RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 TEX2Q8IWB9 1127 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 TBC1D5Q92609 795 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 SCLYQ96I15 445 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 UHRF1Q96T88 793 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-226ENST00000547259 TRMT13Q9NUP7 481 aaKnown RBP13.74□□□□□ -0.21
HDAC7-226ENST00000547259 MAP3K20Q9NYL2 800 aaKnown RBP13.74□□□□□ -0.21
HDAC7-226ENST00000547259 MTMR6Q9Y217 621 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 YBX2Q9Y2T7 364 aaKnown RBP13.74□□□□□ -0.21
HDAC7-226ENST00000547259 CCDC194A0A1B0GVG4 234 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 BTBD18B2RXH4 712 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 BAIAP3O94812 1187 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 TXNP10599 105 aaKnown RBP13.73□□□□□ -0.21
HDAC7-226ENST00000547259 CYP2C9P11712 490 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 CLK2P49760 499 aaKnown RBP13.73□□□□□ -0.21
HDAC7-226ENST00000547259 NR5A1Q13285 461 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 AP3B2Q13367 1082 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 CCDC85BQ15834 202 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-226ENST00000547259 MCTP2Q6DN12 878 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 KRT25Q7Z3Z0 450 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 FERMT3Q86UX7 667 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 FCHSD1Q86WN1 690 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 CAGE1Q8TC20 777 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 SYTL5Q8TDW5 730 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-226ENST00000547259 ADAMTS19Q8TE59 1207 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 PGBD1Q96JS3 809 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 IWS1Q96ST2 819 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 ANO3Q9BYT9 981 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 FTOQ9C0B1 505 aaKnown RBP eCLIP13.73□□□□□ -0.21
HDAC7-226ENST00000547259 FOXP1Q9H334 677 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-226ENST00000547259 EHMT1Q9H9B1 1298 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 PCDHA6Q9UN73 950 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 COG5Q9UP83 839 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 PCDHA8Q9Y5H6 950 aa13.73□□□□□ -0.21
HDAC7-226ENST00000547259 IQCF3P0C7M6 154 aa13.72□□□□□ -0.21
HDAC7-226ENST00000547259 ZSCAN22P10073 491 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-226ENST00000547259 DDIT3P35638 169 aa13.72□□□□□ -0.21
HDAC7-226ENST00000547259 RABGGTBP53611 331 aa13.72□□□□□ -0.21
HDAC7-226ENST00000547259 NUCB2P80303 420 aa13.72□□□□□ -0.21
HDAC7-226ENST00000547259 PKP1Q13835 747 aa13.72□□□□□ -0.21
HDAC7-226ENST00000547259 FOXD4L5Q5VV16 416 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-226ENST00000547259 DEFB128Q7Z7B8 93 aa13.72□□□□□ -0.21
HDAC7-226ENST00000547259 NSUN6Q8TEA1 469 aaKnown RBP13.72□□□□□ -0.21
HDAC7-226ENST00000547259 FOXD4L4Q8WXT5 416 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-226ENST00000547259 PURBQ96QR8 312 aaKnown RBP13.72□□□□□ -0.21
HDAC7-226ENST00000547259 COL20A1Q9P218 1284 aa13.72□□□□□ -0.21
HDAC7-226ENST00000547259 CIZ1Q9ULV3 898 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-226ENST00000547259 SCN5AQ14524 2016 aa13.72□□□□□ -0.21
HDAC7-226ENST00000547259 KIAA1217Q5T5P2 1943 aa13.72□□□□□ -0.21
HDAC7-226ENST00000547259 M0R2N6 131 aa13.71□□□□□ -0.21
HDAC7-226ENST00000547259 F13A1P00488 732 aa13.71□□□□□ -0.21
HDAC7-226ENST00000547259 FOSP01100 380 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-226ENST00000547259 KCNJ6P48051 423 aa13.71□□□□□ -0.21
HDAC7-226ENST00000547259 NONOQ15233 471 aaKnown RBP eCLIP13.71□□□□□ -0.21
HDAC7-226ENST00000547259 STXBP2Q15833 593 aa13.71□□□□□ -0.21
HDAC7-226ENST00000547259 TMEM63BQ5T3F8 832 aa13.71□□□□□ -0.21
HDAC7-226ENST00000547259 PIK3AP1Q6ZUJ8 805 aa13.71□□□□□ -0.21
HDAC7-226ENST00000547259 SESTD1Q86VW0 696 aa13.71□□□□□ -0.21
HDAC7-226ENST00000547259 NOSTRINQ8IVI9 506 aa13.71□□□□□ -0.21
HDAC7-226ENST00000547259 AFAP1L1Q8TED9 768 aa13.71□□□□□ -0.21
HDAC7-226ENST00000547259 TAAR1Q96RJ0 339 aa13.71□□□□□ -0.21
HDAC7-226ENST00000547259 DDX49Q9Y6V7 483 aaKnown RBP13.71□□□□□ -0.21
HDAC7-226ENST00000547259 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.22
HDAC7-226ENST00000547259 TET1Q8NFU7 2136 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 TANC1Q9C0D5 1861 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 EFCAB14O75071 495 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 BRD1O95696 1058 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 GH1P01241 217 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 CA3P07451 260 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 COL9A1P20849 921 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 U2AF2P26368 475 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC7-226ENST00000547259 RESTQ13127 1097 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 SKIV2LQ15477 1246 aaKnown RBP13.7□□□□□ -0.22
HDAC7-226ENST00000547259 PTGISQ16647 500 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 ARHGEF16Q5VV41 709 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 BRAPQ7Z569 592 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 TNFRSF25Q93038 417 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 RMDN3Q96TC7 470 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 KATNAL1Q9BW62 490 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 C1QTNF1Q9BXJ1 281 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 CHMP5Q9NZZ3 219 aa13.7□□□□□ -0.22
HDAC7-226ENST00000547259 NOL7Q9UMY1 257 aaKnown RBP13.7□□□□□ -0.22
HDAC7-226ENST00000547259 BRWD1Q9NSI6 2320 aa13.69□□□□□ -0.22
HDAC7-226ENST00000547259 FAM205CA6NFA0 338 aa13.69□□□□□ -0.22
HDAC7-226ENST00000547259 EIF2AK2P19525 551 aaKnown RBP13.69□□□□□ -0.22
HDAC7-226ENST00000547259 PTGS1P23219 599 aa13.69□□□□□ -0.22
HDAC7-226ENST00000547259 DGKDQ16760 1214 aa13.69□□□□□ -0.22
HDAC7-226ENST00000547259 INF2Q27J81 1249 aa13.69□□□□□ -0.22
HDAC7-226ENST00000547259 EARS2Q5JPH6 523 aaKnown RBP13.69□□□□□ -0.22
HDAC7-226ENST00000547259 CCDC62Q6P9F0 684 aa13.69□□□□□ -0.22
HDAC7-226ENST00000547259 KCNV1Q6PIU1 500 aa13.69□□□□□ -0.22
HDAC7-226ENST00000547259 HERC6Q8IVU3 1022 aa13.69□□□□□ -0.22
HDAC7-226ENST00000547259 MICALL1Q8N3F8 863 aa13.69□□□□□ -0.22
HDAC7-226ENST00000547259 ZSCAN16Q9H4T2 348 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-226ENST00000547259 PXMP2Q9NR77 195 aa13.69□□□□□ -0.22
HDAC7-226ENST00000547259 LMCD1Q9NZU5 365 aa13.69□□□□□ -0.22
HDAC7-226ENST00000547259 FRMPD4Q14CM0 1322 aa13.68□□□□□ -0.22
HDAC7-226ENST00000547259 TLL1O43897 1013 aa13.68□□□□□ -0.22
HDAC7-226ENST00000547259 EIF3JO75822 258 aaKnown RBP13.68□□□□□ -0.22
HDAC7-226ENST00000547259 MYOGP15173 224 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms