RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	ANKRD13C	Q8N6S4	541 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	SMC1B	Q8NDV3	1235 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	PPP1R9B	Q96SB3	815 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	NUDT12	Q9BQG2	462 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	HNRNPDL	O14979	420 aa	Known RBP	13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	MAFG	O15525	162 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	MYL3	P08590	195 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	DSG3	P32926	999 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	PSMC5	P62195	406 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	MORC3	Q14149	939 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	VWA3B	Q502W6	1294 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	SPATA1	Q5VX52	437 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	DYDC1	Q8WWB3	177 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	PAGE5	Q96GU1	130 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	DYDC2	Q96IM9	177 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	ACCS	Q96QU6	501 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	NUP58	Q9BVL2	599 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	ZNF302	Q9NR11	478 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	SLC9A2	Q9UBY0	812 aa		13.6	□□□□□ -0.23
ABCB8-222	ENST00000542328	FAM205C	A6NFA0	338 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	ALDH1A1	P00352	501 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	XRCC5	P13010	732 aa	Known RBP	13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	ERCC5	P28715	1186 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	GBP2	P32456	591 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	PPIL2	Q13356	520 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	GRAMD1C	Q8IYS0	662 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	LMBR1	Q8WVP7	490 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	TCP11	Q8WWU5	503 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	GNAT1	P11488	350 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	CYP2B6	P20813	491 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	CACNB1	Q02641	598 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	LRMP	Q12912	555 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	CYP26C1	Q6V0L0	522 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	MAATS1	Q7Z4T9	603 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	MSANTD4	Q8NCY6	345 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	PIGO	Q8TEQ8	1089 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	GJA10	Q969M2	543 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	SPATA33	Q96N06	139 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	GABBR1	Q9UBS5	961 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	ITGB4	P16144	1822 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	FSD2	A1L4K1	749 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	DDIT3	P35638	169 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	HERVK_113	P62684	666 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	ADAM9	Q13443	819 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	ALCAM	Q13740	583 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	NTRK3	Q16288	839 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	WDR18	Q9BV38	432 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	TMEM206	Q9H813	350 aa		13.59	□□□□□ -0.23
ABCB8-222	ENST00000542328	PITPNM2	Q9BZ72	1349 aa		13.58	□□□□□ -0.23
ABCB8-222	ENST00000542328	MYC	P01106	439 aa	Predicted RBP	13.58	□□□□□ -0.23
ABCB8-222	ENST00000542328	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.58	□□□□□ -0.23
ABCB8-222	ENST00000542328	SWSAP1	Q6NVH7	229 aa		13.58	□□□□□ -0.23
ABCB8-222	ENST00000542328	HOOK3	Q86VS8	718 aa		13.58	□□□□□ -0.23
ABCB8-222	ENST00000542328	BANK1	Q8NDB2	785 aa		13.58	□□□□□ -0.23
ABCB8-222	ENST00000542328	POMGNT1	Q8WZA1	660 aa		13.58	□□□□□ -0.23
ABCB8-222	ENST00000542328	JPH1	Q9HDC5	661 aa	Predicted RBP	13.58	□□□□□ -0.23
ABCB8-222	ENST00000542328	RHOXF2B	P0C7M4	288 aa		13.58	□□□□□ -0.24
ABCB8-222	ENST00000542328	ADK	P55263	362 aa	Known RBP	13.58	□□□□□ -0.24
ABCB8-222	ENST00000542328	TMTC1	Q8IUR5	882 aa		13.58	□□□□□ -0.24
ABCB8-222	ENST00000542328	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCB8-222	ENST00000542328	RHOXF2	Q9BQY4	288 aa		13.58	□□□□□ -0.24
ABCB8-222	ENST00000542328	POTEB3	A0JP26	581 aa		13.58	□□□□□ -0.24
ABCB8-222	ENST00000542328	POTEC	B2RU33	542 aa		13.58	□□□□□ -0.24
ABCB8-222	ENST00000542328	YARS	P54577	528 aa	Known RBP	13.58	□□□□□ -0.24
ABCB8-222	ENST00000542328	TATDN1	Q6P1N9	297 aa		13.58	□□□□□ -0.24
ABCB8-222	ENST00000542328	POTEB	Q6S5H4	581 aa		13.58	□□□□□ -0.24
ABCB8-222	ENST00000542328	MXRA8	Q9BRK3	442 aa		13.58	□□□□□ -0.24
ABCB8-222	ENST00000542328	TMEM110-MUSTN1	A8MSY1	372 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	GGPS1	O95749	300 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	SCFD2	Q8WU76	684 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	EEF2KMT	Q96G04	330 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	C10orf71	Q711Q0	1435 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	SMIM22	K7EJ46	135 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	MAPK4	P31152	587 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	FCGRT	P55899	365 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	C7orf43	Q8WVR3	580 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	KIFAP3	Q92845	792 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	TAAR1	Q96RJ0	339 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	ATP6V0A4	Q9HBG4	840 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	KCNJ18	B7U540	433 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	N4BP1	O75113	896 aa	Known RBP	13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	STAM2	O75886	525 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	KCNJ12	Q14500	433 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	DPCR1	Q3MIW9	517 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	PADI6	Q6TGC4	694 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	DPH6	Q7L8W6	267 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	PLEKHH3	Q7Z736	793 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	RNF169	Q8NCN4	708 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	P2RX5	Q93086	422 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	CCSER1	Q9C0I3	900 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	SPATC1L	Q9H0A9	340 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	MAN1B1	Q9UKM7	699 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328		E9PMD0	336 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	PDHX	O00330	501 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	OAZ1	P54368	228 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	KRT222	Q8N1A0	295 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	RAD54L	Q92698	747 aa		13.57	□□□□□ -0.24
ABCB8-222	ENST00000542328	ZBTB9	Q96C00	473 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms