RNA–Protein interactions for RNA: ENST00000544679.1

NDUFA9-209, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 2

Gene NDUFA9, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-209ENST00000544679 IER5Q5VY09 327 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 PDE12Q6L8Q7 609 aaKnown RBP10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 METTL7BQ6UX53 244 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 FAM43BQ6ZT52 329 aaPredicted RBP10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 STOX1Q6ZVD7 989 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 FCHSD1Q86WN1 690 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 SMRP1Q8NCR6 262 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 ANKS1AQ92625 1134 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 CUL5Q93034 780 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 ZKSCAN3Q9BRR0 538 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 MFSD1Q9H3U5 465 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 PUF60Q9UHX1 559 aaKnown RBP10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 RCAN3Q9UKA8 241 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 NR2E1Q9Y466 385 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 USP15Q9Y4E8 981 aaPredicted RBP10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 ZMYM6O95789 1325 aa10.31□□□□□ -0.76
NDUFA9-209ENST00000544679 CHD7Q9P2D1 2997 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 TET1Q8NFU7 2136 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 H0Y858 1186 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 FIBPO43427 364 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 DGKIO75912 1065 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 GTF2F1P35269 517 aaKnown RBP eCLIP10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 UBE3AQ05086 875 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 CBX2Q14781 532 aaPredicted RBP10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 PTPN21Q16825 1174 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 ODR4Q5SWX8 454 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 TSHZ1Q6ZSZ6 1077 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 CYFIP1Q7L576 1253 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 NLRX1Q86UT6 975 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 NPAS4Q8IUM7 802 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 UBALD2Q8IYN6 164 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 TMEM87AQ8NBN3 555 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 PI4K2BQ8TCG2 481 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 POF1BQ8WVV4 589 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 MSLNLQ96KJ4 702 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 ZSCAN10Q96SZ4 725 aaPredicted RBP10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 KRT23Q9C075 422 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 CPVLQ9H3G5 476 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 TLR9Q9NR96 1032 aa10.3□□□□□ -0.76
NDUFA9-209ENST00000544679 BRWD1Q9NSI6 2320 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 TRIP12Q14669 1992 aaPredicted RBP10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 KLRF2D3W0D1 207 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 ZBTB5O15062 677 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 PPFIA3O75145 1194 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 HOXA13P31271 388 aaPredicted RBP10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 SP4Q02446 784 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 PPFIA1Q13136 1202 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 MTMR3Q13615 1198 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 IFIT1BQ5T764 474 aaKnown RBP10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 CES5AQ6NT32 575 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 KLHL23Q8NBE8 558 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 LMBR1Q8WVP7 490 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 GLG1Q92896 1179 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 NKD2Q969F2 451 aaPredicted RBP10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 CDHR1Q96JP9 859 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 RIPOR3Q96MK2 946 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 CNNM2Q9H8M5 875 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 JMJD4Q9H9V9 463 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 ERAP1Q9NZ08 941 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 BARX2Q9UMQ3 279 aaPredicted RBP10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 TRPC6Q9Y210 931 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 PCDHB7Q9Y5E2 793 aa10.29□□□□□ -0.76
NDUFA9-209ENST00000544679 COL4A6Q14031 1691 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 ERICH2A1L162 156 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 RRN3P2A6NIE6 340 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 PROB1E7EW31 1015 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 CHRNA1P02708 482 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 ITGB1P05556 798 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 IBSPP21815 317 aaPredicted RBP10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 HOXC8P31273 242 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 ID4P47928 161 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 PAK2Q13177 524 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 HIC1Q14526 733 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 IMMTQ16891 758 aaKnown RBP10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 PAN2Q504Q3 1202 aaKnown RBP10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 XRRA1Q6P2D8 792 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 HOMER1Q86YM7 354 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 THNSL1Q8IYQ7 743 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 SMARCC2Q8TAQ2 1214 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 SPPL3Q8TCT6 385 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 ZNF689Q96CS4 500 aaPredicted RBP10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 GPR20Q99678 358 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 TSHZ2Q9NRE2 1034 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 CLEC1BQ9P126 229 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 TUBE1Q9UJT0 475 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 MRPL42Q9Y6G3 142 aaKnown RBP10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 SQORQ9Y6N5 450 aa10.28□□□□□ -0.76
NDUFA9-209ENST00000544679 SPATA31C2B4DYI2 1134 aa10.27□□□□□ -0.77
NDUFA9-209ENST00000544679 FOXP2O15409 715 aa10.27□□□□□ -0.77
NDUFA9-209ENST00000544679 SCG2P13521 617 aa10.27□□□□□ -0.77
NDUFA9-209ENST00000544679 HOXB8P17481 243 aaPredicted RBP10.27□□□□□ -0.77
NDUFA9-209ENST00000544679 VCPP55072 806 aaKnown RBP10.27□□□□□ -0.77
NDUFA9-209ENST00000544679 MRPS6P82932 125 aaKnown RBP10.27□□□□□ -0.77
NDUFA9-209ENST00000544679 SP2Q02086 613 aa10.27□□□□□ -0.77
NDUFA9-209ENST00000544679 KRT17Q04695 432 aa10.27□□□□□ -0.77
NDUFA9-209ENST00000544679 TRDNQ13061 729 aa10.27□□□□□ -0.77
NDUFA9-209ENST00000544679 LPIN1Q14693 890 aa10.27□□□□□ -0.77
NDUFA9-209ENST00000544679 ANKRD45Q5TZF3 282 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms