RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 PRR16Q569H4 304 aa10.04□□□□□ -0.8
PRKCH-222ENST00000556778 XRRA1Q6P2D8 792 aa10.04□□□□□ -0.8
PRKCH-222ENST00000556778 NLRX1Q86UT6 975 aa10.04□□□□□ -0.8
PRKCH-222ENST00000556778 DIS3L2Q8IYB7 885 aaKnown RBP10.04□□□□□ -0.8
PRKCH-222ENST00000556778 BICD2Q8TD16 824 aa10.04□□□□□ -0.8
PRKCH-222ENST00000556778 WASF1Q92558 559 aa10.04□□□□□ -0.8
PRKCH-222ENST00000556778 KAT2BQ92831 832 aa10.04□□□□□ -0.8
PRKCH-222ENST00000556778 LENG9Q96B70 501 aa10.04□□□□□ -0.8
PRKCH-222ENST00000556778 SPATA33Q96N06 139 aa10.04□□□□□ -0.8
PRKCH-222ENST00000556778 GLT8D2Q9H1C3 349 aa10.04□□□□□ -0.8
PRKCH-222ENST00000556778 MLXIPQ9HAP2 919 aa10.04□□□□□ -0.8
PRKCH-222ENST00000556778 SPC25Q9HBM1 224 aa10.04□□□□□ -0.8
PRKCH-222ENST00000556778 AGO4Q9HCK5 861 aaKnown RBP10.04□□□□□ -0.8
PRKCH-222ENST00000556778 LCTP09848 1927 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 DDX39AO00148 427 aaKnown RBP10.03□□□□□ -0.8
PRKCH-222ENST00000556778 DHX15O43143 795 aaKnown RBP10.03□□□□□ -0.8
PRKCH-222ENST00000556778 STAM2O75886 525 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 ZNF286BP0CG31 522 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 TGFB3P10600 412 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 SYN1P17600 705 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 GJB2P29033 226 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 KRT2P35908 639 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 LAMC2Q13753 1193 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 HIC1Q14526 733 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 GNPTABQ3T906 1256 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 PLA2G4DQ86XP0 818 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 C7orf61Q8IZ16 206 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 FAM184AQ8NB25 1140 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 FBXO18Q8NFZ0 1043 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 EMID1Q96A84 441 aaPredicted RBP10.03□□□□□ -0.8
PRKCH-222ENST00000556778 GPRASP2Q96D09 838 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 C8orf76Q96K31 380 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 GPR20Q99678 358 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 TSEN34Q9BSV6 310 aaKnown RBP10.03□□□□□ -0.8
PRKCH-222ENST00000556778 STARD7Q9NQZ5 370 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 RABGEF1Q9UJ41 708 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 ATP11BQ9Y2G3 1177 aa10.03□□□□□ -0.8
PRKCH-222ENST00000556778 GSTTP1A0A1W2PQM5 241 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 MOXD2PA6NHM9 499 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 H0YGN5 161 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 NKRFO15226 690 aaKnown RBP eCLIP10.02□□□□□ -0.81
PRKCH-222ENST00000556778 MSH4O15457 936 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 SLC37A4O43826 429 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 PQBP1O60828 265 aaKnown RBP10.02□□□□□ -0.81
PRKCH-222ENST00000556778 CCNE2O96020 404 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 XBP1P17861 261 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 ATP2B1P20020 1258 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 ITGB8P26012 769 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 CIITAP33076 1130 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 MCM2P49736 904 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 CPT1AP50416 773 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 CDK7P50613 346 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 USP11P51784 963 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 RTP1P59025 263 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 TLE2Q04725 743 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 CUL4AQ13619 759 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 NONOQ15233 471 aaKnown RBP eCLIP10.02□□□□□ -0.81
PRKCH-222ENST00000556778 LETM2Q2VYF4 491 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 NBPF20Q3BBV1 942 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 UTP14CQ5TAP6 766 aaKnown RBP10.02□□□□□ -0.81
PRKCH-222ENST00000556778 GALNT17Q6IS24 598 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 TRIM50Q86XT4 487 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 PCSK9Q8NBP7 692 aaKnown RBP10.02□□□□□ -0.81
PRKCH-222ENST00000556778 PPTC7Q8NI37 304 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 GLT1D1Q96MS3 346 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 C16orf70Q9BSU1 422 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 TRPV6Q9H1D0 765 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 EHMT1Q9H9B1 1298 aa10.02□□□□□ -0.81
PRKCH-222ENST00000556778 NPDC1Q9NQX5 325 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-222ENST00000556778 ZMYND8Q9ULU4 1186 aaPredicted RBP10.02□□□□□ -0.81
PRKCH-222ENST00000556778 CCDC194A0A1B0GVG4 234 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 K7ELQ4 463 aaPredicted RBP10.01□□□□□ -0.81
PRKCH-222ENST00000556778 HMGN5P82970 282 aaKnown RBP10.01□□□□□ -0.81
PRKCH-222ENST00000556778 ZNF200P98182 395 aaPredicted RBP10.01□□□□□ -0.81
PRKCH-222ENST00000556778 FAAP100Q0VG06 881 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 ITGA7Q13683 1181 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 TRIM29Q14134 588 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 NEDD9Q14511 834 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 SNX17Q15036 470 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 KCNV1Q6PIU1 500 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 METTL7BQ6UX53 244 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 KRT25Q7Z3Z0 450 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 PCYT2Q99447 389 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 SENP7Q9BQF6 1050 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 ZNF577Q9BSK1 485 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 MTG1Q9BT17 334 aaPredicted RBP10.01□□□□□ -0.81
PRKCH-222ENST00000556778 SMC3Q9UQE7 1217 aa10.01□□□□□ -0.81
PRKCH-222ENST00000556778 CYP3A7-CYP3A51PA0A087WV96 503 aa10□□□□□ -0.81
PRKCH-222ENST00000556778 TRIM43BA6NCK2 446 aa10□□□□□ -0.81
PRKCH-222ENST00000556778 ARVCFO00192 962 aa10□□□□□ -0.81
PRKCH-222ENST00000556778 IPO5O00410 1097 aaKnown RBP10□□□□□ -0.81
PRKCH-222ENST00000556778 MAFGO15525 162 aa10□□□□□ -0.81
PRKCH-222ENST00000556778 ZEB2O60315 1214 aa10□□□□□ -0.81
PRKCH-222ENST00000556778 CCNT1O60563 726 aaKnown RBP10□□□□□ -0.81
PRKCH-222ENST00000556778 PPFIA4O75335 1185 aa10□□□□□ -0.81
PRKCH-222ENST00000556778 LGALS2P05162 132 aa10□□□□□ -0.81
PRKCH-222ENST00000556778 CAPN2P17655 700 aa10□□□□□ -0.81
PRKCH-222ENST00000556778 CYP3A7P24462 503 aa10□□□□□ -0.81
PRKCH-222ENST00000556778 TCF7P36402 384 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms