RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 NRCAMQ92823 1304 aa18.35■□□□□ 0.53
SCFD1-224ENST00000557713 SH2B2O14492 632 aaPredicted RBP18.35■□□□□ 0.53
SCFD1-224ENST00000557713 MCM5P33992 734 aa18.35■□□□□ 0.53
SCFD1-224ENST00000557713 TCF7P36402 384 aaPredicted RBP18.35■□□□□ 0.53
SCFD1-224ENST00000557713 SP4Q02446 784 aa18.35■□□□□ 0.53
SCFD1-224ENST00000557713 RPAINQ86UA6 219 aa18.35■□□□□ 0.53
SCFD1-224ENST00000557713 APBB2Q92870 758 aa18.35■□□□□ 0.53
SCFD1-224ENST00000557713 GPRASP2Q96D09 838 aa18.35■□□□□ 0.53
SCFD1-224ENST00000557713 MRPL38Q96DV4 380 aaKnown RBP18.35■□□□□ 0.53
SCFD1-224ENST00000557713 TMEM87BQ96K49 555 aa18.35■□□□□ 0.53
SCFD1-224ENST00000557713 PSTPIP2Q9H939 334 aa18.35■□□□□ 0.53
SCFD1-224ENST00000557713 GSTTP1A0A1W2PQM5 241 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 CCDC69A6NI79 296 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 H3BNC9 293 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 UPP2O95045 317 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 CHRNA1P02708 482 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 KCNA2P16389 499 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 ITGB5P18084 799 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 LIFRP42702 1097 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 LEXMQ3ZCV2 418 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 KHSRPQ92945 711 aaKnown RBP eCLIP18.34■□□□□ 0.533e-7■■■■□ 20.3
SCFD1-224ENST00000557713 YME1L1Q96TA2 773 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 IFIH1Q9BYX4 1025 aaKnown RBP18.34■□□□□ 0.53
SCFD1-224ENST00000557713 LSG1Q9H089 658 aaKnown RBP18.34■□□□□ 0.53
SCFD1-224ENST00000557713 CD320Q9NPF0 282 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 UBIAD1Q9Y5Z9 338 aa18.34■□□□□ 0.53
SCFD1-224ENST00000557713 RXRAP19793 462 aa18.33■□□□□ 0.52
SCFD1-224ENST00000557713 NFXL1Q6ZNB6 911 aa18.33■□□□□ 0.52
SCFD1-224ENST00000557713 RUFY4Q6ZNE9 571 aa18.33■□□□□ 0.52
SCFD1-224ENST00000557713 TMEM192Q8IY95 271 aa18.33■□□□□ 0.52
SCFD1-224ENST00000557713 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.33■□□□□ 0.52
SCFD1-224ENST00000557713 SEPT1Q8WYJ6 367 aa18.33■□□□□ 0.52
SCFD1-224ENST00000557713 CDHR1Q96JP9 859 aa18.33■□□□□ 0.52
SCFD1-224ENST00000557713 LRFN3Q9BTN0 628 aa18.33■□□□□ 0.52
SCFD1-224ENST00000557713 EHMT1Q9H9B1 1298 aa18.33■□□□□ 0.52
SCFD1-224ENST00000557713 COL4A6Q14031 1691 aa18.33■□□□□ 0.52
SCFD1-224ENST00000557713 SLC27A2O14975 620 aa18.32■□□□□ 0.52
SCFD1-224ENST00000557713 CALM1P0DP23 149 aa18.32■□□□□ 0.52
SCFD1-224ENST00000557713 CALM2P0DP24 149 aa18.32■□□□□ 0.52
SCFD1-224ENST00000557713 CALM3P0DP25 149 aa18.32■□□□□ 0.52
SCFD1-224ENST00000557713 MGAT3Q09327 533 aa18.32■□□□□ 0.52
SCFD1-224ENST00000557713 GPM6BQ13491 265 aa18.32■□□□□ 0.52
SCFD1-224ENST00000557713 PTPROQ16827 1216 aa18.32■□□□□ 0.52
SCFD1-224ENST00000557713 hCG_1642624A0A1W2PR95 340 aa18.31■□□□□ 0.52
SCFD1-224ENST00000557713 MAFGO15525 162 aa18.31■□□□□ 0.52
SCFD1-224ENST00000557713 KCNA5P22460 613 aa18.31■□□□□ 0.52
SCFD1-224ENST00000557713 IRX6P78412 446 aaPredicted RBP18.31■□□□□ 0.52
SCFD1-224ENST00000557713 NECTIN1Q15223 517 aa18.31■□□□□ 0.52
SCFD1-224ENST00000557713 UBE2SQ16763 222 aa18.31■□□□□ 0.52
SCFD1-224ENST00000557713 MARCH8Q5T0T0 291 aa18.31■□□□□ 0.52
SCFD1-224ENST00000557713 TAF2Q6P1X5 1199 aa18.31■□□□□ 0.52
SCFD1-224ENST00000557713 FAM178BQ8IXR5 827 aa18.31■□□□□ 0.52
SCFD1-224ENST00000557713 FANCBQ8NB91 859 aa18.31■□□□□ 0.52
SCFD1-224ENST00000557713 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
SCFD1-224ENST00000557713 ERAP1Q9NZ08 941 aa18.31■□□□□ 0.52
SCFD1-224ENST00000557713 MBLAC1A4D2B0 266 aaPredicted RBP18.3■□□□□ 0.52
SCFD1-224ENST00000557713 PI4K2BG5E9Z4 385 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 ENPP3O14638 875 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 PPFIA1Q13136 1202 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 MTMR1Q13613 665 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 LPIN1Q14693 890 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 GRIK4Q16099 956 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 CREB3L3Q68CJ9 461 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 RAB11FIP4Q86YS3 637 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 CCDC82Q8N4S0 544 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 BANK1Q8NDB2 785 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 NEK9Q8TD19 979 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 ESYT1Q9BSJ8 1104 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 SMARCAD1Q9H4L7 1026 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 JADE2Q9NQC1 790 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 PCDHA6Q9UN73 950 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 PCDHA8Q9Y5H6 950 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 SLC12A7Q9Y666 1083 aa18.3■□□□□ 0.52
SCFD1-224ENST00000557713 SPDYE3A6NKU9 549 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 LINC00271P0C7V0 271 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 GHRP10912 638 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 PLA2G5P39877 138 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 COL19A1Q14993 1142 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 TIGD5Q53EQ6 642 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 TMEM31Q5JXX7 168 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 TMTC3Q6ZXV5 915 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 RSPH3Q86UC2 560 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 SGMS1Q86VZ5 419 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 FIBCD1Q8N539 461 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 DNAJB3Q8WWF6 145 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 GLG1Q92896 1179 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 LRRC2Q9BYS8 371 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 C11orf16Q9NQ32 467 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 PKD2L1Q9P0L9 805 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 TUBE1Q9UJT0 475 aa18.29■□□□□ 0.52
SCFD1-224ENST00000557713 GRXCR2A6NFK2 248 aa18.28■□□□□ 0.52
SCFD1-224ENST00000557713 C5orf67F2Z3F1 127 aa18.28■□□□□ 0.52
SCFD1-224ENST00000557713 GPR37L1O60883 481 aa18.28■□□□□ 0.52
SCFD1-224ENST00000557713 RB1P06400 928 aa18.28■□□□□ 0.52
SCFD1-224ENST00000557713 IL9P15248 144 aa18.28■□□□□ 0.52
SCFD1-224ENST00000557713 MARK3P27448 753 aa18.28■□□□□ 0.52
SCFD1-224ENST00000557713 TCEAL5Q5H9L2 206 aa18.28■□□□□ 0.52
SCFD1-224ENST00000557713 FBXO47Q5MNV8 452 aa18.28■□□□□ 0.52
SCFD1-224ENST00000557713 PTCRAQ6ISU1 281 aaPredicted RBP18.28■□□□□ 0.52
SCFD1-224ENST00000557713 PCYT2Q99447 389 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms