RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 IPO5O00410 1097 aaKnown RBP14.02□□□□□ -0.16
SHMT2-229ENST00000557348 NFIBO00712 420 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 GRIN3BO60391 1043 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 STX10O60499 249 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 STAM2O75886 525 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 DDNO94850 711 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-229ENST00000557348 SSBP05455 408 aaKnown RBP eCLIP14.02□□□□□ -0.16
SHMT2-229ENST00000557348 GAP43P17677 238 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 CYP11B2P19099 503 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 HMGCS2P54868 508 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 SLC12A3P55017 1021 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 RNF207Q6ZRF8 634 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 CATSPERGQ6ZRH7 1159 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 KCNK18Q7Z418 384 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 MB21D1Q8N884 522 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 KIAA0895Q8NCT3 520 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 SYTL5Q8TDW5 730 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-229ENST00000557348 PANX2Q96RD6 677 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 TEX13BQ9BXU2 312 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 TBC1D22BQ9NU19 505 aa14.02□□□□□ -0.16
SHMT2-229ENST00000557348 CWC15Q9P013 229 aaKnown RBP14.02□□□□□ -0.16
SHMT2-229ENST00000557348 ZNF215Q9UL58 517 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-229ENST00000557348 PHLPP2Q6ZVD8 1323 aa14.02□□□□□ -0.17
SHMT2-229ENST00000557348 SBF1O95248 1867 aa14.02□□□□□ -0.17
SHMT2-229ENST00000557348 RBBP6Q7Z6E9 1792 aaKnown RBP14.01□□□□□ -0.17
SHMT2-229ENST00000557348 POTEFA5A3E0 1075 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 GOLGA6L9A6NEM1 432 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 LGALS16A8MUM7 142 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 AKR1B15C9JRZ8 316 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-229ENST00000557348 E9PMD0 336 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 SPATA31C1P0DKV0 1188 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 STAT3P40763 770 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 DNM2P50570 870 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 ECM1Q16610 540 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 HSP90AA4PQ58FG1 418 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 POTEEQ6S8J3 1075 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 TBC1D5Q92609 795 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 ATG4CQ96DT6 458 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 NACC1Q96RE7 527 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 HSD17B14Q9BPX1 270 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 TMX1Q9H3N1 280 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 RNF146Q9NTX7 359 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 PSD3Q9NYI0 1048 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 MAPK8IP1Q9UQF2 711 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 UBIAD1Q9Y5Z9 338 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 TBCAO75347 108 aaKnown RBP14.01□□□□□ -0.17
SHMT2-229ENST00000557348 USP2O75604 605 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-229ENST00000557348 GNA14O95837 355 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 FCER1AP12319 257 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 YBX3P16989 372 aaKnown RBP eCLIP14.01□□□□□ -0.177e-8■□□□□ 9
SHMT2-229ENST00000557348 RPS6P62753 249 aaKnown RBP14.01□□□□□ -0.17
SHMT2-229ENST00000557348 C9orf131Q5VYM1 1079 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 FBXO38Q6PIJ6 1188 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 RETREG2Q8NC44 543 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 RDM1Q8NG50 284 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 CDHR1Q96JP9 859 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 EFCC1Q9HA90 598 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 SLC39A2Q9NP94 309 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 JADE2Q9NQC1 790 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 SEL1LQ9UBV2 794 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 FBXO40Q9UH90 709 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 COL4A3BPQ9Y5P4 624 aa14.01□□□□□ -0.17
SHMT2-229ENST00000557348 ZSCAN12O43309 604 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 TAL1P17542 331 aaPredicted RBP14□□□□□ -0.17
SHMT2-229ENST00000557348 CCND2P30279 289 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 IRX5P78411 483 aaPredicted RBP14□□□□□ -0.17
SHMT2-229ENST00000557348 PPATQ06203 517 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 B3GNT9Q6UX72 402 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 STXBP4Q6ZWJ1 553 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 PROCA1Q8NCQ7 364 aaPredicted RBP14□□□□□ -0.17
SHMT2-229ENST00000557348 CHST13Q8NET6 341 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 REPS2Q8NFH8 660 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 CYP2W1Q8TAV3 490 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 GJA10Q969M2 543 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 CEP63Q96MT8 703 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 BAG1Q99933 345 aaPredicted RBP14□□□□□ -0.17
SHMT2-229ENST00000557348 DUSP9Q99956 384 aaKnown RBP14□□□□□ -0.17
SHMT2-229ENST00000557348 NUP58Q9BVL2 599 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 ACAD9Q9H845 621 aa14□□□□□ -0.17
SHMT2-229ENST00000557348 IQCA1LA6NCM1 817 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 TRIM49BA6NDI0 452 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 SFNP31947 248 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 COPB2P35606 906 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 JAK3P52333 1124 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 FKBP3Q00688 224 aaKnown RBP13.99□□□□□ -0.17
SHMT2-229ENST00000557348 PDE4CQ08493 712 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 MTMR1Q13613 665 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 VGLL4Q14135 290 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 ARID5BQ14865 1188 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 PGM5Q15124 567 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 EDRF1Q3B7T1 1238 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 HERC4Q5GLZ8 1057 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-229ENST00000557348 FKBP15Q5T1M5 1219 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 ARHGEF16Q5VV41 709 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 ANKRD40Q6AI12 368 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 SNRNP48Q6IEG0 339 aaKnown RBP13.99□□□□□ -0.17
SHMT2-229ENST00000557348 NLRX1Q86UT6 975 aa13.99□□□□□ -0.17
SHMT2-229ENST00000557348 ANKRD13AQ8IZ07 590 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms