS2P05162 132 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 PARP1P09874 1014 aaKnown RBP6.02□□□□□ -1.45
SPG11-208ENST00000558155 STAG3L1P0CL83 205 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 PRKCSHP14314 528 aaPredicted RBP6.02□□□□□ -1.45
SPG11-208ENST00000558155 ATF7P17544 494 aaPredicted RBP6.02□□□□□ -1.45
SPG11-208ENST00000558155 CCND2P30279 289 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 HOXC8P31273 242 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 ICAM3P32942 547 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 HSD17B4P51659 736 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 VCPP55072 806 aaKnown RBP6.02□□□□□ -1.45
SPG11-208ENST00000558155 SP2Q02086 613 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 TRAF1Q13077 416 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 NEDD9Q14511 834 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 QRICH1Q2TAL8 776 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 MCMDC2Q4G0Z9 681 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 ASPRV1Q53RT3 343 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 VPS53Q5VIR6 699 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 STOX1Q6ZVD7 989 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 ZBTB33Q86T24 672 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 RBM23Q86U06 439 aaKnown RBP6.02□□□□□ -1.45
SPG11-208ENST00000558155 IQCA1Q86XH1 822 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 CMTR2Q8IYT2 770 aaKnown RBP6.02□□□□□ -1.45
SPG11-208ENST00000558155 SMRP1Q8NCR6 262 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 POF1BQ8WVV4 589 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 ESR2Q92731 530 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms