RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CTAGE1Q96RT6 745 aa17.26■□□□□ 0.35
ACTN1-217ENST00000556203 ZNF577Q9BSK1 485 aa17.26■□□□□ 0.35
ACTN1-217ENST00000556203 WNT8AQ9H1J5 351 aa17.26■□□□□ 0.35
ACTN1-217ENST00000556203 IPO5O00410 1097 aaKnown RBP17.25■□□□□ 0.35
ACTN1-217ENST00000556203 SMIM10L2AP0DMW4 78 aa17.25■□□□□ 0.35
ACTN1-217ENST00000556203 SMIM10L2BP0DMW5 78 aa17.25■□□□□ 0.35
ACTN1-217ENST00000556203 FXR1P51114 621 aaKnown RBP eCLIP17.25■□□□□ 0.35
ACTN1-217ENST00000556203 ACTR2P61160 394 aa17.25■□□□□ 0.35
ACTN1-217ENST00000556203 ZNF200P98182 395 aaPredicted RBP17.25■□□□□ 0.35
ACTN1-217ENST00000556203 HIC1Q14526 733 aa17.25■□□□□ 0.35
ACTN1-217ENST00000556203 SHHQ15465 462 aa17.25■□□□□ 0.35
ACTN1-217ENST00000556203 OXER1Q8TDS5 423 aa17.25■□□□□ 0.35
ACTN1-217ENST00000556203 GLG1Q92896 1179 aa17.25■□□□□ 0.35
ACTN1-217ENST00000556203 LENG9Q96B70 501 aa17.25■□□□□ 0.35
ACTN1-217ENST00000556203 LLPHQ9BRT6 129 aaKnown RBP17.25■□□□□ 0.35
ACTN1-217ENST00000556203 BACH2Q9BYV9 841 aa17.25■□□□□ 0.35
ACTN1-217ENST00000556203 CCDC194A0A1B0GVG4 234 aa17.24■□□□□ 0.35
ACTN1-217ENST00000556203 C17orf102A2RUQ5 167 aa17.24■□□□□ 0.35
ACTN1-217ENST00000556203 CCNE2O96020 404 aa17.24■□□□□ 0.35
ACTN1-217ENST00000556203 MARK3P27448 753 aa17.24■□□□□ 0.35
ACTN1-217ENST00000556203 BFSP2Q13515 415 aa17.24■□□□□ 0.35
ACTN1-217ENST00000556203 TRIM29Q14134 588 aa17.24■□□□□ 0.35
ACTN1-217ENST00000556203 INF2Q27J81 1249 aa17.24■□□□□ 0.35
ACTN1-217ENST00000556203 PIK3AP1Q6ZUJ8 805 aa17.24■□□□□ 0.35
ACTN1-217ENST00000556203 SCLYQ96I15 445 aa17.24■□□□□ 0.35
ACTN1-217ENST00000556203 SMARCAD1Q9H4L7 1026 aa17.24■□□□□ 0.35
ACTN1-217ENST00000556203 BRMS1Q9HCU9 246 aa17.24■□□□□ 0.35
ACTN1-217ENST00000556203 MYH7BA7E2Y1 1941 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 DHX15O43143 795 aaKnown RBP17.23■□□□□ 0.35
ACTN1-217ENST00000556203 LGR5O75473 907 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 TDP2O95551 362 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 ACRP10323 421 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 KRT2P35908 639 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 IL27Q8NEV9 243 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 CAGE1Q8TC20 777 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 DHX38Q92620 1227 aaKnown RBP17.23■□□□□ 0.35
ACTN1-217ENST00000556203 PCYT2Q99447 389 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 RNPEPQ9H4A4 650 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 AZI2Q9H6S1 392 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 TBC1D22BQ9NU19 505 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 ERAP1Q9NZ08 941 aa17.23■□□□□ 0.35
ACTN1-217ENST00000556203 EMSYQ7Z589 1322 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 PITPNM1O00562 1244 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 SOX1O00570 391 aaPredicted RBP17.22■□□□□ 0.35
ACTN1-217ENST00000556203 MSH4O15457 936 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 CD2BP2O95400 341 aaKnown RBP17.22■□□□□ 0.35
ACTN1-217ENST00000556203 MMP1P03956 469 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 HOXC8P31273 242 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 NR5A1Q13285 461 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 PTK7Q13308 1070 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 LETM2Q2VYF4 491 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 LRIT3Q3SXY7 679 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 Q4G0T1 1027 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 KRT40Q6A162 431 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 C16orf59Q7L2K0 433 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 CCDC155Q8N6L0 562 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 ATP6V0A1Q93050 837 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 RNPC3Q96LT9 517 aaKnown RBP17.22■□□□□ 0.35
ACTN1-217ENST00000556203 IL23AQ9NPF7 189 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 SETD4Q9NVD3 440 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 TRIOBPQ9H2D6 2365 aa17.22■□□□□ 0.35
ACTN1-217ENST00000556203 DOCK5Q9H7D0 1870 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 CYP3A7-CYP3A51PA0A087WV96 503 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 ATG7O95352 703 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 IQCF3P0C7M6 154 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 GNAT1P11488 350 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 CYP3A7P24462 503 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 STAT5BP51692 787 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 HMGN5P82970 282 aaKnown RBP17.21■□□□□ 0.35
ACTN1-217ENST00000556203 EARS2Q5JPH6 523 aaKnown RBP17.21■□□□□ 0.35
ACTN1-217ENST00000556203 MIS18BP1Q6P0N0 1132 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 MOXD1Q6UVY6 613 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 NEK8Q86SG6 692 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 TNFRSF25Q93038 417 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 WNT8BQ93098 351 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.21■□□□□ 0.35
ACTN1-217ENST00000556203 DDX25Q9UHL0 483 aaKnown RBP17.21■□□□□ 0.35
ACTN1-217ENST00000556203 TCEAL9Q9UHQ7 104 aa17.21■□□□□ 0.35
ACTN1-217ENST00000556203 RANBP2P49792 3224 aaKnown RBP17.21■□□□□ 0.35
ACTN1-217ENST00000556203 FAM205CA6NFA0 338 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 BTBD18B2RXH4 712 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 BACH1O14867 736 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 TREHO43280 583 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 KRT76Q01546 638 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 GUCY1B3Q02153 619 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 PPFIA1Q13136 1202 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 TRIM71Q2Q1W2 868 aaKnown RBP17.2■□□□□ 0.34
ACTN1-217ENST00000556203 TMEM240Q5SV17 173 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 ZNF746Q6NUN9 644 aaPredicted RBP17.2■□□□□ 0.34
ACTN1-217ENST00000556203 PSRC1Q6PGN9 363 aaPredicted RBP17.2■□□□□ 0.34
ACTN1-217ENST00000556203 ABHD15Q6UXT9 468 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 ZNF365Q70YC5 407 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 PLPPR4Q7Z2D5 763 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 DEFB128Q7Z7B8 93 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 SERINC5Q86VE9 423 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 DIS3L2Q8IYB7 885 aaKnown RBP17.2■□□□□ 0.34
ACTN1-217ENST00000556203 RPUSD2Q8IZ73 545 aaKnown RBP17.2■□□□□ 0.34
ACTN1-217ENST00000556203 FAM184AQ8NB25 1140 aa17.2■□□□□ 0.34
ACTN1-217ENST00000556203 AFAP1L1Q8TED9 768 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms