RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 HNRNPLLQ8WVV9 542 aaKnown RBP4.29□□□□□ -1.72
FOXN3-216ENST00000557496 SGSM3Q96HU1 749 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 ZNF747Q9BV97 191 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 VPS11Q9H270 941 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 DEF6Q9H4E7 631 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 KCND1Q9NSA2 647 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 ZFP69BQ9UJL9 534 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 TCAF1Q9Y4C2 921 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 TELO2Q9Y4R8 837 aa4.29□□□□□ -1.72
FOXN3-216ENST00000557496 CYR61O00622 381 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 MUSKO15146 869 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 SUV39H1O43463 412 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 SLPIP03973 132 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 CKMP06732 381 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 CSF2RBP32927 897 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 HSP90AA2PQ14568 343 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-216ENST00000557496 NTRK3Q16288 839 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 SKIDA1Q1XH10 827 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 SPDYAQ5MJ70 313 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 CD276Q5ZPR3 534 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 KCNT2Q6UVM3 1135 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 Q8TCH9 128 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 DCAF4Q8WV16 495 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 AJUBAQ96IF1 538 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 ZFYVE21Q9BQ24 234 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 AARSD1Q9BTE6 412 aaKnown RBP4.28□□□□□ -1.72
FOXN3-216ENST00000557496 SEMA4AQ9H3S1 761 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 SEC61A2Q9H9S3 476 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 ARHGEF4Q9NR80 690 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 SLC4A7Q9Y6M7 1214 aa4.28□□□□□ -1.72
FOXN3-216ENST00000557496 NKRFO15226 690 aaKnown RBP eCLIP4.27□□□□□ -1.73
FOXN3-216ENST00000557496 FZD7O75084 574 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 ZNF623O75123 536 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 FBXO21O94952 628 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 IL18BPO95998 194 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 FGFR1P11362 822 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 GNAT1P11488 350 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 EPHA5P54756 1037 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 GPR85P60893 370 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 ARID5AQ03989 594 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 SPIRE1Q08AE8 756 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 STYK1Q6J9G0 422 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 GPR155Q7Z3F1 870 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.27□□□□□ -1.73
FOXN3-216ENST00000557496 REXO1L1PQ8IX06 675 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 STPG3Q8N7X2 389 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 OSBP2Q969R2 916 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 KATNBL1Q9H079 304 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 ST7Q9NRC1 585 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 ARHGAP20Q9P2F6 1191 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 TESMINQ9Y4I5 508 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 NUB1Q9Y5A7 615 aa4.27□□□□□ -1.73
FOXN3-216ENST00000557496 ZNF839A8K0R7 811 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 PRODHO43272 600 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 KLF4O43474 513 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 FOXS1O43638 330 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 SOD2P04179 222 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 ENO2P09104 434 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-216ENST00000557496 PABPC1P11940 636 aaKnown RBP4.26□□□□□ -1.73
FOXN3-216ENST00000557496 COL6A2P12110 1019 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 TCF3P15923 654 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 GLRBP48167 497 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 HMGA2P52926 109 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 PFKPQ01813 784 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 ANKS3Q6ZW76 656 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 KCTD1Q719H9 257 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 ZFPM1Q8IX07 1006 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.26□□□□□ -1.73
FOXN3-216ENST00000557496 GNRHR2Q96P88 292 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 KCNJ15Q99712 375 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 DSEQ9UL01 958 aa4.26□□□□□ -1.73
FOXN3-216ENST00000557496 R3HCC1Q9Y3T6 440 aaKnown RBP4.26□□□□□ -1.73
FOXN3-216ENST00000557496 IQCA1LA6NCM1 817 aa4.25□□□□□ -1.73
FOXN3-216ENST00000557496 H0Y858 1186 aa4.25□□□□□ -1.73
FOXN3-216ENST00000557496 ACOT7O00154 380 aa4.25□□□□□ -1.73
FOXN3-216ENST00000557496 AMHP03971 560 aa4.25□□□□□ -1.73
FOXN3-216ENST00000557496 TCTN3Q6NUS6 607 aa4.25□□□□□ -1.73
FOXN3-216ENST00000557496 IFNL3Q8IZI9 196 aa4.25□□□□□ -1.73
FOXN3-216ENST00000557496 IFNL2Q8IZJ0 200 aa4.25□□□□□ -1.73
FOXN3-216ENST00000557496 ST13P5Q8NFI4 369 aaPredicted RBP4.25□□□□□ -1.73
FOXN3-216ENST00000557496 LMF1Q96S06 567 aa4.25□□□□□ -1.73
FOXN3-216ENST00000557496 PCED1AQ9H1Q7 454 aa4.25□□□□□ -1.73
FOXN3-216ENST00000557496 ASXL2Q76L83 1435 aa4.24□□□□□ -1.73
FOXN3-216ENST00000557496 BLACEA4D250 179 aa4.24□□□□□ -1.73
FOXN3-216ENST00000557496 FAM47E-STBD1D6RA91 191 aa4.24□□□□□ -1.73
FOXN3-216ENST00000557496 ZNF888P0CJ79 500 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-216ENST00000557496 DNAJA1P31689 397 aaKnown RBP4.24□□□□□ -1.73
FOXN3-216ENST00000557496 USP10Q14694 798 aaKnown RBP4.24□□□□□ -1.73
FOXN3-216ENST00000557496 YOD1Q5VVQ6 348 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-216ENST00000557496 NSMFQ6X4W1 530 aa4.24□□□□□ -1.73
FOXN3-216ENST00000557496 USP51Q70EK9 711 aa4.24□□□□□ -1.73
FOXN3-216ENST00000557496 SH3RF2Q8TEC5 729 aa4.24□□□□□ -1.73
FOXN3-216ENST00000557496 NEIL1Q96FI4 390 aaPredicted RBP4.24□□□□□ -1.73
FOXN3-216ENST00000557496 LRRC37BQ96QE4 947 aa4.24□□□□□ -1.73
FOXN3-216ENST00000557496 GMLQ99445 158 aa4.24□□□□□ -1.73
FOXN3-216ENST00000557496 TACO1Q9BSH4 297 aaKnown RBP4.24□□□□□ -1.73
FOXN3-216ENST00000557496 MRIQ9BWK5 157 aa4.24□□□□□ -1.73
FOXN3-216ENST00000557496 IPPKQ9H8X2 491 aa4.24□□□□□ -1.73
FOXN3-216ENST00000557496 ZFR2Q9UPR6 939 aaKnown RBP4.24□□□□□ -1.73
FOXN3-216ENST00000557496 PTPN22Q9Y2R2 807 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms