RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 IGKV6D-21A0A0A0MT36 114 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 NOP56O00567 594 aaKnown RBP21.98■■□□□ 1.11
PTCH1-227ENST00000553256 CCNE2O96020 404 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 SMIM10L2AP0DMW4 78 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 SMIM10L2BP0DMW5 78 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 TCF7P36402 384 aaPredicted RBP21.98■■□□□ 1.11
PTCH1-227ENST00000553256 PTK7Q13308 1070 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 FAM109BQ6ICB4 259 aaPredicted RBP21.98■■□□□ 1.11
PTCH1-227ENST00000553256 SERINC5Q86VE9 423 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 NECAB1Q8N987 351 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 CAGE1Q8TC20 777 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 BICD2Q8TD16 824 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 PHF20Q9BVI0 1012 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 JPH1Q9HDC5 661 aaPredicted RBP21.98■■□□□ 1.11
PTCH1-227ENST00000553256 PKD2L1Q9P0L9 805 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 CXXC1Q9P0U4 656 aaPredicted RBP21.98■■□□□ 1.11
PTCH1-227ENST00000553256 EMSYQ7Z589 1322 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 RBAK-RBAKDNI3L0D1 243 aa21.97■■□□□ 1.11
PTCH1-227ENST00000553256 SMAD3P84022 425 aaKnown RBP21.97■■□□□ 1.11
PTCH1-227ENST00000553256 PSRC1Q6PGN9 363 aaPredicted RBP21.97■■□□□ 1.11
PTCH1-227ENST00000553256 RNPC3Q96LT9 517 aaKnown RBP21.97■■□□□ 1.11
PTCH1-227ENST00000553256 MBOAT7Q96N66 472 aa21.97■■□□□ 1.11
PTCH1-227ENST00000553256 GJB4Q9NTQ9 266 aa21.97■■□□□ 1.11
PTCH1-227ENST00000553256 SLC9A2Q9UBY0 812 aa21.97■■□□□ 1.11
PTCH1-227ENST00000553256 COL6A3P12111 3177 aa21.97■■□□□ 1.11
PTCH1-227ENST00000553256 TET1Q8NFU7 2136 aa21.97■■□□□ 1.11
PTCH1-227ENST00000553256 TRIP12Q14669 1992 aaPredicted RBP21.96■■□□□ 1.11
PTCH1-227ENST00000553256 SCN5AQ14524 2016 aa21.96■■□□□ 1.11
PTCH1-227ENST00000553256 CHMP4BP1P59074 171 aa21.96■■□□□ 1.11
PTCH1-227ENST00000553256 SP4Q02446 784 aa21.96■■□□□ 1.11
PTCH1-227ENST00000553256 BFSP2Q13515 415 aa21.96■■□□□ 1.11
PTCH1-227ENST00000553256 MBTPS1Q14703 1052 aa21.96■■□□□ 1.11
PTCH1-227ENST00000553256 CPLX2Q6PUV4 134 aaKnown RBP21.96■■□□□ 1.11
PTCH1-227ENST00000553256 BLIDQ8IZY5 108 aa21.96■■□□□ 1.11
PTCH1-227ENST00000553256 NSUN7Q8NE18 718 aaKnown RBP21.96■■□□□ 1.11
PTCH1-227ENST00000553256 AFAP1L1Q8TED9 768 aa21.96■■□□□ 1.11
PTCH1-227ENST00000553256 CDKL5O76039 1030 aa21.95■■□□□ 1.1
PTCH1-227ENST00000553256 CXCL10P02778 98 aa21.95■■□□□ 1.1
PTCH1-227ENST00000553256 CKBP12277 381 aa21.95■■□□□ 1.1
PTCH1-227ENST00000553256 RFC2P35250 354 aa21.95■■□□□ 1.1
PTCH1-227ENST00000553256 USP11P51784 963 aa21.95■■□□□ 1.1
PTCH1-227ENST00000553256 NLRP5P59047 1200 aa21.95■■□□□ 1.1
PTCH1-227ENST00000553256 ACTR2P61160 394 aa21.95■■□□□ 1.1
PTCH1-227ENST00000553256 UTP14CQ5TAP6 766 aaKnown RBP21.95■■□□□ 1.1
PTCH1-227ENST00000553256 GALNT17Q6IS24 598 aa21.95■■□□□ 1.1
PTCH1-227ENST00000553256 PLA2G4DQ86XP0 818 aa21.95■■□□□ 1.1
PTCH1-227ENST00000553256 KCNJ14Q9UNX9 436 aa21.95■■□□□ 1.1
PTCH1-227ENST00000553256 CYP3A7-CYP3A51PA0A087WV96 503 aa21.94■■□□□ 1.1
PTCH1-227ENST00000553256 TREHO43280 583 aa21.94■■□□□ 1.1
PTCH1-227ENST00000553256 NBNO60934 754 aa21.94■■□□□ 1.1
PTCH1-227ENST00000553256 SELPP16109 830 aa21.94■■□□□ 1.1
PTCH1-227ENST00000553256 CYP3A7P24462 503 aa21.94■■□□□ 1.1
PTCH1-227ENST00000553256 MARCH8Q5T0T0 291 aa21.94■■□□□ 1.1
PTCH1-227ENST00000553256 ABHD15Q6UXT9 468 aa21.94■■□□□ 1.1
PTCH1-227ENST00000553256 LMBR1Q8WVP7 490 aa21.94■■□□□ 1.1
PTCH1-227ENST00000553256 SETD4Q9NVD3 440 aa21.94■■□□□ 1.1
PTCH1-227ENST00000553256 C17orf102A2RUQ5 167 aa21.93■■□□□ 1.1
PTCH1-227ENST00000553256 MBLAC1A4D2B0 266 aaPredicted RBP21.93■■□□□ 1.1
PTCH1-227ENST00000553256 IPO5O00410 1097 aaKnown RBP21.93■■□□□ 1.1
PTCH1-227ENST00000553256 FGBP02675 491 aa21.93■■□□□ 1.1
PTCH1-227ENST00000553256 PFKMP08237 780 aa21.93■■□□□ 1.1
PTCH1-227ENST00000553256 TCTN1Q2MV58 587 aa21.93■■□□□ 1.1
PTCH1-227ENST00000553256 Q7L0L9 218 aa21.93■■□□□ 1.1
PTCH1-227ENST00000553256 RPUSD2Q8IZ73 545 aaKnown RBP21.93■■□□□ 1.1
PTCH1-227ENST00000553256 TBCKQ8TEA7 893 aa21.93■■□□□ 1.1
PTCH1-227ENST00000553256 TNFRSF25Q93038 417 aa21.93■■□□□ 1.1
PTCH1-227ENST00000553256 C22orf23Q9BZE7 217 aa21.93■■□□□ 1.1
PTCH1-227ENST00000553256 ZNF215Q9UL58 517 aaPredicted RBP21.93■■□□□ 1.1
PTCH1-227ENST00000553256 NOD1Q9Y239 953 aa21.93■■□□□ 1.1
PTCH1-227ENST00000553256 NRCAMQ92823 1304 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 JAK2O60674 1132 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 SETQ01105 290 aaPredicted RBP21.92■■□□□ 1.1
PTCH1-227ENST00000553256 MKRN4PQ13434 485 aaPredicted RBP21.92■■□□□ 1.1
PTCH1-227ENST00000553256 ZNF618Q5T7W0 954 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 B3GNT9Q6UX72 402 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 LRRC8DQ7L1W4 858 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 PLPPR4Q7Z2D5 763 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 RPAINQ86UA6 219 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 OXER1Q8TDS5 423 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 SDF4Q9BRK5 362 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 SMARCAD1Q9H4L7 1026 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 MTMR10Q9NXD2 777 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 ERAP1Q9NZ08 941 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 ORC3Q9UBD5 711 aaPredicted RBP21.92■■□□□ 1.1
PTCH1-227ENST00000553256 CHD7Q9P2D1 2997 aa21.92■■□□□ 1.1
PTCH1-227ENST00000553256 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.91■■□□□ 1.1
PTCH1-227ENST00000553256 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.91■■□□□ 1.1
PTCH1-227ENST00000553256 MSH4O15457 936 aa21.91■■□□□ 1.1
PTCH1-227ENST00000553256 ZNF76P36508 570 aa21.91■■□□□ 1.1
PTCH1-227ENST00000553256 Q4G0T1 1027 aa21.91■■□□□ 1.1
PTCH1-227ENST00000553256 PRR16Q569H4 304 aa21.91■■□□□ 1.1
PTCH1-227ENST00000553256 EARS2Q5JPH6 523 aaKnown RBP21.91■■□□□ 1.1
PTCH1-227ENST00000553256 MOXD1Q6UVY6 613 aa21.91■■□□□ 1.1
PTCH1-227ENST00000553256 OTOP2Q7RTS6 562 aa21.91■■□□□ 1.1
PTCH1-227ENST00000553256 RETREG2Q8NC44 543 aa21.91■■□□□ 1.1
PTCH1-227ENST00000553256 ATP6V0A1Q93050 837 aa21.91■■□□□ 1.1
PTCH1-227ENST00000553256 OSBPL7Q9BZF2 842 aa21.91■■□□□ 1.1
PTCH1-227ENST00000553256 TTYH1Q9H313 450 aaPredicted RBP21.91■■□□□ 1.1
PTCH1-227ENST00000553256 LIMCH1Q9UPQ0 1083 aa21.91■■□□□ 1.1
PTCH1-227ENST00000553256 GRXCR1A8MXD5 290 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms