RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ORC2Q13416 577 aaPredicted RBP23.15■■□□□ 1.3
HMGA2-211ENST00000545998 LRRC26Q2I0M4 334 aa23.15■■□□□ 1.3
HMGA2-211ENST00000545998 BRAPQ7Z569 592 aa23.15■■□□□ 1.3
HMGA2-211ENST00000545998 VTI1AQ96AJ9 217 aa23.15■■□□□ 1.3
HMGA2-211ENST00000545998 HTATIP2Q9BUP3 242 aa23.15■■□□□ 1.3
HMGA2-211ENST00000545998 KRT76Q01546 638 aa23.14■■□□□ 1.3
HMGA2-211ENST00000545998 NBR1Q14596 966 aa23.14■■□□□ 1.3
HMGA2-211ENST00000545998 ZNF174Q15697 407 aa23.14■■□□□ 1.3
HMGA2-211ENST00000545998 FERMT3Q86UX7 667 aa23.14■■□□□ 1.3
HMGA2-211ENST00000545998 SLC43A3Q8NBI5 491 aa23.14■■□□□ 1.3
HMGA2-211ENST00000545998 TEKT3Q9BXF9 490 aa23.14■■□□□ 1.3
HMGA2-211ENST00000545998 RESTQ13127 1097 aa23.14■■□□□ 1.29
HMGA2-211ENST00000545998 ITGA7Q13683 1181 aa23.14■■□□□ 1.29
HMGA2-211ENST00000545998 CALCRLQ16602 461 aa23.14■■□□□ 1.29
HMGA2-211ENST00000545998 RILPL1Q5EBL4 403 aa23.14■■□□□ 1.29
HMGA2-211ENST00000545998 B3GNT9Q6UX72 402 aa23.14■■□□□ 1.29
HMGA2-211ENST00000545998 ABHD15Q6UXT9 468 aa23.14■■□□□ 1.29
HMGA2-211ENST00000545998 MTMR9Q96QG7 549 aa23.14■■□□□ 1.29
HMGA2-211ENST00000545998 MYH9P35579 1960 aaKnown RBP23.14■■□□□ 1.29
HMGA2-211ENST00000545998 ARVCFO00192 962 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 HAS3O00219 553 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 LGR5O75473 907 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 PDIA4P13667 645 aaKnown RBP23.13■■□□□ 1.29
HMGA2-211ENST00000545998 CDK7P50613 346 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 NBPF20Q3BBV1 942 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 UTP14CQ5TAP6 766 aaKnown RBP23.13■■□□□ 1.29
HMGA2-211ENST00000545998 TRIM50Q86XT4 487 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 SMAP1Q8IYB5 467 aaPredicted RBP23.13■■□□□ 1.29
HMGA2-211ENST00000545998 SLFN12Q8IYM2 578 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 PCYT2Q99447 389 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 KATNAL1Q9BW62 490 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 TMEM60Q9H2L4 133 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 UNC45AQ9H3U1 944 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 TCEAL9Q9UHQ7 104 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 PCDHB6Q9Y5E3 794 aa23.13■■□□□ 1.29
HMGA2-211ENST00000545998 CEP290O15078 2479 aa23.12■■□□□ 1.29
HMGA2-211ENST00000545998 IGKV6D-21A0A0A0MT36 114 aa23.12■■□□□ 1.29
HMGA2-211ENST00000545998 BAG4O95429 457 aaKnown RBP23.12■■□□□ 1.29
HMGA2-211ENST00000545998 SUPT20HL2P0C7V6 817 aa23.12■■□□□ 1.29
HMGA2-211ENST00000545998 PSEN2P49810 448 aa23.12■■□□□ 1.29
HMGA2-211ENST00000545998 EMSYQ7Z589 1322 aa23.12■■□□□ 1.29
HMGA2-211ENST00000545998 SEZ6LQ9BYH1 1024 aa23.12■■□□□ 1.29
HMGA2-211ENST00000545998 VAV3Q9UKW4 847 aa23.12■■□□□ 1.29
HMGA2-211ENST00000545998 H3BRB1 525 aa23.11■■□□□ 1.29
HMGA2-211ENST00000545998 MARCH6O60337 910 aa23.11■■□□□ 1.29
HMGA2-211ENST00000545998 RTP1P59025 263 aa23.11■■□□□ 1.29
HMGA2-211ENST00000545998 PPP2R5CQ13362 524 aa23.11■■□□□ 1.29
HMGA2-211ENST00000545998 MFSD10Q14728 455 aa23.11■■□□□ 1.29
HMGA2-211ENST00000545998 TRIM60Q495X7 471 aa23.11■■□□□ 1.29
HMGA2-211ENST00000545998 C4orf32Q8N8J7 132 aa23.11■■□□□ 1.29
HMGA2-211ENST00000545998 TUT1Q9H6E5 874 aaKnown RBP23.11■■□□□ 1.29
HMGA2-211ENST00000545998 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.11■■□□□ 1.29
HMGA2-211ENST00000545998 WDR64B1ANS9 1081 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 KIAA0753Q2KHM9 967 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 MIS18BP1Q6P0N0 1132 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 NFRKBQ6P4R8 1299 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 ZNF215Q9UL58 517 aaPredicted RBP23.1■■□□□ 1.29
HMGA2-211ENST00000545998 PCDHA10Q9Y5I2 948 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 KAT6AQ92794 2004 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 CHMP2AO43633 222 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 SFNP31947 248 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 JAK3P52333 1124 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 CHMP4BP1P59074 171 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 ANKRD33Q7Z3H0 272 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 CCDC60Q8IWA6 550 aaPredicted RBP23.1■■□□□ 1.29
HMGA2-211ENST00000545998 PPP1R13LQ8WUF5 828 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 SMARCAD1Q9H4L7 1026 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 ZSCAN16Q9H4T2 348 aaPredicted RBP23.1■■□□□ 1.29
HMGA2-211ENST00000545998 AZI2Q9H6S1 392 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 DISC1Q9NRI5 854 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 ATP11BQ9Y2G3 1177 aa23.1■■□□□ 1.29
HMGA2-211ENST00000545998 MYH15Q9Y2K3 1946 aa23.09■■□□□ 1.29
HMGA2-211ENST00000545998 MROH7Q68CQ1 1323 aa23.09■■□□□ 1.29
HMGA2-211ENST00000545998 MLLT1Q03111 559 aaPredicted RBP23.09■■□□□ 1.29
HMGA2-211ENST00000545998 SPIRE1Q08AE8 756 aa23.09■■□□□ 1.29
HMGA2-211ENST00000545998 PKP1Q13835 747 aa23.09■■□□□ 1.29
HMGA2-211ENST00000545998 PLPPR4Q7Z2D5 763 aa23.09■■□□□ 1.29
HMGA2-211ENST00000545998 RDM1Q8NG50 284 aa23.09■■□□□ 1.29
HMGA2-211ENST00000545998 AFAP1L1Q8TED9 768 aa23.09■■□□□ 1.29
HMGA2-211ENST00000545998 GLG1Q92896 1179 aa23.09■■□□□ 1.29
HMGA2-211ENST00000545998 ERAP1Q9NZ08 941 aa23.09■■□□□ 1.29
HMGA2-211ENST00000545998 SAMM50Q9Y512 469 aa23.09■■□□□ 1.29
HMGA2-211ENST00000545998 TRIP12Q14669 1992 aaPredicted RBP23.08■■□□□ 1.29
HMGA2-211ENST00000545998 PQBP1O60828 265 aaKnown RBP23.08■■□□□ 1.29
HMGA2-211ENST00000545998 PSAPP07602 524 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 OR52Z1P0C646 297 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 TXKP42681 527 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 STAT5BP51692 787 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 TLE2Q04725 743 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 PTGDRQ13258 359 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 SWSAP1Q6NVH7 229 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 MIER3Q7Z3K6 550 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 SESTD1Q86VW0 696 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 DPF3Q92784 378 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 TOX2Q96NM4 488 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 TTC12Q9H892 705 aaPredicted RBP23.08■■□□□ 1.29
HMGA2-211ENST00000545998 PCDHA12Q9UN75 941 aa23.08■■□□□ 1.29
HMGA2-211ENST00000545998 EML1O00423 815 aa23.07■■□□□ 1.28
HMGA2-211ENST00000545998 BACH1O14867 736 aa23.07■■□□□ 1.28
HMGA2-211ENST00000545998 ZSCAN22P10073 491 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms