RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 BMPR1AP36894 532 aa15.68■□□□□ 0.1
CCDC59-202ENST00000547758 SP2Q02086 613 aa15.68■□□□□ 0.1
CCDC59-202ENST00000547758 BMP8AQ7Z5Y6 402 aa15.68■□□□□ 0.1
CCDC59-202ENST00000547758 RNPEPQ9H4A4 650 aa15.68■□□□□ 0.1
CCDC59-202ENST00000547758 RNF41Q9H4P4 317 aaPredicted RBP15.68■□□□□ 0.1
CCDC59-202ENST00000547758 CD207Q9UJ71 328 aa15.68■□□□□ 0.1
CCDC59-202ENST00000547758 MYO15AQ9UKN7 3530 aa15.68■□□□□ 0.1
CCDC59-202ENST00000547758 ADGRA3Q8IWK6 1321 aa15.68■□□□□ 0.1
CCDC59-202ENST00000547758 OPLAHO14841 1288 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 ST18O60284 1047 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 LGALS2P05162 132 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 TGFB3P10600 412 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 GTF2F1P35269 517 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCDC59-202ENST00000547758 GHRHRQ02643 423 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 PGM5Q15124 567 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 ZNF589Q86UQ0 364 aaPredicted RBP15.67■□□□□ 0.1
CCDC59-202ENST00000547758 PRRX2Q99811 253 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 IGFLR1Q9H665 355 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 KAT14Q9H8E8 782 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 JMJD4Q9H9V9 463 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 MLXIPQ9HAP2 919 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 VAT1LQ9HCJ6 419 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 SPTBN4Q9H254 2564 aa15.67■□□□□ 0.1
CCDC59-202ENST00000547758 PLXNA4Q9HCM2 1894 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 TMEM221A6NGB7 291 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 M0R296 226 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 LINC01565O15544 149 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 CSPG5O95196 566 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 MMP1P03956 469 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 GNAT1P11488 350 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 PKN1Q16512 942 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 CCDC178Q5BJE1 867 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 TRIM67Q6ZTA4 783 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 STOX1Q6ZVD7 989 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 VSIG10LQ86VR7 867 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 IQCA1Q86XH1 822 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 IFNLR1Q8IU57 520 aaPredicted RBP15.66■□□□□ 0.1
CCDC59-202ENST00000547758 IL31RAQ8NI17 732 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 GPKOWQ92917 476 aaPredicted RBP eCLIP15.66■□□□□ 0.1
CCDC59-202ENST00000547758 CLP1Q92989 425 aaKnown RBP15.66■□□□□ 0.1
CCDC59-202ENST00000547758 PBXIP1Q96AQ6 731 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 AMNQ9BXJ7 453 aa15.66■□□□□ 0.1
CCDC59-202ENST00000547758 RC3H2Q9HBD1 1191 aaKnown RBP15.66■□□□□ 0.1
CCDC59-202ENST00000547758 ZFHX2Q9C0A1 2572 aaPredicted RBP15.65■□□□□ 0.1
CCDC59-202ENST00000547758 PARP1P09874 1014 aaKnown RBP15.65■□□□□ 0.1
CCDC59-202ENST00000547758 NDUFV1P49821 464 aa15.65■□□□□ 0.1
CCDC59-202ENST00000547758 TCF15Q12870 199 aa15.65■□□□□ 0.1
CCDC59-202ENST00000547758 FAM26DQ5JW98 314 aa15.65■□□□□ 0.1
CCDC59-202ENST00000547758 SUGP1Q8IWZ8 645 aaKnown RBP15.65■□□□□ 0.1
CCDC59-202ENST00000547758 SETD4Q9NVD3 440 aa15.65■□□□□ 0.1
CCDC59-202ENST00000547758 MAP3K20Q9NYL2 800 aaKnown RBP15.65■□□□□ 0.1
CCDC59-202ENST00000547758 NOP56O00567 594 aaKnown RBP15.64■□□□□ 0.09
CCDC59-202ENST00000547758 KDM4AO75164 1064 aa15.64■□□□□ 0.09
CCDC59-202ENST00000547758 EYA4O95677 639 aa15.64■□□□□ 0.09
CCDC59-202ENST00000547758 PTPRZ1P23471 2315 aaPredicted RBP15.64■□□□□ 0.09
CCDC59-202ENST00000547758 CCND2P30279 289 aa15.64■□□□□ 0.09
CCDC59-202ENST00000547758 HOXA13P31271 388 aaPredicted RBP15.64■□□□□ 0.09
CCDC59-202ENST00000547758 PSEN1P49768 467 aa15.64■□□□□ 0.09
CCDC59-202ENST00000547758 NT5C2P49902 561 aa15.64■□□□□ 0.09
CCDC59-202ENST00000547758 PLXNA3P51805 1871 aa15.64■□□□□ 0.09
CCDC59-202ENST00000547758 NMIQ13287 307 aaPredicted RBP15.64■□□□□ 0.09
CCDC59-202ENST00000547758 ADAM15Q13444 863 aa15.64■□□□□ 0.09
CCDC59-202ENST00000547758 ZFP91Q96JP5 570 aaPredicted RBP15.64■□□□□ 0.09
CCDC59-202ENST00000547758 MSLNLQ96KJ4 702 aa15.64■□□□□ 0.09
CCDC59-202ENST00000547758 PLVAPQ9BX97 442 aa15.64■□□□□ 0.09
CCDC59-202ENST00000547758 USP26Q9BXU7 913 aa15.64■□□□□ 0.09
CCDC59-202ENST00000547758 TRIM6-TRIM34B2RNG4 842 aa15.63■□□□□ 0.09
CCDC59-202ENST00000547758 ZXDAP98168 799 aa15.63■□□□□ 0.09
CCDC59-202ENST00000547758 ARHGAP4P98171 946 aa15.63■□□□□ 0.09
CCDC59-202ENST00000547758 CAMK1Q14012 370 aa15.63■□□□□ 0.09
CCDC59-202ENST00000547758 BTG3Q14201 252 aaPredicted RBP15.63■□□□□ 0.09
CCDC59-202ENST00000547758 TICAM2Q86XR7 235 aa15.63■□□□□ 0.09
CCDC59-202ENST00000547758 SAMD3Q8N6K7 520 aa15.63■□□□□ 0.09
CCDC59-202ENST00000547758 PDCD7Q8N8D1 485 aaKnown RBP15.63■□□□□ 0.09
CCDC59-202ENST00000547758 ENAHQ8N8S7 591 aaPredicted RBP15.63■□□□□ 0.09
CCDC59-202ENST00000547758 SPOCK2Q92563 424 aa15.63■□□□□ 0.09
CCDC59-202ENST00000547758 PPP2R3CQ969Q6 453 aa15.63■□□□□ 0.09
CCDC59-202ENST00000547758 ZSCAN10Q96SZ4 725 aaPredicted RBP15.63■□□□□ 0.09
CCDC59-202ENST00000547758 BCAS3Q9H6U6 928 aa15.63■□□□□ 0.09
CCDC59-202ENST00000547758 ALG13Q9NP73 1137 aaKnown RBP15.63■□□□□ 0.09
CCDC59-202ENST00000547758 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.63■□□□□ 0.09
CCDC59-202ENST00000547758 PCDHB15Q9Y5E8 787 aa15.63■□□□□ 0.09
CCDC59-202ENST00000547758 DMDP11532 3685 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 LOC730098B7Z3J9 87 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 ZNF213O14771 459 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 PPP1R11O60927 126 aaPredicted RBP15.62■□□□□ 0.09
CCDC59-202ENST00000547758 CHRNA1P02708 482 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 GHRP10912 638 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 ADAM17P78536 824 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 METTL7BQ6UX53 244 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 TRIM50Q86XT4 487 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 FBXL6Q8N531 539 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 SMRP1Q8NCR6 262 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 LMBR1Q8WVP7 490 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 ZNF689Q96CS4 500 aaPredicted RBP15.62■□□□□ 0.09
CCDC59-202ENST00000547758 ZNF215Q9UL58 517 aaPredicted RBP15.62■□□□□ 0.09
CCDC59-202ENST00000547758 PLAGL2Q9UPG8 496 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 PCDHA1Q9Y5I3 950 aa15.62■□□□□ 0.09
CCDC59-202ENST00000547758 B4E1Z4 1266 aa15.61■□□□□ 0.09
CCDC59-202ENST00000547758 GFRA3O60609 400 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms