RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 GHRP10912 638 aa19■□□□□ 0.63
SSH1-208ENST00000548522 COL9A3Q14050 684 aaPredicted RBP19■□□□□ 0.63
SSH1-208ENST00000548522 EP400NLQ6ZTU2 488 aa19■□□□□ 0.63
SSH1-208ENST00000548522 RALYLQ86SE5 291 aaKnown RBP19■□□□□ 0.63
SSH1-208ENST00000548522 SAMD11Q96NU1 681 aa19■□□□□ 0.63
SSH1-208ENST00000548522 U3KPZ7 1027 aaPredicted RBP19■□□□□ 0.63
SSH1-208ENST00000548522 ERICH2A1L162 156 aa18.99■□□□□ 0.63
SSH1-208ENST00000548522 MEIS2O14770 477 aa18.99■□□□□ 0.63
SSH1-208ENST00000548522 STAM2O75886 525 aa18.99■□□□□ 0.63
SSH1-208ENST00000548522 TRAF1Q13077 416 aa18.99■□□□□ 0.63
SSH1-208ENST00000548522 COL19A1Q14993 1142 aa18.99■□□□□ 0.63
SSH1-208ENST00000548522 FAM26DQ5JW98 314 aa18.99■□□□□ 0.63
SSH1-208ENST00000548522 ZBTB10Q96DT7 871 aa18.99■□□□□ 0.63
SSH1-208ENST00000548522 ZNF215Q9UL58 517 aaPredicted RBP18.99■□□□□ 0.63
SSH1-208ENST00000548522 ARIH1Q9Y4X5 557 aaPredicted RBP18.99■□□□□ 0.63
SSH1-208ENST00000548522 TRIOO75962 3097 aa18.99■□□□□ 0.63
SSH1-208ENST00000548522 MYO7AQ13402 2215 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 ATP9AO75110 1047 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 GNAT1P11488 350 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 CHMLP26374 656 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 MARK3P27448 753 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 CTNNB1P35222 781 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 PCNX4Q63HM2 1172 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 CATIPQ7Z7H3 387 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 MB21D2Q8IYB1 491 aaPredicted RBP18.98■□□□□ 0.63
SSH1-208ENST00000548522 SMARCC2Q8TAQ2 1214 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 IGDCC4Q8TDY8 1250 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 APBB2Q92870 758 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 PABPC5Q96DU9 382 aaKnown RBP18.98■□□□□ 0.63
SSH1-208ENST00000548522 NSUN3Q9H649 340 aaKnown RBP18.98■□□□□ 0.63
SSH1-208ENST00000548522 RC3H2Q9HBD1 1191 aaKnown RBP18.98■□□□□ 0.63
SSH1-208ENST00000548522 PKD2L1Q9P0L9 805 aa18.98■□□□□ 0.63
SSH1-208ENST00000548522 GRM6O15303 877 aa18.97■□□□□ 0.63
SSH1-208ENST00000548522 PLEKHA8P1O95397 391 aa18.97■□□□□ 0.63
SSH1-208ENST00000548522 TCF7P36402 384 aaPredicted RBP18.97■□□□□ 0.63
SSH1-208ENST00000548522 MGAT3Q09327 533 aa18.97■□□□□ 0.63
SSH1-208ENST00000548522 LPIN1Q14693 890 aa18.97■□□□□ 0.63
SSH1-208ENST00000548522 CMTR1Q8N1G2 835 aaKnown RBP18.97■□□□□ 0.63
SSH1-208ENST00000548522 NCOA7Q8NI08 942 aa18.97■□□□□ 0.63
SSH1-208ENST00000548522 IL17RAQ96F46 866 aa18.97■□□□□ 0.63
SSH1-208ENST00000548522 LY9Q9HBG7 655 aa18.97■□□□□ 0.63
SSH1-208ENST00000548522 CLDND1Q9NY35 253 aa18.97■□□□□ 0.63
SSH1-208ENST00000548522 ADGRA3Q8IWK6 1321 aa18.97■□□□□ 0.63
SSH1-208ENST00000548522 ATG2AQ2TAZ0 1938 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 PRR33A8MZF0 331 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 KCNA2P16389 499 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 RXRAP19793 462 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 LTBRP36941 435 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 ZP2Q05996 745 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 DLX2Q07687 328 aaPredicted RBP18.96■□□□□ 0.63
SSH1-208ENST00000548522 PPFIA1Q13136 1202 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 SART3Q15020 963 aaKnown RBP18.96■□□□□ 0.63
SSH1-208ENST00000548522 CLUL1Q15846 466 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 RPAINQ86UA6 219 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 ZNF654Q8IZM8 581 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 FIBCD1Q8N539 461 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 LINC01599Q8WXQ3 324 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 SENP7Q9BQF6 1050 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 SPZ1Q9BXG8 430 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 EHMT1Q9H9B1 1298 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 NRCAMQ92823 1304 aa18.96■□□□□ 0.63
SSH1-208ENST00000548522 NLRC5Q86WI3 1866 aa18.95■□□□□ 0.62
SSH1-208ENST00000548522 hCG_1642624A0A1W2PR95 340 aa18.95■□□□□ 0.62
SSH1-208ENST00000548522 PIK3CDO00329 1044 aa18.95■□□□□ 0.62
SSH1-208ENST00000548522 ITGB5P18084 799 aa18.95■□□□□ 0.62
SSH1-208ENST00000548522 GTF2F1P35269 517 aaKnown RBP eCLIP18.95■□□□□ 0.62
SSH1-208ENST00000548522 GRIK4Q16099 956 aa18.95■□□□□ 0.62
SSH1-208ENST00000548522 UBE2SQ16763 222 aa18.95■□□□□ 0.62
SSH1-208ENST00000548522 MARCH8Q5T0T0 291 aa18.95■□□□□ 0.62
SSH1-208ENST00000548522 RAB11FIP4Q86YS3 637 aa18.95■□□□□ 0.62
SSH1-208ENST00000548522 RRP36Q96EU6 259 aaKnown RBP18.95■□□□□ 0.62
SSH1-208ENST00000548522 UIMC1Q96RL1 719 aa18.95■□□□□ 0.62
SSH1-208ENST00000548522 GSTTP1A0A1W2PQM5 241 aa18.94■□□□□ 0.62
SSH1-208ENST00000548522 POTEB3A0JP26 581 aa18.94■□□□□ 0.62
SSH1-208ENST00000548522 SGSM2O43147 1006 aa18.94■□□□□ 0.62
SSH1-208ENST00000548522 HYAL1Q12794 435 aa18.94■□□□□ 0.62
SSH1-208ENST00000548522 PUS10Q3MIT2 529 aaKnown RBP18.94■□□□□ 0.62
SSH1-208ENST00000548522 POTEBQ6S5H4 581 aa18.94■□□□□ 0.62
SSH1-208ENST00000548522 NLRX1Q86UT6 975 aa18.94■□□□□ 0.62
SSH1-208ENST00000548522 SRBD1Q8N5C6 995 aaKnown RBP18.94■□□□□ 0.62
SSH1-208ENST00000548522 DNAJB3Q8WWF6 145 aa18.94■□□□□ 0.62
SSH1-208ENST00000548522 CUL5Q93034 780 aa18.94■□□□□ 0.62
SSH1-208ENST00000548522 TUBE1Q9UJT0 475 aa18.94■□□□□ 0.62
SSH1-208ENST00000548522 RALGAPA2Q2PPJ7 1873 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 C5orf67F2Z3F1 127 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 LINC01565O15544 149 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 DCXO43602 365 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 TBX10O75333 385 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 DDAH1O94760 285 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 BMPR1AP36894 532 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 IGBP1P78318 339 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 FBXO47Q5MNV8 452 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 TAF2Q6P1X5 1199 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 XRRA1Q6P2D8 792 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 CTCFLQ8NI51 663 aaPredicted RBP18.93■□□□□ 0.62
SSH1-208ENST00000548522 RUFY2Q8WXA3 655 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 GPRASP2Q96D09 838 aa18.93■□□□□ 0.62
SSH1-208ENST00000548522 AGO3Q9H9G7 860 aaKnown RBP18.93■□□□□ 0.62
SSH1-208ENST00000548522 SEC63Q9UGP8 760 aaKnown RBP18.93■□□□□ 0.62
SSH1-208ENST00000548522 RBM8AQ9Y5S9 174 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms