RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 MTG1Q9BT17 334 aaPredicted RBP13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 PDGFCQ9NRA1 345 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 SLC12A7Q9Y666 1083 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 SETXQ7Z333 2677 aaKnown RBP13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 CCDC69A6NI79 296 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 CXCL10P02778 98 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 XRCC6P12956 609 aaKnown RBP eCLIP13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 HOXB3P14651 431 aaPredicted RBP13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 METAP2P50579 478 aaKnown RBP eCLIP13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 HAND2P61296 217 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 HTRA4P83105 476 aaPredicted RBP13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 STK3Q13188 491 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 IKBKEQ14164 716 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 FAM83BQ5T0W9 1011 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 LRRC8DQ7L1W4 858 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 ZBTB33Q86T24 672 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 FBXO18Q8NFZ0 1043 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 TCEANC2Q96MN5 208 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 MKNK2Q9HBH9 465 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 DDX19AQ9NUU7 478 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 ZSWIM5Q9P217 1185 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 Q9Y3F1 56 aa13.69□□□□□ -0.22
RBFOX1-214ENST00000552089 GOLGA8BA8MQT2 603 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 RBAK-RBAKDNI3L0D1 243 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 ORC4O43929 436 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 NBNO60934 754 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 SELPP16109 830 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 ANTXR2P58335 489 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 CNTN2Q02246 1040 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 DNM1Q05193 864 aaKnown RBP13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 PDE4BQ07343 736 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 HS1BP3Q53T59 392 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 NFRKBQ6P4R8 1299 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 APOA5Q6Q788 366 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 FBXO16Q8IX29 292 aaPredicted RBP13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 TRIM22Q8IYM9 498 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 CPXCR1Q8N123 301 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 FAM133AQ8N9E0 248 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 SMRP1Q8NCR6 262 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 CAGE1Q8TC20 777 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 SPATA32Q96LK8 384 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 MAP3K14Q99558 947 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 UBAC1Q9BSL1 405 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 RCOR1Q9UKL0 485 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 PCDHGC5Q9Y5F6 944 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 MYH8P13535 1937 aa13.68□□□□□ -0.22
RBFOX1-214ENST00000552089 MYO7AQ13402 2215 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 IFIT3O14879 490 aaKnown RBP13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 RAD21O60216 631 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 CSPG5O95196 566 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 CTDNEP1O95476 244 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 LMNAP02545 664 aaKnown RBP13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 XBP1P17861 261 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 CCDC173Q0VFZ6 552 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 RESTQ13127 1097 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 TRIM29Q14134 588 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 RSPO4Q2I0M5 234 aaPredicted RBP13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 IQSEC1Q6DN90 963 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 MYOCDQ8IZQ8 938 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 C8orf76Q96K31 380 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 CCDC17Q96LX7 622 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 HINFPQ9BQA5 517 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 SLF1Q9BQI6 1058 aa13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 PHF7Q9BWX1 381 aaPredicted RBP13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 GPHNQ9NQX3 736 aaPredicted RBP13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 RBM28Q9NW13 759 aaKnown RBP13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 USP15Q9Y4E8 981 aaPredicted RBP13.67□□□□□ -0.22
RBFOX1-214ENST00000552089 ASB14A6NK59 587 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 AMHP03971 560 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 IFNAR1P17181 557 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 NASPP49321 788 aaPredicted RBP13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 ADAM15Q13444 863 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 WTAPQ15007 396 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 ASTLQ6HA08 431 aaPredicted RBP13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 NFXL1Q6ZNB6 911 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 EEPD1Q7L9B9 569 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 TBC1D10CQ8IV04 446 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 CHAMP1Q96JM3 812 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 YME1L1Q96TA2 773 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 LY9Q9HBG7 655 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 FBXO40Q9UH90 709 aa13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.66□□□□□ -0.22
RBFOX1-214ENST00000552089 B4E1Z4 1266 aa13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 PARNO95453 639 aaKnown RBP13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 YEATS4O95619 227 aa13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 CPT1AP50416 773 aa13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 PTPN11Q06124 597 aaPredicted RBP13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 PTGISQ16647 500 aa13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 FOXD4L5Q5VV16 416 aaPredicted RBP13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 TAPT1Q6NXT6 567 aa13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 LEO1Q8WVC0 666 aaPredicted RBP13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 FOXD4L4Q8WXT5 416 aaPredicted RBP13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 LMAN2LQ9H0V9 348 aa13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 RAVER2Q9HCJ3 691 aaKnown RBP13.65□□□□□ -0.22
RBFOX1-214ENST00000552089 RTEL1Q9NZ71 1219 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms