RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 CYP46A1Q9Y6A2 500 aa10.06□□□□□ -0.8
SNRPA1-206ENST00000558059 EYSQ5T1H1 3165 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 GRXCR1A8MXD5 290 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 H3BRB1 525 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 NOP56O00567 594 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 ADAMTS3O15072 1205 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 IFNAR1P17181 557 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 HOXC8P31273 242 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 RFC2P35250 354 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 CCT2P78371 535 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 RBL2Q08999 1139 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 GPNMBQ14956 572 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 TRIM71Q2Q1W2 868 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 OTOP2Q7RTS6 562 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 DEFB128Q7Z7B8 93 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 RETREG2Q8NC44 543 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 CYP2W1Q8TAV3 490 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 CAGE1Q8TC20 777 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 WNT8BQ93098 351 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 PHKBQ93100 1093 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 CDHR1Q96JP9 859 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 PGBD1Q96JS3 809 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 FAM161BQ96MY7 647 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 GUCD1Q96NT3 240 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 ANO3Q9BYT9 981 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 TUT1Q9H6E5 874 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 EHMT1Q9H9B1 1298 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 NCOA5Q9HCD5 579 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 TMEM260Q9NX78 707 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 NOD1Q9Y239 953 aa10.05□□□□□ -0.8
SNRPA1-206ENST00000558059 GSTTP1A0A1W2PQM5 241 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 ESYT2A0FGR8 921 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 MAFGO15525 162 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 PPFIA3O75145 1194 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 SREBF1P36956 1147 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 SP4Q02446 784 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 PTK7Q13308 1070 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 AP3B2Q13367 1082 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 MTMR1Q13613 665 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 ZNF697Q5TEC3 545 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 JAKMIP3Q5VZ66 844 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 TRIM50Q86XT4 487 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 GIMAP8Q8ND71 665 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 ZNF274Q96GC6 653 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 MXRA8Q9BRK3 442 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 LARP6Q9BRS8 491 aaKnown RBP10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 RNF26Q9BY78 433 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 ZMYND12Q9H0C1 365 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 RNPEPQ9H4A4 650 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 KCNH7Q9NS40 1196 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 STXBP5LQ9Y2K9 1186 aa10.04□□□□□ -0.8
SNRPA1-206ENST00000558059 MYH9P35579 1960 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 TMEM265A0A087WTH1 108 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 FAM205CA6NFA0 338 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 MEIS1O00470 390 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 TRANK1O15050 2925 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 PFKMP08237 780 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 SMIM10L2AP0DMW4 78 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 SMIM10L2BP0DMW5 78 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 ARP10275 920 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 CKBP12277 381 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 SELPP16109 830 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 DNAJB2P25686 324 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 PBX2P40425 430 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 CEP55Q53EZ4 464 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 UTP14CQ5TAP6 766 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 TRAF7Q6Q0C0 670 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 SERINC5Q86VE9 423 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 CCDC155Q8N6L0 562 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 AFAP1L1Q8TED9 768 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 CRYGNQ8WXF5 182 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 SEPT1Q8WYJ6 367 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 SLC26A6Q9BXS9 759 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 PBX4Q9BYU1 374 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 MTIF3Q9H2K0 278 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 PDRG1Q9NUG6 133 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 PKD2L1Q9P0L9 805 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 PTPRSQ13332 1948 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 WDR81Q562E7 1941 aa10.03□□□□□ -0.8
SNRPA1-206ENST00000558059 C17orf102A2RUQ5 167 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 RBAK-RBAKDNI3L0D1 243 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 TREHO43280 583 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 NBNO60934 754 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 CXCL10P02778 98 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 CYP3A4P08684 503 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 HOXB3P14651 431 aaPredicted RBP10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 TCF7P36402 384 aaPredicted RBP10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 ANAPC15P60006 121 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 ADAM17P78536 824 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 ARHGAP4P98171 946 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 AKAP17AQ02040 695 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 ITGB3BPQ13352 177 aaPredicted RBP10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 ZNF618Q5T7W0 954 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 LRRC8DQ7L1W4 858 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 NIPA1Q7RTP0 329 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 CCDC12Q8WUD4 166 aaPredicted RBP10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 ATP6V0A1Q93050 837 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 TIFAQ96CG3 184 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms