RNA–Protein interactions for RNA: ENST00000550795.1

PXN-217, Transcript of paxillin, humanhuman

TSL 3

Gene PXN, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-217ENST00000550795 SELPP16109 830 aa27.81■■■□□ 2.04
PXN-217ENST00000550795 RFC2P35250 354 aa27.81■■■□□ 2.04
PXN-217ENST00000550795 TCF7P36402 384 aaPredicted RBP27.81■■■□□ 2.04
PXN-217ENST00000550795 STK3Q13188 491 aa27.81■■■□□ 2.04
PXN-217ENST00000550795 PTK7Q13308 1070 aa27.81■■■□□ 2.04
PXN-217ENST00000550795 TRIM71Q2Q1W2 868 aaKnown RBP27.81■■■□□ 2.04
PXN-217ENST00000550795 MTIF3Q9H2K0 278 aaKnown RBP27.81■■■□□ 2.04
PXN-217ENST00000550795 NKX2-4Q9H2Z4 354 aa27.81■■■□□ 2.04
PXN-217ENST00000550795 RNPEPQ9H4A4 650 aa27.81■■■□□ 2.04
PXN-217ENST00000550795 PFKMP08237 780 aa27.8■■■□□ 2.04
PXN-217ENST00000550795 HOXC8P31273 242 aa27.8■■■□□ 2.04
PXN-217ENST00000550795 ARHGAP4P98171 946 aa27.8■■■□□ 2.04
PXN-217ENST00000550795 RBL2Q08999 1139 aa27.8■■■□□ 2.04
PXN-217ENST00000550795 CEP55Q53EZ4 464 aa27.8■■■□□ 2.04
PXN-217ENST00000550795 LRRC8DQ7L1W4 858 aa27.8■■■□□ 2.04
PXN-217ENST00000550795 FTOQ9C0B1 505 aaKnown RBP eCLIP27.8■■■□□ 2.04
PXN-217ENST00000550795 C6orf50Q9HD87 102 aa27.8■■■□□ 2.04
PXN-217ENST00000550795 C17orf102A2RUQ5 167 aa27.79■■■□□ 2.04
PXN-217ENST00000550795 ZBBXA8MT70 800 aa27.79■■■□□ 2.04
PXN-217ENST00000550795 RABGGTBP53611 331 aa27.79■■■□□ 2.04
PXN-217ENST00000550795 RAB30Q15771 203 aa27.79■■■□□ 2.04
PXN-217ENST00000550795 CCDC12Q8WUD4 166 aaPredicted RBP27.79■■■□□ 2.04
PXN-217ENST00000550795 SEPT1Q8WYJ6 367 aa27.79■■■□□ 2.04
PXN-217ENST00000550795 ATP6V0A1Q93050 837 aa27.79■■■□□ 2.04
PXN-217ENST00000550795 PRDM12Q9H4Q4 367 aa27.79■■■□□ 2.04
PXN-217ENST00000550795 SETD4Q9NVD3 440 aa27.79■■■□□ 2.04
PXN-217ENST00000550795 VPS54Q9P1Q0 977 aa27.79■■■□□ 2.04
PXN-217ENST00000550795 SLC4A7Q9Y6M7 1214 aa27.79■■■□□ 2.04
PXN-217ENST00000550795 REV3LO60673 3130 aa27.78■■■□□ 2.04
PXN-217ENST00000550795 MEIS1O00470 390 aa27.78■■■□□ 2.04
PXN-217ENST00000550795 TREHO43280 583 aa27.78■■■□□ 2.04
PXN-217ENST00000550795 ZNF618Q5T7W0 954 aa27.78■■■□□ 2.04
PXN-217ENST00000550795 TRAF7Q6Q0C0 670 aa27.78■■■□□ 2.04
PXN-217ENST00000550795 SERINC5Q86VE9 423 aa27.78■■■□□ 2.04
PXN-217ENST00000550795 REXO1Q8N1G1 1221 aaKnown RBP27.78■■■□□ 2.04
PXN-217ENST00000550795 RASGRP4Q8TDF6 673 aa27.78■■■□□ 2.04
PXN-217ENST00000550795 CRYGNQ8WXF5 182 aa27.78■■■□□ 2.04
PXN-217ENST00000550795 ZNF215Q9UL58 517 aaPredicted RBP27.78■■■□□ 2.04
PXN-217ENST00000550795 SEC24BO95487 1268 aa27.77■■■□□ 2.04
PXN-217ENST00000550795 MYOGP15173 224 aa27.77■■■□□ 2.04
PXN-217ENST00000550795 ZNF76P36508 570 aa27.77■■■□□ 2.04
PXN-217ENST00000550795 SSRP1Q08945 709 aaKnown RBP27.77■■■□□ 2.04
PXN-217ENST00000550795 ITGB3BPQ13352 177 aaPredicted RBP27.77■■■□□ 2.04
PXN-217ENST00000550795 ADGRE1Q14246 886 aa27.77■■■□□ 2.04
PXN-217ENST00000550795 AGO4Q9HCK5 861 aaKnown RBP27.77■■■□□ 2.04
PXN-217ENST00000550795 JPH1Q9HDC5 661 aaPredicted RBP27.77■■■□□ 2.04
PXN-217ENST00000550795 COL4A4P53420 1690 aaPredicted RBP27.77■■■□□ 2.04
PXN-217ENST00000550795 FAM86B1E9PN63 330 aa27.76■■■□□ 2.03
PXN-217ENST00000550795 NBNO60934 754 aa27.76■■■□□ 2.03
PXN-217ENST00000550795 FAM86B2P0C5J1 330 aa27.76■■■□□ 2.03
PXN-217ENST00000550795 GNA11P29992 359 aa27.76■■■□□ 2.03
PXN-217ENST00000550795 ANAPC15P60006 121 aa27.76■■■□□ 2.03
PXN-217ENST00000550795 UIMC1Q96RL1 719 aa27.76■■■□□ 2.03
PXN-217ENST00000550795 SLC9A2Q9UBY0 812 aa27.76■■■□□ 2.03
PXN-217ENST00000550795 KAT6AQ92794 2004 aa27.75■■■□□ 2.03
PXN-217ENST00000550795 CPLX1O14810 134 aa27.75■■■□□ 2.03
PXN-217ENST00000550795 CYP3A4P08684 503 aa27.75■■■□□ 2.03
PXN-217ENST00000550795 ACTN1P12814 892 aa27.75■■■□□ 2.03
PXN-217ENST00000550795 MARK3P27448 753 aa27.75■■■□□ 2.03
PXN-217ENST00000550795 MBTPS1Q14703 1052 aa27.75■■■□□ 2.03
PXN-217ENST00000550795 TRIM22Q8IYM9 498 aa27.75■■■□□ 2.03
PXN-217ENST00000550795 PCYT2Q99447 389 aa27.75■■■□□ 2.03
PXN-217ENST00000550795 MSRAQ9UJ68 235 aa27.75■■■□□ 2.03
PXN-217ENST00000550795 TRANK1O15050 2925 aa27.75■■■□□ 2.03
PXN-217ENST00000550795 NFASCO94856 1347 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 IGLV3-22A0A075B6J6 115 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 DTNBO60941 627 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 THPOP40225 353 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 ADAM17P78536 824 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 TCTN1Q2MV58 587 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 PLA2G4DQ86XP0 818 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 CCDC148Q8NFR7 591 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 LMBR1Q8WVP7 490 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 GLG1Q92896 1179 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 AIFM3Q96NN9 605 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 SDF4Q9BRK5 362 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 TPCN1Q9ULQ1 816 aa27.74■■■□□ 2.03
PXN-217ENST00000550795 CXCL10P02778 98 aa27.73■■■□□ 2.03
PXN-217ENST00000550795 ATP2A2P16615 1042 aaKnown RBP27.73■■■□□ 2.03
PXN-217ENST00000550795 ACTR2P61160 394 aa27.73■■■□□ 2.03
PXN-217ENST00000550795 SCRN1Q12765 414 aa27.73■■■□□ 2.03
PXN-217ENST00000550795 MCTP2Q6DN12 878 aa27.73■■■□□ 2.03
PXN-217ENST00000550795 NIPA1Q7RTP0 329 aa27.73■■■□□ 2.03
PXN-217ENST00000550795 PRDM6Q9NQX0 595 aa27.73■■■□□ 2.03
PXN-217ENST00000550795 SH3GLB2Q9NR46 395 aa27.73■■■□□ 2.03
PXN-217ENST00000550795 NLRP5P59047 1200 aa27.72■■■□□ 2.03
PXN-217ENST00000550795 BICD2Q8TD16 824 aa27.72■■■□□ 2.03
PXN-217ENST00000550795 SMARCAD1Q9H4L7 1026 aa27.72■■■□□ 2.03
PXN-217ENST00000550795 ERAP1Q9NZ08 941 aa27.72■■■□□ 2.03
PXN-217ENST00000550795 PCDHA11Q9Y5I1 949 aa27.72■■■□□ 2.03
PXN-217ENST00000550795 DDX39AO00148 427 aaKnown RBP27.71■■■□□ 2.03
PXN-217ENST00000550795 EDIL3O43854 480 aa27.71■■■□□ 2.03
PXN-217ENST00000550795 LGR5O75473 907 aa27.71■■■□□ 2.03
PXN-217ENST00000550795 DEXIO95424 95 aa27.71■■■□□ 2.03
PXN-217ENST00000550795 PARNO95453 639 aaKnown RBP27.71■■■□□ 2.03
PXN-217ENST00000550795 GNAT1P11488 350 aa27.71■■■□□ 2.03
PXN-217ENST00000550795 AK2P54819 239 aa27.71■■■□□ 2.03
PXN-217ENST00000550795 MICAL3Q7RTP6 2002 aa27.71■■■□□ 2.03
PXN-217ENST00000550795 IL17RAQ96F46 866 aa27.71■■■□□ 2.03
PXN-217ENST00000550795 SLC28A3Q9HAS3 691 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms