RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 LRFN3Q9BTN0 628 aa9.59□□□□□ -0.87
CLPB-211ENST00000542555 TBX21Q9UL17 535 aa9.59□□□□□ -0.87
CLPB-211ENST00000542555 SLC4A7Q9Y6M7 1214 aa9.59□□□□□ -0.87
CLPB-211ENST00000542555 ERC2O15083 957 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 ZEB2O60315 1214 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 ADAMTS4O75173 837 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 MAP3K6O95382 1288 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 ASGR1P07306 291 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 SHMT1P34896 483 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 ICA1Q05084 483 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 TMEM132BQ14DG7 1078 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 TTF1Q15361 905 aaPredicted RBP9.58□□□□□ -0.88
CLPB-211ENST00000542555 ZNF792Q3KQV3 632 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 NOL8Q76FK4 1167 aaKnown RBP9.58□□□□□ -0.88
CLPB-211ENST00000542555 DHX32Q7L7V1 743 aaKnown RBP9.58□□□□□ -0.88
CLPB-211ENST00000542555 OTOP2Q7RTS6 562 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 KRT25Q7Z3Z0 450 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 PLEKHM2Q8IWE5 1019 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 SPICE1Q8N0Z3 855 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 STAG2Q8N3U4 1231 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 SCG3Q8WXD2 468 aaKnown RBP9.58□□□□□ -0.88
CLPB-211ENST00000542555 CCDC17Q96LX7 622 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 NECAB3Q96P71 396 aaPredicted RBP9.58□□□□□ -0.88
CLPB-211ENST00000542555 C2orf49Q9BVC5 232 aaPredicted RBP9.58□□□□□ -0.88
CLPB-211ENST00000542555 SEZ6LQ9BYH1 1024 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 HIPK3Q9H422 1215 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 VCPKMTQ9H867 229 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 PIH1D3Q9NQM4 214 aaKnown RBP9.58□□□□□ -0.88
CLPB-211ENST00000542555 COG6Q9Y2V7 657 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 TMX2Q9Y320 296 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 ROBO3Q96MS0 1386 aa9.58□□□□□ -0.88
CLPB-211ENST00000542555 SIPA1L1O43166 1804 aa9.57□□□□□ -0.88
CLPB-211ENST00000542555 KIF28PB7ZC32 967 aa9.57□□□□□ -0.88
CLPB-211ENST00000542555 TGFBR3LH3BV60 316 aa9.57□□□□□ -0.88
CLPB-211ENST00000542555 SURF6O75683 361 aaKnown RBP9.57□□□□□ -0.88
CLPB-211ENST00000542555 CABYRO75952 493 aa9.57□□□□□ -0.88
CLPB-211ENST00000542555 ZNF865P0CJ78 1059 aaPredicted RBP9.57□□□□□ -0.88
CLPB-211ENST00000542555 TAL1P17542 331 aaPredicted RBP9.57□□□□□ -0.88
CLPB-211ENST00000542555 CST5P28325 142 aaPredicted RBP9.57□□□□□ -0.88
CLPB-211ENST00000542555 PLCD1P51178 756 aa9.57□□□□□ -0.88
CLPB-211ENST00000542555 SLFN5Q08AF3 891 aa9.57□□□□□ -0.88
CLPB-211ENST00000542555 TMEM67Q5HYA8 995 aa9.57□□□□□ -0.88
CLPB-211ENST00000542555 RASIP1Q5U651 963 aa9.57□□□□□ -0.88
CLPB-211ENST00000542555 KLHDC9Q8NEP7 349 aa9.57□□□□□ -0.88
CLPB-211ENST00000542555 ARHGAP45Q92619 1136 aa9.57□□□□□ -0.88
CLPB-211ENST00000542555 PCDHA11Q9Y5I1 949 aa9.57□□□□□ -0.88
CLPB-211ENST00000542555 A0A1W2PRG0 241 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 PFKMP08237 780 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 ACTN1P12814 892 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 ATP2A2P16615 1042 aaKnown RBP9.56□□□□□ -0.88
CLPB-211ENST00000542555 CYP2C18P33260 490 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 GUCY1A2P33402 732 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 CDK7P50613 346 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 TFF2Q03403 129 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 ACVR2BQ13705 512 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 RTN1Q16799 776 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 C16orf59Q7L2K0 433 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 TTC9Q92623 222 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 TEX13BQ9BXU2 312 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 AP5M1Q9H0R1 490 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 MRPL18Q9H0U6 180 aaKnown RBP9.56□□□□□ -0.88
CLPB-211ENST00000542555 SMG9Q9H0W8 520 aaKnown RBP9.56□□□□□ -0.88
CLPB-211ENST00000542555 ABHD16BQ9H3Z7 469 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 EPHX3Q9H6B9 360 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 MYH1P12882 1939 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 TTC28Q96AY4 2481 aa9.56□□□□□ -0.88
CLPB-211ENST00000542555 PNMA6EA0A0J9YXQ4 647 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 VWA5AO00534 786 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 ZBED4O75132 1171 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 DEAF1O75398 565 aaPredicted RBP9.55□□□□□ -0.88
CLPB-211ENST00000542555 CD97P48960 835 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 KCNQ1P51787 676 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 GJA9P57773 515 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 FAM126BQ8IXS8 530 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 SIX5Q8N196 739 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 ANKRD35Q8N283 1001 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 KANSL2Q9H9L4 492 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 FBXO40Q9UH90 709 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 PPP1R9AQ9ULJ8 1098 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.55□□□□□ -0.88
CLPB-211ENST00000542555 PLXNA1Q9UIW2 1896 aa9.55□□□□□ -0.88
CLPB-211ENST00000542555 FOCADQ5VW36 1801 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 GSC2O15499 205 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 ALX3O95076 343 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 SUPT20HL2P0C7V6 817 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 RARAP10276 462 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 RABGGTBP53611 331 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 CCL23P55773 120 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 GABPAQ06546 454 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 CCDC144BQ3MJ40 725 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 SNRNP48Q6IEG0 339 aaKnown RBP9.54□□□□□ -0.88
CLPB-211ENST00000542555 MAMDC4Q6UXC1 1216 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 CPXCR1Q8N123 301 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 UIMC1Q96RL1 719 aa9.54□□□□□ -0.88
CLPB-211ENST00000542555 CCDC8Q9H0W5 538 aaPredicted RBP9.54□□□□□ -0.88
CLPB-211ENST00000542555 YBX2Q9Y2T7 364 aaKnown RBP9.54□□□□□ -0.88
CLPB-211ENST00000542555 ZBTB42B2RXF5 422 aa9.53□□□□□ -0.88
CLPB-211ENST00000542555 SMIM22K7EJ46 135 aa9.53□□□□□ -0.88
CLPB-211ENST00000542555 SNAI1O95863 264 aaPredicted RBP9.53□□□□□ -0.88
CLPB-211ENST00000542555 EIF2AK2P19525 551 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms