RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PRRX2Q99811 253 aa14.61□□□□□ -0.07
PSEN1-221ENST00000557293 PLVAPQ9BX97 442 aa14.61□□□□□ -0.07
PSEN1-221ENST00000557293 MAP3K20Q9NYL2 800 aaKnown RBP14.61□□□□□ -0.07
PSEN1-221ENST00000557293 RWDD3Q9Y3V2 267 aa14.61□□□□□ -0.07
PSEN1-221ENST00000557293 ZDBF2Q9HCK1 2354 aa14.61□□□□□ -0.07
PSEN1-221ENST00000557293 KMT2EQ8IZD2 1858 aa14.61□□□□□ -0.07
PSEN1-221ENST00000557293 TTC3P53804 2025 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 GFRA3O60609 400 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 AVPR2P30518 371 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 MRPS9P82933 396 aaKnown RBP14.6□□□□□ -0.07
PSEN1-221ENST00000557293 MGAT3Q09327 533 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 LPIN1Q14693 890 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 RUFY4Q6ZNE9 571 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 TRIM50Q86XT4 487 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 EFHBQ8N7U6 833 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 ENAHQ8N8S7 591 aaPredicted RBP14.6□□□□□ -0.07
PSEN1-221ENST00000557293 LINC01599Q8WXQ3 324 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 P2RX5Q93086 422 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 GPR20Q99678 358 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 AMNQ9BXJ7 453 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 USP26Q9BXU7 913 aa14.6□□□□□ -0.07
PSEN1-221ENST00000557293 ZFHX2Q9C0A1 2572 aaPredicted RBP14.6□□□□□ -0.07
PSEN1-221ENST00000557293 SPATA31C2B4DYI2 1134 aa14.59□□□□□ -0.07
PSEN1-221ENST00000557293 KDM4AO75164 1064 aa14.59□□□□□ -0.07
PSEN1-221ENST00000557293 CSPG5O95196 566 aa14.59□□□□□ -0.07
PSEN1-221ENST00000557293 GHRP10912 638 aa14.59□□□□□ -0.07
PSEN1-221ENST00000557293 ICAM3P32942 547 aa14.59□□□□□ -0.07
PSEN1-221ENST00000557293 BTG3Q14201 252 aaPredicted RBP14.59□□□□□ -0.07
PSEN1-221ENST00000557293 SAMD3Q8N6K7 520 aa14.59□□□□□ -0.07
PSEN1-221ENST00000557293 LMBR1Q8WVP7 490 aa14.59□□□□□ -0.07
PSEN1-221ENST00000557293 ZSCAN10Q96SZ4 725 aaPredicted RBP14.59□□□□□ -0.07
PSEN1-221ENST00000557293 KAT14Q9H8E8 782 aa14.59□□□□□ -0.07
PSEN1-221ENST00000557293 ZSWIM5Q9P217 1185 aa14.59□□□□□ -0.07
PSEN1-221ENST00000557293 USP15Q9Y4E8 981 aaPredicted RBP14.59□□□□□ -0.07
PSEN1-221ENST00000557293 MRPL42Q9Y6G3 142 aaKnown RBP14.59□□□□□ -0.07
PSEN1-221ENST00000557293 CACNA1HO95180 2353 aa14.59□□□□□ -0.07
PSEN1-221ENST00000557293 USP34Q70CQ2 3546 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 PARP1P09874 1014 aaKnown RBP14.58□□□□□ -0.08
PSEN1-221ENST00000557293 GNAT1P11488 350 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 CCND2P30279 289 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 NDUFV1P49821 464 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 PDE1AP54750 535 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 SIGLEC14Q08ET2 396 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 CCDC178Q5BJE1 867 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 CYFIP1Q7L576 1253 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 SUGP1Q8IWZ8 645 aaKnown RBP14.58□□□□□ -0.08
PSEN1-221ENST00000557293 INPP4AQ96PE3 977 aaPredicted RBP14.58□□□□□ -0.08
PSEN1-221ENST00000557293 RNF41Q9H4P4 317 aaPredicted RBP14.58□□□□□ -0.08
PSEN1-221ENST00000557293 AGO3Q9H9G7 860 aaKnown RBP14.58□□□□□ -0.08
PSEN1-221ENST00000557293 PCDHGC5Q9Y5F6 944 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 PCDHA1Q9Y5I3 950 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 CCDC171Q6TFL3 1326 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 MYH6P13533 1939 aa14.58□□□□□ -0.08
PSEN1-221ENST00000557293 B4E1Z4 1266 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 ZBTB5O15062 677 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 DHX16O60231 1041 aaKnown RBP14.57□□□□□ -0.08
PSEN1-221ENST00000557293 NRIP1P48552 1158 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 ARHGAP4P98171 946 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 RBM10P98175 930 aaKnown RBP14.57□□□□□ -0.08
PSEN1-221ENST00000557293 NAALADL2Q58DX5 795 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 FBXO47Q5MNV8 452 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 METTL7BQ6UX53 244 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 TICAM2Q86XR7 235 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 KLHL23Q8NBE8 558 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 VN1R2Q8NFZ6 395 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 ATP8B4Q8TF62 1192 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 SUSD6Q92537 303 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 PHF7Q9BWX1 381 aaPredicted RBP14.57□□□□□ -0.08
PSEN1-221ENST00000557293 BARX2Q9UMQ3 279 aaPredicted RBP14.57□□□□□ -0.08
PSEN1-221ENST00000557293 PLXNA3P51805 1871 aa14.57□□□□□ -0.08
PSEN1-221ENST00000557293 KLRF2D3W0D1 207 aa14.56□□□□□ -0.08
PSEN1-221ENST00000557293 PROB1E7EW31 1015 aa14.56□□□□□ -0.08
PSEN1-221ENST00000557293 PDGFBP01127 241 aaPredicted RBP14.56□□□□□ -0.08
PSEN1-221ENST00000557293 MARCH8Q5T0T0 291 aa14.56□□□□□ -0.08
PSEN1-221ENST00000557293 UTP14CQ5TAP6 766 aaKnown RBP14.56□□□□□ -0.08
PSEN1-221ENST00000557293 RBM23Q86U06 439 aaKnown RBP14.56□□□□□ -0.08
PSEN1-221ENST00000557293 FCHSD1Q86WN1 690 aa14.56□□□□□ -0.08
PSEN1-221ENST00000557293 IQCA1Q86XH1 822 aa14.56□□□□□ -0.08
PSEN1-221ENST00000557293 POF1BQ8WVV4 589 aa14.56□□□□□ -0.08
PSEN1-221ENST00000557293 RTEL1Q9NZ71 1219 aa14.56□□□□□ -0.08
PSEN1-221ENST00000557293 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
PSEN1-221ENST00000557293 CFAP54Q96N23 3096 aa14.56□□□□□ -0.08
PSEN1-221ENST00000557293 PTPRZ1P23471 2315 aaPredicted RBP14.55□□□□□ -0.08
PSEN1-221ENST00000557293 DOCK5Q9H7D0 1870 aa14.55□□□□□ -0.08
PSEN1-221ENST00000557293 PALM3A6NDB9 673 aaPredicted RBP14.55□□□□□ -0.08
PSEN1-221ENST00000557293 H0Y858 1186 aa14.55□□□□□ -0.08
PSEN1-221ENST00000557293 GCOM1H8Y6P7 765 aaPredicted RBP14.55□□□□□ -0.08
PSEN1-221ENST00000557293 NOP56O00567 594 aaKnown RBP14.55□□□□□ -0.08
PSEN1-221ENST00000557293 ZNF213O14771 459 aa14.55□□□□□ -0.08
PSEN1-221ENST00000557293 POLR2MP0CAP2 368 aa14.55□□□□□ -0.08
PSEN1-221ENST00000557293 NEDD9Q14511 834 aa14.55□□□□□ -0.08
PSEN1-221ENST00000557293 SEC23AQ15436 765 aa14.55□□□□□ -0.08
PSEN1-221ENST00000557293 ASCL5Q7RTU5 278 aa14.55□□□□□ -0.08
PSEN1-221ENST00000557293 CMTR2Q8IYT2 770 aaKnown RBP14.55□□□□□ -0.08
PSEN1-221ENST00000557293 ATOH1Q92858 354 aaPredicted RBP14.55□□□□□ -0.08
PSEN1-221ENST00000557293 RPGRIP1Q96KN7 1286 aa14.55□□□□□ -0.08
PSEN1-221ENST00000557293 TLR9Q9NR96 1032 aa14.55□□□□□ -0.08
PSEN1-221ENST00000557293 FRMPD4Q14CM0 1322 aa14.55□□□□□ -0.08
PSEN1-221ENST00000557293 NRCAMQ92823 1304 aa14.55□□□□□ -0.08
PSEN1-221ENST00000557293 MBLAC1A4D2B0 266 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms