RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PALM3A6NDB9 673 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-208ENST00000553370 H3BRB1 525 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 OPLAHO14841 1288 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 PPP1R11O60927 126 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-208ENST00000553370 ARHGEF15O94989 841 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 LGALS2P05162 132 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 SMIM10L2AP0DMW4 78 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 SMIM10L2BP0DMW5 78 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 TGFB3P10600 412 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 NEDD9Q14511 834 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 UTP14CQ5TAP6 766 aaKnown RBP11.43□□□□□ -0.58
ACTN1-208ENST00000553370 EP400NLQ6ZTU2 488 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 VSIG10LQ86VR7 867 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 YME1L1Q96TA2 773 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 TUT1Q9H6E5 874 aaKnown RBP11.43□□□□□ -0.58
ACTN1-208ENST00000553370 INSL6Q9Y581 213 aa11.43□□□□□ -0.58
ACTN1-208ENST00000553370 LINC01553A4QN01 128 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 E7EWF7 191 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 HAS3O00219 553 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 FIBPO43427 364 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 STAM2O75886 525 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 UPP2O95045 317 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 CYP21A2P08686 494 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 POU3F3P20264 500 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-208ENST00000553370 ARHGAP4P98171 946 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 PTPROQ16827 1216 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 CYFIP1Q7L576 1253 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 SPRED2Q7Z698 418 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 NLRX1Q86UT6 975 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 SERINC5Q86VE9 423 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 CTAGE1Q96RT6 745 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 USP26Q9BXU7 913 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 HCN4Q9Y3Q4 1203 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 KIAA1671Q9BY89 1806 aa11.42□□□□□ -0.58
ACTN1-208ENST00000553370 MUC6Q6W4X9 2439 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 CCDC69A6NI79 296 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 RGS20O76081 388 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 BMP1P13497 986 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 GSPT1P15170 499 aaKnown RBP11.41□□□□□ -0.58
ACTN1-208ENST00000553370 SSTR3P32745 418 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-208ENST00000553370 ERVK-21P61565 698 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 GHRHRQ02643 423 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 TRIM71Q2Q1W2 868 aaKnown RBP11.41□□□□□ -0.58
ACTN1-208ENST00000553370 METTL7BQ6UX53 244 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 DBF4BQ8NFT6 615 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 GPKOWQ92917 476 aaPredicted RBP eCLIP11.41□□□□□ -0.58
ACTN1-208ENST00000553370 WNT8BQ93098 351 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 FAM122AQ96E09 287 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 MTMR8Q96EF0 704 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 IL25Q9H293 177 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 RIOX1Q9H6W3 641 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 RTEL1Q9NZ71 1219 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 LMCD1Q9NZU5 365 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 RAPGEFL1Q9UHV5 662 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 WDR81Q562E7 1941 aa11.41□□□□□ -0.58
ACTN1-208ENST00000553370 TREHO43280 583 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 CAND2O75155 1236 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 DDAH1O94760 285 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 HOXD8P13378 290 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-208ENST00000553370 KCNA5P22460 613 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 FECHP22830 423 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 CHMLP26374 656 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 GNAQP50148 359 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 SP2Q02086 613 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 PTH1RQ03431 593 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 TCTN1Q2MV58 587 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 TIGD5Q53EQ6 642 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.4□□□□□ -0.586e-6■□□□□ 8.2
ACTN1-208ENST00000553370 RSPH3Q86UC2 560 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 TRIM50Q86XT4 487 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 ZNF654Q8IZM8 581 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 GIMAP8Q8ND71 665 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-208ENST00000553370 SLC39A7Q92504 469 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 C17orf80Q9BSJ5 609 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 C16orf70Q9BSU1 422 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 MYL10Q9BUA6 226 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 IFIH1Q9BYX4 1025 aaKnown RBP11.4□□□□□ -0.58
ACTN1-208ENST00000553370 UBE2ZQ9H832 354 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-208ENST00000553370 EHMT1Q9H9B1 1298 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 SETD4Q9NVD3 440 aa11.4□□□□□ -0.58
ACTN1-208ENST00000553370 TTC3P53804 2025 aa11.4□□□□□ -0.59
ACTN1-208ENST00000553370 SPDYE3A6NKU9 549 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 PRC1O43663 620 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 MBTPS1Q14703 1052 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 GPNMBQ14956 572 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 TMEM92Q6UXU6 159 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 APBB2Q92870 758 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 GLG1Q92896 1179 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 CDHR1Q96JP9 859 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 SAMD11Q96NU1 681 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 GPR20Q99678 358 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 LZTS2Q9BRK4 669 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 SUGCTQ9HAC7 445 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 SENP2Q9HC62 589 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 PKD2L1Q9P0L9 805 aa11.39□□□□□ -0.59
ACTN1-208ENST00000553370 RBM8AQ9Y5S9 174 aaKnown RBP11.39□□□□□ -0.59
ACTN1-208ENST00000553370 SPATA31C2B4DYI2 1134 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 CYTH3O43739 400 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 LPXNO60711 386 aa11.38□□□□□ -0.59
ACTN1-208ENST00000553370 CALM1P0DP23 149 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms