RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 GSTTP1A0A1W2PQM5 241 aa21.45■■□□□ 1.02
CHERP-204ENST00000546538 GTPBP6O43824 516 aaPredicted RBP21.45■■□□□ 1.02
CHERP-204ENST00000546538 CALM1P0DP23 149 aa21.45■■□□□ 1.02
CHERP-204ENST00000546538 CALM2P0DP24 149 aa21.45■■□□□ 1.02
CHERP-204ENST00000546538 CALM3P0DP25 149 aa21.45■■□□□ 1.02
CHERP-204ENST00000546538 ERVK-21P61565 698 aa21.45■■□□□ 1.02
CHERP-204ENST00000546538 EXOSC10Q01780 885 aaKnown RBP21.45■■□□□ 1.02
CHERP-204ENST00000546538 ADCK5Q3MIX3 580 aa21.45■■□□□ 1.02
CHERP-204ENST00000546538 GPRASP2Q96D09 838 aa21.45■■□□□ 1.02
CHERP-204ENST00000546538 UHRF1Q96T88 793 aaPredicted RBP21.45■■□□□ 1.02
CHERP-204ENST00000546538 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.44■■□□□ 1.02
CHERP-204ENST00000546538 EFCAB14O75071 495 aa21.44■■□□□ 1.02
CHERP-204ENST00000546538 TCF7P36402 384 aaPredicted RBP21.44■■□□□ 1.02
CHERP-204ENST00000546538 HTRA4P83105 476 aaPredicted RBP21.44■■□□□ 1.02
CHERP-204ENST00000546538 WWC2Q6AWC2 1192 aa21.44■■□□□ 1.02
CHERP-204ENST00000546538 APOA5Q6Q788 366 aa21.44■■□□□ 1.02
CHERP-204ENST00000546538 RUFY4Q6ZNE9 571 aa21.44■■□□□ 1.02
CHERP-204ENST00000546538 PKD2L1Q9P0L9 805 aa21.44■■□□□ 1.02
CHERP-204ENST00000546538 SKIV2LQ15477 1246 aaKnown RBP21.43■■□□□ 1.02
CHERP-204ENST00000546538 FAM26DQ5JW98 314 aa21.43■■□□□ 1.02
CHERP-204ENST00000546538 HEATR3Q7Z4Q2 680 aa21.43■■□□□ 1.02
CHERP-204ENST00000546538 NLRX1Q86UT6 975 aa21.43■■□□□ 1.02
CHERP-204ENST00000546538 CYP2W1Q8TAV3 490 aa21.43■■□□□ 1.02
CHERP-204ENST00000546538 SP7Q8TDD2 431 aaPredicted RBP21.43■■□□□ 1.02
CHERP-204ENST00000546538 C17orf80Q9BSJ5 609 aa21.43■■□□□ 1.02
CHERP-204ENST00000546538 FAM217BQ9NTX9 383 aaPredicted RBP21.43■■□□□ 1.02
CHERP-204ENST00000546538 PCDHA6Q9UN73 950 aa21.43■■□□□ 1.02
CHERP-204ENST00000546538 PCDHA8Q9Y5H6 950 aa21.43■■□□□ 1.02
CHERP-204ENST00000546538 CAND2O75155 1236 aa21.42■■□□□ 1.02
CHERP-204ENST00000546538 CHRNA1P02708 482 aa21.42■■□□□ 1.02
CHERP-204ENST00000546538 ARHGAP4P98171 946 aa21.42■■□□□ 1.02
CHERP-204ENST00000546538 MARCH8Q5T0T0 291 aa21.42■■□□□ 1.02
CHERP-204ENST00000546538 MYOCDQ8IZQ8 938 aa21.42■■□□□ 1.02
CHERP-204ENST00000546538 ZBTB10Q96DT7 871 aa21.42■■□□□ 1.02
CHERP-204ENST00000546538 TGS1Q96RS0 853 aaKnown RBP21.42■■□□□ 1.02
CHERP-204ENST00000546538 PCYT2Q99447 389 aa21.42■■□□□ 1.02
CHERP-204ENST00000546538 PGBD1Q96JS3 809 aa21.41■■□□□ 1.02
CHERP-204ENST00000546538 NEK1Q96PY6 1258 aa21.41■■□□□ 1.02
CHERP-204ENST00000546538 JADE2Q9NQC1 790 aa21.41■■□□□ 1.02
CHERP-204ENST00000546538 ZNF215Q9UL58 517 aaPredicted RBP21.41■■□□□ 1.02
CHERP-204ENST00000546538 MARK3P27448 753 aa21.4■■□□□ 1.02
CHERP-204ENST00000546538 MGAT3Q09327 533 aa21.4■■□□□ 1.02
CHERP-204ENST00000546538 MTMR1Q13613 665 aa21.4■■□□□ 1.02
CHERP-204ENST00000546538 TSGA10IPQ3SY00 556 aa21.4■■□□□ 1.02
CHERP-204ENST00000546538 TSPYL2Q9H2G4 693 aaPredicted RBP21.4■■□□□ 1.02
CHERP-204ENST00000546538 KAT6AQ92794 2004 aa21.4■■□□□ 1.02
CHERP-204ENST00000546538 NRCAMQ92823 1304 aa21.4■■□□□ 1.02
CHERP-204ENST00000546538 ADAMTS3O15072 1205 aa21.39■■□□□ 1.02
CHERP-204ENST00000546538 AMHP03971 560 aa21.39■■□□□ 1.02
CHERP-204ENST00000546538 CDC27P30260 824 aa21.39■■□□□ 1.02
CHERP-204ENST00000546538 GIMAP8Q8ND71 665 aaPredicted RBP21.39■■□□□ 1.02
CHERP-204ENST00000546538 SEPT8Q92599 483 aa21.39■■□□□ 1.02
CHERP-204ENST00000546538 TOP1MTQ969P6 601 aa21.39■■□□□ 1.02
CHERP-204ENST00000546538 INSL6Q9Y581 213 aa21.39■■□□□ 1.02
CHERP-204ENST00000546538 COL4A6Q14031 1691 aa21.39■■□□□ 1.02
CHERP-204ENST00000546538 MBLAC1A4D2B0 266 aaPredicted RBP21.38■■□□□ 1.01
CHERP-204ENST00000546538 SPDYE3A6NKU9 549 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 STXBP3O00186 592 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 GNAT1P11488 350 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 CENPQQ7L2Z9 268 aaPredicted RBP21.38■■□□□ 1.01
CHERP-204ENST00000546538 DHX32Q7L7V1 743 aaKnown RBP21.38■■□□□ 1.01
CHERP-204ENST00000546538 RPAINQ86UA6 219 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 SEPT1Q8WYJ6 367 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 CDHR1Q96JP9 859 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 EHMT1Q9H9B1 1298 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 KCNH7Q9NS40 1196 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 LMCD1Q9NZU5 365 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 ARP10275 920 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 CPA1P15085 419 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 PPFIA1Q13136 1202 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 GRIK4Q16099 956 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 RTN1Q16799 776 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 RIC8AQ9NPQ8 531 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 TMEM260Q9NX78 707 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 COG5Q9UP83 839 aa21.38■■□□□ 1.01
CHERP-204ENST00000546538 V9GY48 417 aaPredicted RBP21.38■■□□□ 1.01
CHERP-204ENST00000546538 LINC00271P0C7V0 271 aa21.37■■□□□ 1.01
CHERP-204ENST00000546538 GHRP10912 638 aa21.37■■□□□ 1.01
CHERP-204ENST00000546538 ITGB3BPQ13352 177 aaPredicted RBP21.37■■□□□ 1.01
CHERP-204ENST00000546538 LPIN1Q14693 890 aa21.37■■□□□ 1.01
CHERP-204ENST00000546538 RNF20Q5VTR2 975 aa21.37■■□□□ 1.01
CHERP-204ENST00000546538 HLA-CQ95604 372 aa21.37■■□□□ 1.01
CHERP-204ENST00000546538 MXRA8Q9BRK3 442 aa21.37■■□□□ 1.01
CHERP-204ENST00000546538 IFIH1Q9BYX4 1025 aaKnown RBP21.37■■□□□ 1.01
CHERP-204ENST00000546538 RBM28Q9NW13 759 aaKnown RBP21.37■■□□□ 1.01
CHERP-204ENST00000546538 ERAP1Q9NZ08 941 aa21.37■■□□□ 1.01
CHERP-204ENST00000546538 MYO7AQ13402 2215 aa21.36■■□□□ 1.01
CHERP-204ENST00000546538 ZBTB43O43298 467 aa21.36■■□□□ 1.01
CHERP-204ENST00000546538 UPP2O95045 317 aa21.36■■□□□ 1.01
CHERP-204ENST00000546538 CLK2P49760 499 aaKnown RBP21.36■■□□□ 1.01
CHERP-204ENST00000546538 NAPAP54920 295 aa21.36■■□□□ 1.01
CHERP-204ENST00000546538 DNAJB3Q8WWF6 145 aa21.36■■□□□ 1.01
CHERP-204ENST00000546538 JPH1Q9HDC5 661 aaPredicted RBP21.36■■□□□ 1.01
CHERP-204ENST00000546538 TUBE1Q9UJT0 475 aa21.36■■□□□ 1.01
CHERP-204ENST00000546538 NLRC5Q86WI3 1866 aa21.36■■□□□ 1.01
CHERP-204ENST00000546538 ATG2AQ2TAZ0 1938 aa21.35■■□□□ 1.01
CHERP-204ENST00000546538 KLF18A0A0U1RQI7 1052 aa21.35■■□□□ 1.01
CHERP-204ENST00000546538 AAK1Q2M2I8 961 aa21.35■■□□□ 1.01
CHERP-204ENST00000546538 EPC2Q52LR7 807 aa21.35■■□□□ 1.01
CHERP-204ENST00000546538 TAF2Q6P1X5 1199 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms