RNA–Protein interactions for RNA: ENST00000552045.1

LIMA1-210, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-210ENST00000552045 CMTR2Q8IYT2 770 aaKnown RBP8.04□□□□□ -1.12
LIMA1-210ENST00000552045 PIP4K2CQ8TBX8 421 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 ASB11Q8WXH4 323 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 SLC39A13Q96H72 371 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 HHIPL1Q96JK4 782 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 JMJD8Q96S16 334 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 MTA3Q9BTC8 594 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 G6PC3Q9BUM1 346 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 MS4A5Q9H3V2 200 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 SLC6A20Q9NP91 592 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 ACSS2Q9NR19 701 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 ZC3H7BQ9UGR2 993 aaKnown RBP8.04□□□□□ -1.12
LIMA1-210ENST00000552045 DSEQ9UL01 958 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 RWDD3Q9Y3V2 267 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 B3GALT1Q9Y5Z6 326 aa8.04□□□□□ -1.12
LIMA1-210ENST00000552045 A0A1W2PQ45 241 aaPredicted RBP8.03□□□□□ -1.12
LIMA1-210ENST00000552045 A0A1W2PQY0 241 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 SCDO00767 359 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 CLASP2O75122 1294 aaKnown RBP8.03□□□□□ -1.12
LIMA1-210ENST00000552045 H2AFYO75367 372 aaKnown RBP8.03□□□□□ -1.12
LIMA1-210ENST00000552045 LTFP02788 710 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 CORO7P57737 925 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 SYCP2LQ5T4T6 812 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 MROH9Q5TGP6 573 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 CPZQ66K79 652 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 AMOTL1Q8IY63 956 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 NLGN4XQ8N0W4 816 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.03□□□□□ -1.12
LIMA1-210ENST00000552045 DLG3Q92796 817 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 SYTL4Q96C24 671 aaPredicted RBP8.03□□□□□ -1.12
LIMA1-210ENST00000552045 HRASLS5Q96KN8 279 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 ZMAT4Q9H898 229 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 CHST12Q9NRB3 414 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 TPSG1Q9NRR2 321 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 ZBTB21Q9ULJ3 1066 aa8.03□□□□□ -1.12
LIMA1-210ENST00000552045 KLHL33A6NCF5 533 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 EIF3JO75822 258 aaKnown RBP8.02□□□□□ -1.13
LIMA1-210ENST00000552045 CYP17A1P05093 508 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 FSTP19883 344 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 PTX3P26022 381 aaPredicted RBP8.02□□□□□ -1.13
LIMA1-210ENST00000552045 GTF2H3Q13889 308 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 PDCD1Q15116 288 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 CC2D1AQ6P1N0 951 aaPredicted RBP8.02□□□□□ -1.13
LIMA1-210ENST00000552045 FRMD7Q6ZUT3 714 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 UHMK1Q8TAS1 419 aaKnown RBP8.02□□□□□ -1.13
LIMA1-210ENST00000552045 LINC01599Q8WXQ3 324 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 CLIP3Q96DZ5 547 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 HSPBAP1Q96EW2 488 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 NUP88Q99567 741 aaPredicted RBP8.02□□□□□ -1.13
LIMA1-210ENST00000552045 SP110Q9HB58 689 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 PRDM11Q9NQV5 511 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 PIM2Q9P1W9 311 aa8.02□□□□□ -1.13
LIMA1-210ENST00000552045 KRIT1O00522 736 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 XPOTO43592 962 aaKnown RBP8.01□□□□□ -1.13
LIMA1-210ENST00000552045 KDM1AO60341 852 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 VCAM1P19320 739 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 LPOP22079 712 aaPredicted RBP8.01□□□□□ -1.13
LIMA1-210ENST00000552045 CD40P25942 277 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 PRKCQQ04759 706 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 AOC3Q16853 763 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 EFCAB2Q5VUJ9 269 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 ESRP1Q6NXG1 681 aaKnown RBP8.01□□□□□ -1.13
LIMA1-210ENST00000552045 EPM2AIP1Q7L775 607 aaPredicted RBP8.01□□□□□ -1.13
LIMA1-210ENST00000552045 ZZZ3Q8IYH5 903 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 LZTR1Q8N653 840 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 USP33Q8TEY7 942 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 AIFM3Q96NN9 605 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 CD244Q9BZW8 370 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 ZNF700Q9H0M5 742 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 EBF1Q9UH73 591 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 ATP23Q9Y6H3 246 aa8.01□□□□□ -1.13
LIMA1-210ENST00000552045 LCHNA4D1U4 455 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 FOSL1P15407 271 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 KIR2DL1P43626 348 aaPredicted RBP8□□□□□ -1.13
LIMA1-210ENST00000552045 KIR2DL2P43627 348 aaPredicted RBP8□□□□□ -1.13
LIMA1-210ENST00000552045 HTRA3P83110 453 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 DUSP4Q13115 394 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 OS9Q13438 667 aaPredicted RBP8□□□□□ -1.13
LIMA1-210ENST00000552045 SEC23AQ15436 765 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 SAMD3Q8N6K7 520 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 ASIC4Q96FT7 647 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 ORAI2Q96SN7 254 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 ANLNQ9NQW6 1124 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 KCNH7Q9NS40 1196 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 CCM2LQ9NUG4 571 aaPredicted RBP8□□□□□ -1.13
LIMA1-210ENST00000552045 FBLN5Q9UBX5 448 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 VAV3Q9UKW4 847 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 INVSQ9Y283 1065 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 COMMD10Q9Y6G5 202 aa8□□□□□ -1.13
LIMA1-210ENST00000552045 IL33O95760 270 aa7.99□□□□□ -1.13
LIMA1-210ENST00000552045 RTP1P59025 263 aa7.99□□□□□ -1.13
LIMA1-210ENST00000552045 PURAQ00577 322 aaKnown RBP7.99□□□□□ -1.13
LIMA1-210ENST00000552045 DOC2BQ14184 412 aa7.99□□□□□ -1.13
LIMA1-210ENST00000552045 TMEM132BQ14DG7 1078 aa7.99□□□□□ -1.13
LIMA1-210ENST00000552045 CLUL1Q15846 466 aa7.99□□□□□ -1.13
LIMA1-210ENST00000552045 KCTD1Q719H9 257 aa7.99□□□□□ -1.13
LIMA1-210ENST00000552045 ZDHHC13Q8IUH4 622 aa7.99□□□□□ -1.13
LIMA1-210ENST00000552045 TEKT5Q96M29 485 aa7.99□□□□□ -1.13
LIMA1-210ENST00000552045 ACAP3Q96P50 834 aa7.99□□□□□ -1.13
LIMA1-210ENST00000552045 MPHOSPH6Q99547 160 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms