RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 SLC12A8A0AV02 714 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 FAM90A27PA6NNH2 459 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 CLASP2O75122 1294 aaKnown RBP7.54□□□□□ -1.2
LEMD3-205ENST00000544506 LRG1P02750 347 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 PTPN1P18031 435 aaKnown RBP7.54□□□□□ -1.2
LEMD3-205ENST00000544506 MASP1P48740 699 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 FOXO4P98177 505 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 ZNF124Q15973 351 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 BTBD8Q5XKL5 378 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 CPZQ66K79 652 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 PKN3Q6P5Z2 889 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 OTOP1Q7RTM1 612 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 ANKLE2Q86XL3 938 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 SYT3Q9BQG1 590 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 ORAI3Q9BRQ5 295 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 RIC8BQ9NVN3 520 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.54□□□□□ -1.2
LEMD3-205ENST00000544506 SMG5Q9UPR3 1016 aaKnown RBP7.54□□□□□ -1.2
LEMD3-205ENST00000544506 SBNO2Q9Y2G9 1366 aa7.54□□□□□ -1.2
LEMD3-205ENST00000544506 ACOT7O00154 380 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 SCDO00767 359 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 C8AP07357 584 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 CYP2C8P10632 490 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 FAHP16930 419 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 PI3P19957 117 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 SEPT7Q16181 437 aaKnown RBP7.53□□□□□ -1.2
LEMD3-205ENST00000544506 PKN1Q16512 942 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 ZNF662Q6ZS27 426 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 AHI1Q8N157 1196 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 BOCQ9BWV1 1114 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 EPB41L4AQ9HCS5 686 aaPredicted RBP7.53□□□□□ -1.2
LEMD3-205ENST00000544506 NGRNQ9NPE2 291 aaKnown RBP7.53□□□□□ -1.2
LEMD3-205ENST00000544506 B4GALT6Q9UBX8 382 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 PRKAB1Q9Y478 270 aa7.53□□□□□ -1.2
LEMD3-205ENST00000544506 PTPDC1A2A3K4 754 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 ZNF891A8MT65 544 aaPredicted RBP7.52□□□□□ -1.21
LEMD3-205ENST00000544506 KRT37O76014 449 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 GJA4P35212 333 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 RAP1GAPP47736 663 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 NKX3-2P78367 333 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 IRF9Q00978 393 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 SEC23AQ15436 765 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 ARHGAP44Q17R89 818 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 SKOR2Q2VWA4 1001 aaPredicted RBP7.52□□□□□ -1.21
LEMD3-205ENST00000544506 RNF180Q86T96 592 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 FAM129CQ86XR2 697 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 CNOT6Q9ULM6 557 aaKnown RBP7.52□□□□□ -1.21
LEMD3-205ENST00000544506 MAPRE3Q9UPY8 281 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 KCTD3Q9Y597 815 aa7.52□□□□□ -1.21
LEMD3-205ENST00000544506 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.51□□□□□ -1.21
LEMD3-205ENST00000544506 PLA2G1BP04054 148 aaKnown RBP7.51□□□□□ -1.21
LEMD3-205ENST00000544506 ZBTB48P10074 688 aaPredicted RBP7.51□□□□□ -1.21
LEMD3-205ENST00000544506 STAT3P40763 770 aa7.51□□□□□ -1.21
LEMD3-205ENST00000544506 LINC00310P59036 64 aa7.51□□□□□ -1.21
LEMD3-205ENST00000544506 KCNA10Q16322 511 aa7.51□□□□□ -1.21
LEMD3-205ENST00000544506 PROSER1Q86XN7 944 aa7.51□□□□□ -1.21
LEMD3-205ENST00000544506 NXPE1Q8N323 547 aa7.51□□□□□ -1.21
LEMD3-205ENST00000544506 LEO1Q8WVC0 666 aaPredicted RBP7.51□□□□□ -1.21
LEMD3-205ENST00000544506 NOX5Q96PH1 765 aa7.51□□□□□ -1.21
LEMD3-205ENST00000544506 GORASP1Q9BQQ3 440 aa7.51□□□□□ -1.21
LEMD3-205ENST00000544506 HSPBP1Q9NZL4 362 aa7.51□□□□□ -1.21
LEMD3-205ENST00000544506 RBPJLQ9UBG7 517 aa7.51□□□□□ -1.21
LEMD3-205ENST00000544506 PRAMEF25A6NGN4 478 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 NPIPB6E9PJ23 425 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 HIP1RO75146 1068 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 C4BPAP04003 597 aaKnown RBP7.5□□□□□ -1.21
LEMD3-205ENST00000544506 YBX3P16989 372 aaKnown RBP eCLIP7.5□□□□□ -1.21
LEMD3-205ENST00000544506 DSG1Q02413 1049 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 CD276Q5ZPR3 534 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 CNKSR3Q6P9H4 555 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 KIF18BQ86Y91 864 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 FAM177A1Q8N128 213 aaPredicted RBP7.5□□□□□ -1.21
LEMD3-205ENST00000544506 DLG3Q92796 817 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 KCNH7Q9NS40 1196 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 WASF3Q9UPY6 502 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 B3GALT1Q9Y5Z6 326 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 PMF1-BGLAPU3KQ54 211 aa7.5□□□□□ -1.21
LEMD3-205ENST00000544506 RFXAPO00287 272 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 F2P00734 622 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 ITGA1P56199 1179 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 HTRA3P83110 453 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 CREB3L3Q68CJ9 461 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 TMC5Q6UXY8 1006 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 LIPIQ6XZB0 460 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 STK32CQ86UX6 486 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 UBR7Q8N806 425 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 CHAC2Q8WUX2 184 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 CAAP1Q9H8G2 361 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 PCDH18Q9HCL0 1135 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 ZKSCAN5Q9Y2L8 839 aa7.49□□□□□ -1.21
LEMD3-205ENST00000544506 H7C1D1 291 aa7.48□□□□□ -1.21
LEMD3-205ENST00000544506 DVL2O14641 736 aa7.48□□□□□ -1.21
LEMD3-205ENST00000544506 GAS7O60861 476 aa7.48□□□□□ -1.21
LEMD3-205ENST00000544506 VIL1P09327 827 aaKnown RBP7.48□□□□□ -1.21
LEMD3-205ENST00000544506 ATP2A2P16615 1042 aaKnown RBP7.48□□□□□ -1.21
LEMD3-205ENST00000544506 SOX5P35711 763 aa7.48□□□□□ -1.21
LEMD3-205ENST00000544506 DBPQ10586 325 aaPredicted RBP7.48□□□□□ -1.21
LEMD3-205ENST00000544506 VASNQ6EMK4 673 aa7.48□□□□□ -1.21
LEMD3-205ENST00000544506 FILIP1Q7Z7B0 1213 aa7.48□□□□□ -1.21
LEMD3-205ENST00000544506 FNIP1Q8TF40 1166 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms