RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 ACVR2BQ13705 512 aa8.31□□□□□ -1.08
ATXN3-224ENST00000554040 RSPO4Q2I0M5 234 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-224ENST00000554040 IER5Q5VY09 327 aa8.31□□□□□ -1.08
ATXN3-224ENST00000554040 NOC4LQ9BVI4 516 aaKnown RBP8.31□□□□□ -1.08
ATXN3-224ENST00000554040 ZHX1Q9UKY1 873 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-224ENST00000554040 USP34Q70CQ2 3546 aa8.31□□□□□ -1.08
ATXN3-224ENST00000554040 SPDYE3A6NKU9 549 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 CTAGE5O15320 804 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 CABYRO75952 493 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 POLR3DP05423 398 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-224ENST00000554040 ZAP70P43403 619 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 G3BP1Q13283 466 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATXN3-224ENST00000554040 GRB10Q13322 594 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 MTX1Q13505 466 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 TTLL4Q14679 1199 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 RTN1Q16799 776 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 PRRT3Q5FWE3 981 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 CCDC158Q5M9N0 1113 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 NKAPLQ5M9Q1 402 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 TTC39AQ5SRH9 613 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 SIAH1Q8IUQ4 282 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 FAM178BQ8IXR5 827 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 SPICE1Q8N0Z3 855 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 MIGA1Q8NAN2 632 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 ARNTL2Q8WYA1 636 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 MEIS3Q99687 375 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 SEZ6LQ9BYH1 1024 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 GSX2Q9BZM3 304 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 VCPKMTQ9H867 229 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 PIH1D3Q9NQM4 214 aaKnown RBP8.3□□□□□ -1.08
ATXN3-224ENST00000554040 TPSG1Q9NRR2 321 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 NAGPAQ9UK23 515 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 TMX2Q9Y320 296 aa8.3□□□□□ -1.08
ATXN3-224ENST00000554040 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-224ENST00000554040 USP17L12C9JPN9 530 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 USP17L21D6R901 530 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 TGFBR3LH3BV60 316 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 VWA5AO00534 786 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 WDR46O15213 610 aaKnown RBP8.29□□□□□ -1.08
ATXN3-224ENST00000554040 ADCY6O43306 1168 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 LPXNO60711 386 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 PFKMP08237 780 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 TAP1Q03518 808 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 ITGA7Q13683 1181 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 CCDC144BQ3MJ40 725 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 ALDH1L2Q3SY69 923 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 TMEM179Q6ZVK1 233 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 REPS2Q8NFH8 660 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 PHOSPHO2Q8TCD6 241 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 DDX11Q96FC9 970 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 SCLYQ96I15 445 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 ZNF512BQ96KM6 892 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-224ENST00000554040 TRPV6Q9H1D0 765 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 WNT8AQ9H1J5 351 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 ABHD16BQ9H3Z7 469 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 GPR108Q9NPR9 543 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 LMCD1Q9NZU5 365 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 ZNF214Q9UL59 606 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-224ENST00000554040 SLC6A14Q9UN76 642 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 RBM19Q9Y4C8 960 aaKnown RBP8.29□□□□□ -1.08
ATXN3-224ENST00000554040 GRIN2DO15399 1336 aa8.29□□□□□ -1.08
ATXN3-224ENST00000554040 CACNA1HO95180 2353 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 CFAP54Q96N23 3096 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 DNAJC25-GNG10A0A024R161 153 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 A6NJR5 290 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 KIF28PB7ZC32 967 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 B4GALT4O60513 344 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 BEX3Q00994 111 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 GRIK4Q16099 956 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 LEXMQ3ZCV2 418 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 CXCL17Q6UXB2 119 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 MAGEB6Q8N7X4 407 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-224ENST00000554040 DBNDD2Q9BQY9 259 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 SH2D4AQ9H788 454 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 FBXO28Q9NVF7 368 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 PPP1R9AQ9ULJ8 1098 aa8.28□□□□□ -1.08
ATXN3-224ENST00000554040 NOB1Q9ULX3 412 aaKnown RBP8.28□□□□□ -1.08
ATXN3-224ENST00000554040 ZEB2O60315 1214 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 IDH1O75874 414 aaKnown RBP8.27□□□□□ -1.09
ATXN3-224ENST00000554040 GNAI3P08754 354 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 ICA1Q05084 483 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 FOXD4L6Q3SYB3 417 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-224ENST00000554040 TNNI3KQ59H18 835 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 TMED8Q6PL24 325 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-224ENST00000554040 FOXD4L3Q6VB84 417 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-224ENST00000554040 ANKMY2Q8IV38 441 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 SLC9A7Q96T83 725 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 HINFPQ9BQA5 517 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 TEX13BQ9BXU2 312 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 UBE2ZQ9H832 354 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-224ENST00000554040 MRS2Q9HD23 443 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 MCM9Q9NXL9 1143 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 DNAJB12Q9NXW2 375 aaKnown RBP8.27□□□□□ -1.09
ATXN3-224ENST00000554040 FPGT-TNNI3KV9GXZ4 949 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 ZNFX1Q9P2E3 1918 aaKnown RBP8.27□□□□□ -1.09
ATXN3-224ENST00000554040 ASTN1O14525 1302 aa8.27□□□□□ -1.09
ATXN3-224ENST00000554040 DCXO43602 365 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 LILRB5O75023 590 aa8.26□□□□□ -1.09
ATXN3-224ENST00000554040 ACTN1P12814 892 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms