RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 STAM2O75886 525 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 PLEKHA8P1O95397 391 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 GHRP10912 638 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 KCNA2P16389 499 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 ITGB5P18084 799 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 ARHGAP4P98171 946 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 TRDNQ13061 729 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 LPIN1Q14693 890 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 GNPTABQ3T906 1256 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 MARCH8Q5T0T0 291 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 SRBD1Q8N5C6 995 aaKnown RBP13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 LINC01599Q8WXQ3 324 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 SENP7Q9BQF6 1050 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 SPZ1Q9BXG8 430 aa13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 IFIH1Q9BYX4 1025 aaKnown RBP13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
SMARCD1-208ENST00000550280 POTEB3A0JP26 581 aa13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 C5orf67F2Z3F1 127 aa13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 DLX2Q07687 328 aaPredicted RBP13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 POTEBQ6S5H4 581 aa13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 RPAINQ86UA6 219 aa13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 ZNF654Q8IZM8 581 aa13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 CRIPAKQ8N1N5 446 aa13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 NCOA7Q8NI08 942 aa13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 MAP4K1Q92918 833 aa13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 PABPC5Q96DU9 382 aaKnown RBP13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 SAMD11Q96NU1 681 aa13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 PCYT2Q99447 389 aa13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 MYO7AQ13402 2215 aa13.35□□□□□ -0.27
SMARCD1-208ENST00000550280 C5orf42Q9H799 3197 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 hCG_1642624A0A1W2PR95 340 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 MBLAC1A4D2B0 266 aaPredicted RBP13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 GRM6O15303 877 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 RXRAP19793 462 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 TCF7P36402 384 aaPredicted RBP13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 ZP2Q05996 745 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 TRAF1Q13077 416 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 CAMK1Q14012 370 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 CTC1Q2NKJ3 1217 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 TIGD5Q53EQ6 642 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 CATIPQ7Z7H3 387 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 RALYLQ86SE5 291 aaKnown RBP13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 RTN4RL1Q86UN2 441 aaPredicted RBP13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 APBB2Q92870 758 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 ZNF689Q96CS4 500 aaPredicted RBP13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 NSUN3Q9H649 340 aaKnown RBP13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 AGO3Q9H9G7 860 aaKnown RBP13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 HCN4Q9Y3Q4 1203 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 UBIAD1Q9Y5Z9 338 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 NRCAMQ92823 1304 aa13.34□□□□□ -0.27
SMARCD1-208ENST00000550280 ERICH2A1L162 156 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 C19orf67A6NJJ6 358 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 PRR33A8MZF0 331 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 ENPP3O14638 875 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 GNAT1P11488 350 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 MARK3P27448 753 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 HYAL1Q12794 435 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 UBE2SQ16763 222 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 PTPROQ16827 1216 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 FBXO47Q5MNV8 452 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 RAB11FIP4Q86YS3 637 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 SMARCC2Q8TAQ2 1214 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 CLP1Q92989 425 aaKnown RBP13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 GPRASP2Q96D09 838 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 IL17RAQ96F46 866 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 MAP3K14Q99558 947 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 ZNF215Q9UL58 517 aaPredicted RBP13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 RBM8AQ9Y5S9 174 aaKnown RBP13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 NLRC5Q86WI3 1866 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 ADGRA3Q8IWK6 1321 aa13.33□□□□□ -0.28
SMARCD1-208ENST00000550280 SH2B2O14492 632 aaPredicted RBP13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 LINC01565O15544 149 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 TBX10O75333 385 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 DDAH1O94760 285 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 SMARCA1P28370 1054 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 SSTR3P32745 418 aaPredicted RBP13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 CTNNB1P35222 781 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 BMPR1AP36894 532 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 PPFIA1Q13136 1202 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 GRIK4Q16099 956 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 XRRA1Q6P2D8 792 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 DNAJB3Q8WWF6 145 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 RRP36Q96EU6 259 aaKnown RBP13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 YTHDC1Q96MU7 727 aaKnown RBP13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 CLDND1Q9NY35 253 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 PKD2L1Q9P0L9 805 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 CDY2AQ9Y6F7 541 aa13.32□□□□□ -0.28
SMARCD1-208ENST00000550280 RALGAPA2Q2PPJ7 1873 aa13.31□□□□□ -0.28
SMARCD1-208ENST00000550280 PRC1O43663 620 aa13.31□□□□□ -0.28
SMARCD1-208ENST00000550280 DGKIO75912 1065 aa13.31□□□□□ -0.28
SMARCD1-208ENST00000550280 DNAJB1P25685 340 aa13.31□□□□□ -0.28
SMARCD1-208ENST00000550280 SART3Q15020 963 aaKnown RBP13.31□□□□□ -0.28
SMARCD1-208ENST00000550280 TYW1BQ6NUM6 668 aa13.31□□□□□ -0.28
SMARCD1-208ENST00000550280 NLRX1Q86UT6 975 aa13.31□□□□□ -0.28
SMARCD1-208ENST00000550280 FIBCD1Q8N539 461 aa13.31□□□□□ -0.28
SMARCD1-208ENST00000550280 SEPT1Q8WYJ6 367 aa13.31□□□□□ -0.28
SMARCD1-208ENST00000550280 LSG1Q9H089 658 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms