RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 INF2Q27J81 1249 aa29.43■■■□□ 2.3
CPSF6-205ENST00000550075 MFSD5Q6N075 450 aa29.43■■■□□ 2.3
CPSF6-205ENST00000550075 TRIM50Q86XT4 487 aa29.43■■■□□ 2.3
CPSF6-205ENST00000550075 TMEM199Q8N511 208 aa29.43■■■□□ 2.3
CPSF6-205ENST00000550075 PPP1R13LQ8WUF5 828 aa29.43■■■□□ 2.3
CPSF6-205ENST00000550075 C8orf76Q96K31 380 aa29.43■■■□□ 2.3
CPSF6-205ENST00000550075 NOC4LQ9BVI4 516 aaKnown RBP29.43■■■□□ 2.3
CPSF6-205ENST00000550075 AZI2Q9H6S1 392 aa29.43■■■□□ 2.3
CPSF6-205ENST00000550075 EMSYQ7Z589 1322 aa29.43■■■□□ 2.3
CPSF6-205ENST00000550075 GSTTP1A0A1W2PQM5 241 aa29.42■■■□□ 2.3
CPSF6-205ENST00000550075 ACTR2P61160 394 aa29.42■■■□□ 2.3
CPSF6-205ENST00000550075 KRT40Q6A162 431 aa29.42■■■□□ 2.3
CPSF6-205ENST00000550075 NEK8Q86SG6 692 aa29.42■■■□□ 2.3
CPSF6-205ENST00000550075 GLG1Q92896 1179 aa29.42■■■□□ 2.3
CPSF6-205ENST00000550075 SMARCAD1Q9H4L7 1026 aa29.42■■■□□ 2.3
CPSF6-205ENST00000550075 GCFC2P16383 781 aaKnown RBP29.41■■■□□ 2.3
CPSF6-205ENST00000550075 ITGB8P26012 769 aa29.41■■■□□ 2.3
CPSF6-205ENST00000550075 Q4G0T1 1027 aa29.41■■■□□ 2.3
CPSF6-205ENST00000550075 HABP4Q5JVS0 413 aaKnown RBP29.41■■■□□ 2.3
CPSF6-205ENST00000550075 GDF6Q6KF10 455 aaPredicted RBP29.41■■■□□ 2.3
CPSF6-205ENST00000550075 PIK3AP1Q6ZUJ8 805 aa29.41■■■□□ 2.3
CPSF6-205ENST00000550075 DIS3L2Q8IYB7 885 aaKnown RBP29.41■■■□□ 2.3
CPSF6-205ENST00000550075 OXER1Q8TDS5 423 aa29.41■■■□□ 2.3
CPSF6-205ENST00000550075 LENG9Q96B70 501 aa29.41■■■□□ 2.3
CPSF6-205ENST00000550075 TMX3Q96JJ7 454 aa29.41■■■□□ 2.3
CPSF6-205ENST00000550075 ERAP1Q9NZ08 941 aa29.41■■■□□ 2.3
CPSF6-205ENST00000550075 PCDH10Q9P2E7 1040 aa29.41■■■□□ 2.3
CPSF6-205ENST00000550075 CYP3A7-CYP3A51PA0A087WV96 503 aa29.4■■■□□ 2.3
CPSF6-205ENST00000550075 DDX39AO00148 427 aaKnown RBP29.4■■■□□ 2.3
CPSF6-205ENST00000550075 CYP2C9P11712 490 aa29.4■■■□□ 2.3
CPSF6-205ENST00000550075 CYP3A7P24462 503 aa29.4■■■□□ 2.3
CPSF6-205ENST00000550075 KRT76Q01546 638 aa29.4■■■□□ 2.3
CPSF6-205ENST00000550075 PPIGQ13427 754 aaKnown RBP eCLIP29.4■■■□□ 2.3
CPSF6-205ENST00000550075 BFSP2Q13515 415 aa29.4■■■□□ 2.3
CPSF6-205ENST00000550075 TDHQ8IZJ6 230 aa29.4■■■□□ 2.3
CPSF6-205ENST00000550075 TELO2Q9Y4R8 837 aa29.4■■■□□ 2.3
CPSF6-205ENST00000550075 C17orf102A2RUQ5 167 aa29.39■■■□□ 2.3
CPSF6-205ENST00000550075 TDP2O95551 362 aa29.39■■■□□ 2.3
CPSF6-205ENST00000550075 SMIM10L2AP0DMW4 78 aa29.39■■■□□ 2.3
CPSF6-205ENST00000550075 SMIM10L2BP0DMW5 78 aa29.39■■■□□ 2.3
CPSF6-205ENST00000550075 GNAT1P11488 350 aa29.39■■■□□ 2.3
CPSF6-205ENST00000550075 CYP2C18P33260 490 aa29.39■■■□□ 2.3
CPSF6-205ENST00000550075 LETM2Q2VYF4 491 aa29.39■■■□□ 2.3
CPSF6-205ENST00000550075 ZNF746Q6NUN9 644 aaPredicted RBP29.39■■■□□ 2.3
CPSF6-205ENST00000550075 CAGE1Q8TC20 777 aa29.39■■■□□ 2.3
CPSF6-205ENST00000550075 PITPNM1O00562 1244 aa29.38■■■□□ 2.29
CPSF6-205ENST00000550075 LGR5O75473 907 aa29.38■■■□□ 2.29
CPSF6-205ENST00000550075 CD2BP2O95400 341 aaKnown RBP29.38■■■□□ 2.29
CPSF6-205ENST00000550075 NR5A1Q13285 461 aa29.38■■■□□ 2.29
CPSF6-205ENST00000550075 SMAP1Q8IYB5 467 aaPredicted RBP29.38■■■□□ 2.29
CPSF6-205ENST00000550075 RETREG2Q8NC44 543 aa29.38■■■□□ 2.29
CPSF6-205ENST00000550075 TNPO1Q92973 898 aaKnown RBP29.38■■■□□ 2.29
CPSF6-205ENST00000550075 MBOAT7Q96N66 472 aa29.38■■■□□ 2.29
CPSF6-205ENST00000550075 RIT2Q99578 217 aa29.38■■■□□ 2.29
CPSF6-205ENST00000550075 DDX25Q9UHL0 483 aaKnown RBP29.38■■■□□ 2.29
CPSF6-205ENST00000550075 MSH4O15457 936 aa29.37■■■□□ 2.29
CPSF6-205ENST00000550075 DHX15O43143 795 aaKnown RBP29.37■■■□□ 2.29
CPSF6-205ENST00000550075 GAS7O60861 476 aa29.37■■■□□ 2.29
CPSF6-205ENST00000550075 FAM160B1Q5W0V3 765 aa29.37■■■□□ 2.29
CPSF6-205ENST00000550075 MIS18BP1Q6P0N0 1132 aa29.37■■■□□ 2.29
CPSF6-205ENST00000550075 TEKT3Q9BXF9 490 aa29.37■■■□□ 2.29
CPSF6-205ENST00000550075 TANC1Q9C0D5 1861 aa29.37■■■□□ 2.29
CPSF6-205ENST00000550075 KAT6AQ92794 2004 aa29.37■■■□□ 2.29
CPSF6-205ENST00000550075 BACH1O14867 736 aa29.36■■■□□ 2.29
CPSF6-205ENST00000550075 EDIL3O43854 480 aa29.36■■■□□ 2.29
CPSF6-205ENST00000550075 ATG7O95352 703 aa29.36■■■□□ 2.29
CPSF6-205ENST00000550075 CCNE2O96020 404 aa29.36■■■□□ 2.29
CPSF6-205ENST00000550075 SLC26A2P50443 739 aa29.36■■■□□ 2.29
CPSF6-205ENST00000550075 PTK7Q13308 1070 aa29.36■■■□□ 2.29
CPSF6-205ENST00000550075 LRCH2Q5VUJ6 765 aa29.36■■■□□ 2.29
CPSF6-205ENST00000550075 PPP4R3AQ6IN85 833 aa29.36■■■□□ 2.29
CPSF6-205ENST00000550075 SLC5A5Q92911 643 aa29.36■■■□□ 2.29
CPSF6-205ENST00000550075 TNFRSF25Q93038 417 aa29.36■■■□□ 2.29
CPSF6-205ENST00000550075 UIMC1Q96RL1 719 aa29.36■■■□□ 2.29
CPSF6-205ENST00000550075 BTBD18B2RXH4 712 aa29.35■■■□□ 2.29
CPSF6-205ENST00000550075 MARK3P27448 753 aa29.35■■■□□ 2.29
CPSF6-205ENST00000550075 HOXC8P31273 242 aa29.35■■■□□ 2.29
CPSF6-205ENST00000550075 GUCY1B3Q02153 619 aa29.35■■■□□ 2.29
CPSF6-205ENST00000550075 PLPPR4Q7Z2D5 763 aa29.35■■■□□ 2.29
CPSF6-205ENST00000550075 ATP6V0A1Q93050 837 aa29.35■■■□□ 2.29
CPSF6-205ENST00000550075 UMODL1Q5DID0 1318 aa29.35■■■□□ 2.29
CPSF6-205ENST00000550075 NRCAMQ92823 1304 aa29.35■■■□□ 2.29
CPSF6-205ENST00000550075 WDR64B1ANS9 1081 aa29.34■■■□□ 2.29
CPSF6-205ENST00000550075 CCNT1O60563 726 aaKnown RBP29.34■■■□□ 2.29
CPSF6-205ENST00000550075 STAT5BP51692 787 aa29.34■■■□□ 2.29
CPSF6-205ENST00000550075 CCL23P55773 120 aa29.34■■■□□ 2.29
CPSF6-205ENST00000550075 PPFIA1Q13136 1202 aa29.34■■■□□ 2.29
CPSF6-205ENST00000550075 GNL2Q13823 731 aaKnown RBP29.34■■■□□ 2.29
CPSF6-205ENST00000550075 ABHD15Q6UXT9 468 aa29.34■■■□□ 2.29
CPSF6-205ENST00000550075 FBXO18Q8NFZ0 1043 aa29.34■■■□□ 2.29
CPSF6-205ENST00000550075 AFAP1L1Q8TED9 768 aa29.34■■■□□ 2.29
CPSF6-205ENST00000550075 WNT8AQ9H1J5 351 aa29.34■■■□□ 2.29
CPSF6-205ENST00000550075 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.34■■■□□ 2.29
CPSF6-205ENST00000550075 RANBP2P49792 3224 aaKnown RBP29.34■■■□□ 2.29
CPSF6-205ENST00000550075 TRIP12Q14669 1992 aaPredicted RBP29.33■■■□□ 2.29
CPSF6-205ENST00000550075 PSAPP07602 524 aa29.33■■■□□ 2.29
CPSF6-205ENST00000550075 CSF2RAP15509 400 aa29.33■■■□□ 2.29
CPSF6-205ENST00000550075 RBL2Q08999 1139 aa29.33■■■□□ 2.29
CPSF6-205ENST00000550075 PSRC1Q6PGN9 363 aaPredicted RBP29.33■■■□□ 2.29
CPSF6-205ENST00000550075 CTAGE1Q96RT6 745 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms