RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 NR1I3Q14994 352 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 PTPN21Q16825 1174 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 MORN1Q5T089 497 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 FCHSD1Q86WN1 690 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 MYRIPQ8NFW9 859 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 CRYGNQ8WXF5 182 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 RAVER2Q9HCJ3 691 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 DDX25Q9UHL0 483 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 USP27XA6NNY8 438 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 TNNT1P13805 278 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 GCFC2P16383 781 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 PLCG1P19174 1290 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 CDKAL1Q5VV42 579 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 NCAPG2Q86XI2 1143 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 CCAR2Q8N163 923 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 MAGEF1Q9HAY2 307 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 RWDD2AQ9UIY3 292 aa18.49■□□□□ 0.55
CHMP1A-204ENST00000547687 GCOM1H8Y6P7 765 aaPredicted RBP18.48■□□□□ 0.55
CHMP1A-204ENST00000547687 VWA5AO00534 786 aa18.48■□□□□ 0.55
CHMP1A-204ENST00000547687 POLR2MP0CAP2 368 aa18.48■□□□□ 0.55
CHMP1A-204ENST00000547687 KCNB1Q14721 858 aa18.48■□□□□ 0.55
CHMP1A-204ENST00000547687 IGSF22Q8N9C0 903 aa18.48■□□□□ 0.55
CHMP1A-204ENST00000547687 USP6NLQ92738 828 aa18.48■□□□□ 0.55
CHMP1A-204ENST00000547687 PLXNA1Q9UIW2 1896 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 A0A1B0GTH6 734 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 HMGCRP04035 888 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 SREBF1P36956 1147 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 PAK1Q13153 545 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 TBX2Q13207 712 aaPredicted RBP18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 SPECC1LQ69YQ0 1117 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 LRRC15Q8TF66 581 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 SOCS4Q8WXH5 440 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 NAP1L4Q99733 375 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 TRMT1Q9NXH9 659 aaKnown RBP18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 FLRT1Q9NZU1 646 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 IVNS1ABPQ9Y6Y0 642 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 ZBED4O75132 1171 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 ALAS1P13196 640 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 KCNJ6P48051 423 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 FXR2P51116 673 aaKnown RBP eCLIP18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 SEMA3FQ13275 785 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 KMT5BQ4FZB7 885 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 CCDC112Q8NEF3 446 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 NELFBQ8WX92 580 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 HAS1Q92839 578 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 CALML4Q96GE6 196 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 DEFB118Q96PH6 123 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 CTAGE1Q96RT6 745 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 ADAMTS5Q9UNA0 930 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 GDAQ9Y2T3 454 aa18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 CTDP1Q9Y5B0 961 aaPredicted RBP18.47■□□□□ 0.55
CHMP1A-204ENST00000547687 CYP3A7-CYP3A51PA0A087WV96 503 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 KLRC4O43908 158 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 COBLO75128 1261 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 CYP3A7P24462 503 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 RGS2P41220 211 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 PRCPP42785 496 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 MAP2K5Q13163 448 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 TMEM266Q2M3C6 531 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 APTXQ7Z2E3 356 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 TEX2Q8IWB9 1127 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 MB21D1Q8N884 522 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 NPLOC4Q8TAT6 608 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 GJA10Q969M2 543 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 MMTAG2Q9BU76 263 aaKnown RBP18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 TMX1Q9H3N1 280 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 LRWD1Q9UFC0 647 aa18.46■□□□□ 0.55
CHMP1A-204ENST00000547687 NFIBO00712 420 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 PRKAR2AP13861 404 aaKnown RBP18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 PTPN14Q15678 1187 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 E4F1Q66K89 784 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 U2AF1L4Q8WU68 220 aaKnown RBP18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 CLEC4DQ8WXI8 215 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 MBOAT7Q96N66 472 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 APBA2Q99767 749 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 HOMER2Q9NSB8 354 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 SLC15A5A6NIM6 579 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 DYNC1I1O14576 645 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 RHOBTB3O94955 611 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 GJB1P08034 283 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 FDX1P10109 184 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 ADORA2AP29274 412 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 GRB14Q14449 540 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 PDIA5Q14554 519 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 FILIP1LQ4L180 1135 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 MOXD1Q6UVY6 613 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 REPS2Q8NFH8 660 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 UIMC1Q96RL1 719 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 RAB34Q9BZG1 259 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 ZNF214Q9UL59 606 aaPredicted RBP18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 MAPK8IP1Q9UQF2 711 aa18.45■□□□□ 0.54
CHMP1A-204ENST00000547687 FAM86B1E9PN63 330 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 MARCH6O60337 910 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 FAM86B2P0C5J1 330 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 GJA8P48165 433 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 AMPD3Q01432 767 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 GOLGA8FQ08AF8 430 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 GOLGA8DPQ0D2H9 430 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 MUM1L1Q5H9M0 696 aa18.44■□□□□ 0.54
CHMP1A-204ENST00000547687 CEP135Q66GS9 1140 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms