RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TSPY26PQ9H489 355 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 BRMS1Q9HCU9 246 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 DDX19AQ9NUU7 478 aaKnown RBP7.79□□□□□ -1.16
SLIRP-204ENST00000555890 SEPT3Q9UH03 358 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 GABRQQ9UN88 632 aa7.79□□□□□ -1.16
SLIRP-204ENST00000555890 V9GY48 417 aaPredicted RBP7.79□□□□□ -1.16
SLIRP-204ENST00000555890 EP300Q09472 2414 aaPredicted RBP7.78□□□□□ -1.16
SLIRP-204ENST00000555890 CEP250Q9BV73 2442 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 CLRN2A0PK11 232 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 NMT2O60551 498 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 TOP1P11387 765 aaKnown RBP7.78□□□□□ -1.16
SLIRP-204ENST00000555890 XRCC6P12956 609 aaKnown RBP eCLIP7.78□□□□□ -1.16
SLIRP-204ENST00000555890 ME1P48163 572 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 NASPP49321 788 aaPredicted RBP7.78□□□□□ -1.16
SLIRP-204ENST00000555890 ARHGAP4P98171 946 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 MOGSQ13724 837 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 VGLL4Q14135 290 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 RASA3Q14644 834 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 GRM4Q14833 912 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 ANO1Q5XXA6 986 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 PTCRAQ6ISU1 281 aaPredicted RBP7.78□□□□□ -1.16
SLIRP-204ENST00000555890 RCSD1Q6JBY9 416 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 APOBEC3HQ6NTF7 200 aaKnown RBP7.78□□□□□ -1.16
SLIRP-204ENST00000555890 CCDC73Q6ZRK6 1079 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 GAS2L3Q86XJ1 694 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 RGL4Q8IZJ4 473 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 SLC44A5Q8NCS7 719 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.78□□□□□ -1.161e-8■■■■■ 34
SLIRP-204ENST00000555890 CCDC17Q96LX7 622 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 AIFM3Q96NN9 605 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 OSBPL5Q9H0X9 879 aaPredicted RBP7.78□□□□□ -1.16
SLIRP-204ENST00000555890 NUP62CLQ9H1M0 184 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 FOXP1Q9H334 677 aaPredicted RBP7.78□□□□□ -1.16
SLIRP-204ENST00000555890 ZCCHC17Q9NP64 241 aaKnown RBP7.78□□□□□ -1.16
SLIRP-204ENST00000555890 IL17RBQ9NRM6 502 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 CPA4Q9UI42 421 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 SERPINB13Q9UIV8 391 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 STX8Q9UNK0 236 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 MGAMO43451 1857 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 PLXNA3P51805 1871 aa7.78□□□□□ -1.16
SLIRP-204ENST00000555890 TEX15Q9BXT5 2789 aa7.77□□□□□ -1.16
SLIRP-204ENST00000555890 A0A1W2PQ27 194 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 A0A1W2PQ64 194 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 A0A1W2PQD8 194 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 ESPNB1AK53 854 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 KIF28PB7ZC32 967 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 LCE2BO14633 110 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 SPTLC2O15270 562 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 CTAGE5O15320 804 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 PLEKHA8P1O95397 391 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 ADH1BP00325 375 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 SMARCA1P28370 1054 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 KRT2P35908 639 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 SLC39A14Q15043 492 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 AGERQ15109 404 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 DLGAP5Q15398 846 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 RILPL1Q5EBL4 403 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 ADALQ6DHV7 355 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 FOXP4Q8IVH2 680 aaPredicted RBP7.77□□□□□ -1.17
SLIRP-204ENST00000555890 NOSTRINQ8IVI9 506 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 CCAR1Q8IX12 1150 aaKnown RBP7.77□□□□□ -1.17
SLIRP-204ENST00000555890 DIS3L2Q8IYB7 885 aaKnown RBP7.77□□□□□ -1.17
SLIRP-204ENST00000555890 FAM177A1Q8N128 213 aaPredicted RBP7.77□□□□□ -1.17
SLIRP-204ENST00000555890 CMTR1Q8N1G2 835 aaKnown RBP7.77□□□□□ -1.17
SLIRP-204ENST00000555890 FBXL6Q8N531 539 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.77□□□□□ -1.17
SLIRP-204ENST00000555890 LINC00301Q8NCQ3 95 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 SREK1Q8WXA9 508 aaKnown RBP7.77□□□□□ -1.17
SLIRP-204ENST00000555890 PGBD1Q96JS3 809 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 DRC1Q96MC2 740 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 TMEM47Q9BQJ4 181 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 MKNK1Q9BUB5 465 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 IDI2Q9BXS1 227 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 PBX4Q9BYU1 374 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 EHD4Q9H223 541 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 TNMDQ9H2S6 317 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 GJB4Q9NTQ9 266 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 TMOD2Q9NZR1 351 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 CDV3Q9UKY7 258 aaKnown RBP7.77□□□□□ -1.17
SLIRP-204ENST00000555890 SRPK3Q9UPE1 567 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 PCDHB11Q9Y5F2 797 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 SNCAIPQ9Y6H5 919 aa7.77□□□□□ -1.17
SLIRP-204ENST00000555890 TRIOO75962 3097 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 PLIN4Q96Q06 1357 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 BTBD18B2RXH4 712 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 TAF4O00268 1085 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 KINO60870 393 aaKnown RBP7.76□□□□□ -1.17
SLIRP-204ENST00000555890 PPP6R2O75170 966 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 ENTPD3O75355 529 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 RECKO95980 971 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 PARP1P09874 1014 aaKnown RBP7.76□□□□□ -1.17
SLIRP-204ENST00000555890 CCDC192P0DO97 292 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 BCRP11274 1271 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 SCG2P13521 617 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 LIG1P18858 919 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 CALML3P27482 149 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 GUCY1A2P33402 732 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 TAGLNQ01995 201 aaKnown RBP7.76□□□□□ -1.17
SLIRP-204ENST00000555890 KCNC4Q03721 635 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 GABPAQ06546 454 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms