RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 KATNAL1Q9BW62 490 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 RNPEPQ9H4A4 650 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 SLC9A2Q9UBY0 812 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 SZT2Q5T011 3432 aa12.2□□□□□ -0.46
GABRB3-211ENST00000556636 LAMA2P24043 3122 aaKnown RBP12.19□□□□□ -0.46
GABRB3-211ENST00000556636 IGKV6D-21A0A0A0MT36 114 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 IPO5O00410 1097 aaKnown RBP12.19□□□□□ -0.46
GABRB3-211ENST00000556636 CD2BP2O95400 341 aaKnown RBP12.19□□□□□ -0.46
GABRB3-211ENST00000556636 CCL23P55773 120 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 ACTR2P61160 394 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 ADAM17P78536 824 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 FPGSQ05932 587 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 GPNMBQ14956 572 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 TRIM71Q2Q1W2 868 aaKnown RBP12.19□□□□□ -0.46
GABRB3-211ENST00000556636 LRIT3Q3SXY7 679 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 PRR16Q569H4 304 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 EARS2Q5JPH6 523 aaKnown RBP12.19□□□□□ -0.46
GABRB3-211ENST00000556636 CCDC83Q8IWF9 413 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 C7orf31Q8N865 590 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 TNFRSF25Q93038 417 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 WNT8BQ93098 351 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 ZSCAN31Q96LW9 406 aaPredicted RBP12.19□□□□□ -0.46
GABRB3-211ENST00000556636 MBOAT7Q96N66 472 aa12.19□□□□□ -0.46
GABRB3-211ENST00000556636 JPH1Q9HDC5 661 aaPredicted RBP12.19□□□□□ -0.46
GABRB3-211ENST00000556636 RBAK-RBAKDNI3L0D1 243 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 IQCF3P0C7M6 154 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 SMIM10L2AP0DMW4 78 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 SMIM10L2BP0DMW5 78 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 ACRP10323 421 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 RBL2Q08999 1139 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 NR5A1Q13285 461 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 TMEM240Q5SV17 173 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 ABHD15Q6UXT9 468 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 TMEM199Q8N511 208 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 WASF1Q92558 559 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 SCLYQ96I15 445 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.18□□□□□ -0.46
GABRB3-211ENST00000556636 SDF4Q9BRK5 362 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 LLPHQ9BRT6 129 aaKnown RBP12.18□□□□□ -0.46
GABRB3-211ENST00000556636 SH2B1Q9NRF2 756 aaPredicted RBP12.18□□□□□ -0.46
GABRB3-211ENST00000556636 LTBP2Q14767 1821 aa12.18□□□□□ -0.46
GABRB3-211ENST00000556636 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 MSH4O15457 936 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 TREHO43280 583 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 TDP2O95551 362 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 XBP1P17861 261 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 SETQ01105 290 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-211ENST00000556636 PTK7Q13308 1070 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 PPIGQ13427 754 aaKnown RBP eCLIP12.17□□□□□ -0.46
GABRB3-211ENST00000556636 NONOQ15233 471 aaKnown RBP eCLIP12.17□□□□□ -0.46
GABRB3-211ENST00000556636 INF2Q27J81 1249 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 Q4G0T1 1027 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 RASIP1Q5U651 963 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 KRT40Q6A162 431 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 TRAF7Q6Q0C0 670 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 MOXD1Q6UVY6 613 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 ZNF365Q70YC5 407 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 PLPPR4Q7Z2D5 763 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 KRT25Q7Z3Z0 450 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 IL27Q8NEV9 243 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 GJA10Q969M2 543 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 LRCH3Q96II8 777 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 ZNF577Q9BSK1 485 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 SMARCAD1Q9H4L7 1026 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 UPF2Q9HAU5 1272 aaKnown RBP12.17□□□□□ -0.46
GABRB3-211ENST00000556636 IL23AQ9NPF7 189 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 TBC1D22BQ9NU19 505 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 SETD4Q9NVD3 440 aa12.17□□□□□ -0.46
GABRB3-211ENST00000556636 EMSYQ7Z589 1322 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 C17orf102A2RUQ5 167 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 BTBD18B2RXH4 712 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 DDX39AO00148 427 aaKnown RBP12.16□□□□□ -0.46
GABRB3-211ENST00000556636 MMP1P03956 469 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 CKBP12277 381 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 ATP4AP20648 1035 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 BFSP2Q13515 415 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 MARCH8Q5T0T0 291 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 B3GNT9Q6UX72 402 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 PIK3AP1Q6ZUJ8 805 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 SERINC5Q86VE9 423 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 CAGE1Q8TC20 777 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 SLC5A5Q92911 643 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 ATP6V0A1Q93050 837 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 ERAP1Q9NZ08 941 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 ZNF215Q9UL58 517 aaPredicted RBP12.16□□□□□ -0.46
GABRB3-211ENST00000556636 NOD1Q9Y239 953 aa12.16□□□□□ -0.46
GABRB3-211ENST00000556636 NRCAMQ92823 1304 aa12.15□□□□□ -0.46
GABRB3-211ENST00000556636 DOCK5Q9H7D0 1870 aa12.15□□□□□ -0.46
GABRB3-211ENST00000556636 PSMD10O75832 226 aa12.15□□□□□ -0.46
GABRB3-211ENST00000556636 MARK3P27448 753 aa12.15□□□□□ -0.46
GABRB3-211ENST00000556636 STAT5BP51692 787 aa12.15□□□□□ -0.46
GABRB3-211ENST00000556636 PLCB4Q15147 1175 aa12.15□□□□□ -0.46
GABRB3-211ENST00000556636 ZNF618Q5T7W0 954 aa12.15□□□□□ -0.46
GABRB3-211ENST00000556636 PPP4R3AQ6IN85 833 aa12.15□□□□□ -0.46
GABRB3-211ENST00000556636 ZNF746Q6NUN9 644 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-211ENST00000556636 CCDC60Q8IWA6 550 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-211ENST00000556636 RETREG2Q8NC44 543 aa12.15□□□□□ -0.46
GABRB3-211ENST00000556636 ETNPPLQ8TBG4 499 aa12.15□□□□□ -0.46
GABRB3-211ENST00000556636 AFAP1L1Q8TED9 768 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms