RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 PLCD4Q9BRC7 762 aa15.53■□□□□ 0.08
CACNB3-209ENST00000548860 SPOPO43791 374 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 GAS7O60861 476 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 SEC24CP53992 1094 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 MESDQ14696 234 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 ZFPM1Q8IX07 1006 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 BCAS3Q9H6U6 928 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 MLXIPLQ9NP71 852 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 MED4Q9NPJ6 270 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 KBTBD4Q9NVX7 518 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 STIM2Q9P246 746 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.52■□□□□ 0.08
CACNB3-209ENST00000548860 ARHGEF35A5YM69 484 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 EIF3CLB5ME19 914 aaKnown RBP15.52■□□□□ 0.08
CACNB3-209ENST00000548860 PPEF1O14829 653 aaPredicted RBP15.52■□□□□ 0.08
CACNB3-209ENST00000548860 DHX9Q08211 1270 aaKnown RBP15.52■□□□□ 0.08
CACNB3-209ENST00000548860 APTXQ7Z2E3 356 aaKnown RBP15.52■□□□□ 0.08
CACNB3-209ENST00000548860 FAM178BQ8IXR5 827 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 EIF3CQ99613 913 aaKnown RBP15.52■□□□□ 0.08
CACNB3-209ENST00000548860 KCNK9Q9NPC2 374 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 USTQ9Y2C2 406 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 FRMD4BQ9Y2L6 1034 aa15.52■□□□□ 0.08
CACNB3-209ENST00000548860 H2AFZP0C0S5 128 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 SNX1Q13596 522 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 TRIP13Q15645 432 aaPredicted RBP15.52■□□□□ 0.07
CACNB3-209ENST00000548860 GALNT17Q6IS24 598 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 H2AFVQ71UI9 128 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 CCDC50Q8IVM0 306 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 CSRNP1Q96S65 589 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 ADAM33Q9BZ11 813 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 JMJD4Q9H9V9 463 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 AMACRQ9UHK6 382 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 PNMA6FA0A0J9YX94 578 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 PALM3A6NDB9 673 aaPredicted RBP15.52■□□□□ 0.07
CACNB3-209ENST00000548860 VIMP08670 466 aaKnown RBP15.52■□□□□ 0.07
CACNB3-209ENST00000548860 MYBP10242 640 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 RPL13P26373 211 aaKnown RBP15.52■□□□□ 0.07
CACNB3-209ENST00000548860 STAT1P42224 750 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 PPM1KQ8N3J5 372 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 TBC1D16Q8TBP0 767 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 CCDC114Q96M63 670 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 FAM184BQ9ULE4 1060 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 HPCAL4Q9UM19 191 aa15.52■□□□□ 0.07
CACNB3-209ENST00000548860 PLTPP55058 493 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 PPFIA1Q13136 1202 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 CCNI2Q6ZMN8 369 aaPredicted RBP15.51■□□□□ 0.07
CACNB3-209ENST00000548860 GLYCTKQ8IVS8 523 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 HOOK2Q96ED9 719 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 ZMYND12Q9H0C1 365 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 RABGAP1Q9Y3P9 1069 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 PDS5AQ29RF7 1337 aaKnown RBP15.51■□□□□ 0.07
CACNB3-209ENST00000548860 TUBBP07437 444 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 DLATP10515 647 aaKnown RBP15.51■□□□□ 0.07
CACNB3-209ENST00000548860 CASP4P49662 377 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 RCAN1P53805 252 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 CELF4Q9BZC1 486 aaKnown RBP15.51■□□□□ 0.07
CACNB3-209ENST00000548860 NT5C3AQ9H0P0 336 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 KLRC4O43908 158 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 ABCB5Q2M3G0 1257 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 TRAPPC11Q7Z392 1133 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 TBC1D22AQ8WUA7 517 aa15.51■□□□□ 0.07
CACNB3-209ENST00000548860 LAD1O00515 517 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 FLOT1O75955 427 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 KCNA1Q09470 495 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 SLC35G1Q2M3R5 365 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 ASPRV1Q53RT3 343 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 KCNB1Q14721 858 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 NBPF9Q3BBW0 867 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 SBK1Q52WX2 424 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 BANK1Q8NDB2 785 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 LRRC15Q8TF66 581 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 TNFRSF25Q93038 417 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 DDX4Q9NQI0 724 aaKnown RBP15.5■□□□□ 0.07
CACNB3-209ENST00000548860 TMOD4Q9NZQ9 345 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 ALAS1P13196 640 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 ARHGAP4P98171 946 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 LRCH2Q5VUJ6 765 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 SH3GLB2Q9NR46 395 aa15.5■□□□□ 0.07
CACNB3-209ENST00000548860 A0A1W2PQC6 194 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 GCOM1H8Y6P7 765 aaPredicted RBP15.49■□□□□ 0.07
CACNB3-209ENST00000548860 ZBTB5O15062 677 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 MYZAPP0CAP1 466 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 GBP6Q6ZN66 633 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 OTUD6AQ7L8S5 288 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 ANKRD42Q8N9B4 389 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 SPATA20Q8TB22 786 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 THOC1Q96FV9 657 aaKnown RBP15.49■□□□□ 0.07
CACNB3-209ENST00000548860 MTA3Q9BTC8 594 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 NOVA2Q9UNW9 492 aaKnown RBP15.49■□□□□ 0.07
CACNB3-209ENST00000548860 ITIH6Q6UXX5 1313 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 F5H6K3 240 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 MAP2K1Q02750 393 aaPredicted RBP15.49■□□□□ 0.07
CACNB3-209ENST00000548860 KLRC3Q07444 240 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 PPP1R7Q15435 360 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 FAM186BQ8IYM0 893 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 OGFOD1Q8N543 542 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 PNMA5Q96PV4 448 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 AMNQ9BXJ7 453 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 CUEDC2Q9H467 287 aa15.49■□□□□ 0.07
CACNB3-209ENST00000548860 STK17AQ9UEE5 414 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms