RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 TSEN34Q9BSV6 310 aaKnown RBP11.25□□□□□ -0.61
LETMD1-234ENST00000552645 AGO4Q9HCK5 861 aaKnown RBP11.25□□□□□ -0.61
LETMD1-234ENST00000552645 STARD7Q9NQZ5 370 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 DDX25Q9UHL0 483 aaKnown RBP11.25□□□□□ -0.61
LETMD1-234ENST00000552645 PHF24Q9UPV7 400 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 TELO2Q9Y4R8 837 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 ALPK3Q96L96 1907 aa11.25□□□□□ -0.61
LETMD1-234ENST00000552645 A6NJR5 290 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 IPO5O00410 1097 aaKnown RBP11.24□□□□□ -0.61
LETMD1-234ENST00000552645 MAFGO15525 162 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 MARCH6O60337 910 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 PSMC6P62333 389 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 SETQ01105 290 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-234ENST00000552645 MLLT1Q03111 559 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-234ENST00000552645 DGKDQ16760 1214 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 CCSAPQ6IQ19 270 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-234ENST00000552645 METTL7BQ6UX53 244 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 NIPA1Q7RTP0 329 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 UBE2Q1Q7Z7E8 422 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 GJA10Q969M2 543 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 INTS4Q96HW7 963 aaKnown RBP11.24□□□□□ -0.61
LETMD1-234ENST00000552645 SENP7Q9BQF6 1050 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 FOXP1Q9H334 677 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-234ENST00000552645 JPH1Q9HDC5 661 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-234ENST00000552645 POLR3EQ9NVU0 708 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 TCEAL9Q9UHQ7 104 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 ATP11BQ9Y2G3 1177 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 PDE4DIPQ5VU43 2346 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 KIF28PB7ZC32 967 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 SLC37A4O43826 429 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 EDIL3O43854 480 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 COL6A1P12109 1028 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 CIITAP33076 1130 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 NUCB2P80303 420 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 ITGB3BPQ13352 177 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-234ENST00000552645 FAM47CQ5HY64 1035 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 NOSTRINQ8IVI9 506 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 IPO4Q8TEX9 1081 aaKnown RBP11.24□□□□□ -0.61
LETMD1-234ENST00000552645 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-234ENST00000552645 MTG1Q9BT17 334 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-234ENST00000552645 HTATIP2Q9BUP3 242 aa11.24□□□□□ -0.61
LETMD1-234ENST00000552645 MYH9P35579 1960 aaKnown RBP11.23□□□□□ -0.61
LETMD1-234ENST00000552645 KAT6AQ92794 2004 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 MSH4O15457 936 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 CHMP2AO43633 222 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 KPNA6O60684 536 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 GAS7O60861 476 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 PDCP20941 246 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 MCM7P33993 719 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 NKX3-2P78367 333 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 PURAQ00577 322 aaKnown RBP11.23□□□□□ -0.61
LETMD1-234ENST00000552645 LRRC26Q2I0M4 334 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 SLC39A5Q6ZMH5 540 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 LENG9Q96B70 501 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 GPR20Q99678 358 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 RBSNQ9H1K0 784 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 SLC9A2Q9UBY0 812 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 SAMM50Q9Y512 469 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 WDR81Q562E7 1941 aa11.23□□□□□ -0.61
LETMD1-234ENST00000552645 WNT7AO00755 349 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 EVI5O60447 810 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 PQBP1O60828 265 aaKnown RBP11.22□□□□□ -0.61
LETMD1-234ENST00000552645 PPFIA4O75335 1185 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 CABYRO75952 493 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 PDIA4P13667 645 aaKnown RBP11.22□□□□□ -0.61
LETMD1-234ENST00000552645 GCFC2P16383 781 aaKnown RBP11.22□□□□□ -0.61
LETMD1-234ENST00000552645 TCF7P36402 384 aaPredicted RBP11.22□□□□□ -0.61
LETMD1-234ENST00000552645 RGS19P49795 217 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 TRIM60Q495X7 471 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 Q4G0T1 1027 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 LRCH2Q5VUJ6 765 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 FERMT3Q86UX7 667 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 TRIM50Q86XT4 487 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 POTEDQ86YR6 584 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 C7orf61Q8IZ16 206 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 GLG1Q92896 1179 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 NAP1L4Q99733 375 aaKnown RBP11.22□□□□□ -0.61
LETMD1-234ENST00000552645 NFASCO94856 1347 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 CEP290O15078 2479 aa11.22□□□□□ -0.61
LETMD1-234ENST00000552645 SCN10AQ9Y5Y9 1956 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 CYP3A7-CYP3A51PA0A087WV96 503 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 NEMFO60524 1076 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 LGALS2P05162 132 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 SYT1P21579 422 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 CYP3A7P24462 503 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 U2AF2P26368 475 aaKnown RBP eCLIP11.21□□□□□ -0.61
LETMD1-234ENST00000552645 RTP1P59025 263 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 ACTR2P61160 394 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 ZNF174Q15697 407 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 FOXD4L5Q5VV16 416 aaPredicted RBP11.21□□□□□ -0.61
LETMD1-234ENST00000552645 PPP4R3AQ6IN85 833 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 MOXD1Q6UVY6 613 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 LRSAM1Q6UWE0 723 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 FOXD4L4Q8WXT5 416 aaPredicted RBP11.21□□□□□ -0.61
LETMD1-234ENST00000552645 SEPT1Q8WYJ6 367 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 TBC1D22BQ9NU19 505 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 ELP1O95163 1332 aa11.21□□□□□ -0.61
LETMD1-234ENST00000552645 TRIP12Q14669 1992 aaPredicted RBP11.21□□□□□ -0.61
LETMD1-234ENST00000552645 GSTTP1A0A1W2PQM5 241 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms