RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 C17orf80Q9BSJ5 609 aa22.85■■□□□ 1.25
DDX11-220ENST00000542244 PCDHA6Q9UN73 950 aa22.85■■□□□ 1.25
DDX11-220ENST00000542244 PCDHA8Q9Y5H6 950 aa22.85■■□□□ 1.25
DDX11-220ENST00000542244 TCF20Q9UGU0 1960 aaKnown RBP22.85■■□□□ 1.25
DDX11-220ENST00000542244 CNTNAP5Q8WYK1 1306 aa22.84■■□□□ 1.25
DDX11-220ENST00000542244 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.84■■□□□ 1.25
DDX11-220ENST00000542244 ADAMTS3O15072 1205 aa22.84■■□□□ 1.25
DDX11-220ENST00000542244 CPA1P15085 419 aa22.84■■□□□ 1.25
DDX11-220ENST00000542244 MARK3P27448 753 aa22.84■■□□□ 1.25
DDX11-220ENST00000542244 TCF7P36402 384 aaPredicted RBP22.84■■□□□ 1.25
DDX11-220ENST00000542244 ARHGAP4P98171 946 aa22.84■■□□□ 1.25
DDX11-220ENST00000542244 BMP2KLQ5H9B9 411 aa22.84■■□□□ 1.25
DDX11-220ENST00000542244 MYOCDQ8IZQ8 938 aa22.84■■□□□ 1.25
DDX11-220ENST00000542244 UHRF1Q96T88 793 aaPredicted RBP22.84■■□□□ 1.25
DDX11-220ENST00000542244 SENP7Q9BQF6 1050 aa22.84■■□□□ 1.25
DDX11-220ENST00000542244 FAM217BQ9NTX9 383 aaPredicted RBP22.84■■□□□ 1.25
DDX11-220ENST00000542244 GTPBP6O43824 516 aaPredicted RBP22.83■■□□□ 1.25
DDX11-220ENST00000542244 ERVK-21P61565 698 aa22.83■■□□□ 1.25
DDX11-220ENST00000542244 XRRA1Q6P2D8 792 aa22.83■■□□□ 1.25
DDX11-220ENST00000542244 APOA5Q6Q788 366 aa22.83■■□□□ 1.25
DDX11-220ENST00000542244 NLRX1Q86UT6 975 aa22.83■■□□□ 1.25
DDX11-220ENST00000542244 PCYT2Q99447 389 aa22.83■■□□□ 1.25
DDX11-220ENST00000542244 CHRNA1P02708 482 aa22.82■■□□□ 1.24
DDX11-220ENST00000542244 CALM1P0DP23 149 aa22.82■■□□□ 1.24
DDX11-220ENST00000542244 CALM2P0DP24 149 aa22.82■■□□□ 1.24
DDX11-220ENST00000542244 CALM3P0DP25 149 aa22.82■■□□□ 1.24
DDX11-220ENST00000542244 GPRASP2Q96D09 838 aa22.82■■□□□ 1.24
DDX11-220ENST00000542244 NEK1Q96PY6 1258 aa22.82■■□□□ 1.24
DDX11-220ENST00000542244 TMEM260Q9NX78 707 aa22.82■■□□□ 1.24
DDX11-220ENST00000542244 MICAL3Q7RTP6 2002 aa22.82■■□□□ 1.24
DDX11-220ENST00000542244 EMSYQ7Z589 1322 aa22.82■■□□□ 1.24
DDX11-220ENST00000542244 CDC27P30260 824 aa22.81■■□□□ 1.24
DDX11-220ENST00000542244 HTRA4P83105 476 aaPredicted RBP22.81■■□□□ 1.24
DDX11-220ENST00000542244 MARCH8Q5T0T0 291 aa22.81■■□□□ 1.24
DDX11-220ENST00000542244 TGS1Q96RS0 853 aaKnown RBP22.81■■□□□ 1.24
DDX11-220ENST00000542244 JADE2Q9NQC1 790 aa22.81■■□□□ 1.24
DDX11-220ENST00000542244 UPP2O95045 317 aa22.8■■□□□ 1.24
DDX11-220ENST00000542244 ARP10275 920 aa22.8■■□□□ 1.24
DDX11-220ENST00000542244 MTMR1Q13613 665 aa22.8■■□□□ 1.24
DDX11-220ENST00000542244 FAM26DQ5JW98 314 aa22.8■■□□□ 1.24
DDX11-220ENST00000542244 RAPGEFL1Q9UHV5 662 aa22.8■■□□□ 1.24
DDX11-220ENST00000542244 V9GY48 417 aaPredicted RBP22.8■■□□□ 1.24
DDX11-220ENST00000542244 SIP14410 1827 aa22.8■■□□□ 1.24
DDX11-220ENST00000542244 EFCAB14O75071 495 aa22.79■■□□□ 1.24
DDX11-220ENST00000542244 AMHP03971 560 aa22.79■■□□□ 1.24
DDX11-220ENST00000542244 MGAT3Q09327 533 aa22.79■■□□□ 1.24
DDX11-220ENST00000542244 SP7Q8TDD2 431 aaPredicted RBP22.79■■□□□ 1.24
DDX11-220ENST00000542244 SEPT1Q8WYJ6 367 aa22.79■■□□□ 1.24
DDX11-220ENST00000542244 SEPT8Q92599 483 aa22.79■■□□□ 1.24
DDX11-220ENST00000542244 TSPYL2Q9H2G4 693 aaPredicted RBP22.79■■□□□ 1.24
DDX11-220ENST00000542244 ZNF215Q9UL58 517 aaPredicted RBP22.79■■□□□ 1.24
DDX11-220ENST00000542244 SPDYE3A6NKU9 549 aa22.78■■□□□ 1.24
DDX11-220ENST00000542244 STXBP3O00186 592 aa22.78■■□□□ 1.24
DDX11-220ENST00000542244 GHRP10912 638 aa22.78■■□□□ 1.24
DDX11-220ENST00000542244 CENPQQ7L2Z9 268 aaPredicted RBP22.78■■□□□ 1.24
DDX11-220ENST00000542244 DHX32Q7L7V1 743 aaKnown RBP22.78■■□□□ 1.24
DDX11-220ENST00000542244 TOP1MTQ969P6 601 aa22.78■■□□□ 1.24
DDX11-220ENST00000542244 UIMC1Q96RL1 719 aa22.78■■□□□ 1.24
DDX11-220ENST00000542244 INSL6Q9Y581 213 aa22.78■■□□□ 1.24
DDX11-220ENST00000542244 NAPAP54920 295 aa22.77■■□□□ 1.24
DDX11-220ENST00000542244 IGBP1P78318 339 aa22.77■■□□□ 1.24
DDX11-220ENST00000542244 PPFIA1Q13136 1202 aa22.77■■□□□ 1.24
DDX11-220ENST00000542244 ITGB3BPQ13352 177 aaPredicted RBP22.77■■□□□ 1.24
DDX11-220ENST00000542244 GRIK4Q16099 956 aa22.77■■□□□ 1.24
DDX11-220ENST00000542244 RTN1Q16799 776 aa22.77■■□□□ 1.24
DDX11-220ENST00000542244 TRAPPC12Q8WVT3 735 aa22.77■■□□□ 1.24
DDX11-220ENST00000542244 DNAJB3Q8WWF6 145 aa22.77■■□□□ 1.24
DDX11-220ENST00000542244 MXRA8Q9BRK3 442 aa22.77■■□□□ 1.24
DDX11-220ENST00000542244 RIC8AQ9NPQ8 531 aa22.77■■□□□ 1.24
DDX11-220ENST00000542244 KCNH7Q9NS40 1196 aa22.77■■□□□ 1.24
DDX11-220ENST00000542244 NRCAMQ92823 1304 aa22.77■■□□□ 1.24
DDX11-220ENST00000542244 KLF18A0A0U1RQI7 1052 aa22.76■■□□□ 1.23
DDX11-220ENST00000542244 ZBTB43O43298 467 aa22.76■■□□□ 1.23
DDX11-220ENST00000542244 CAND2O75155 1236 aa22.76■■□□□ 1.23
DDX11-220ENST00000542244 GNAT1P11488 350 aa22.76■■□□□ 1.23
DDX11-220ENST00000542244 LPIN1Q14693 890 aa22.76■■□□□ 1.23
DDX11-220ENST00000542244 TSGA10IPQ3SY00 556 aa22.76■■□□□ 1.23
DDX11-220ENST00000542244 GIMAP8Q8ND71 665 aaPredicted RBP22.76■■□□□ 1.23
DDX11-220ENST00000542244 IFIH1Q9BYX4 1025 aaKnown RBP22.76■■□□□ 1.23
DDX11-220ENST00000542244 EHMT1Q9H9B1 1298 aa22.76■■□□□ 1.23
DDX11-220ENST00000542244 MBLAC1A4D2B0 266 aaPredicted RBP22.75■■□□□ 1.23
DDX11-220ENST00000542244 GOLGA8AA7E2F4 631 aa22.75■■□□□ 1.23
DDX11-220ENST00000542244 GOLGA8BA8MQT2 603 aa22.75■■□□□ 1.23
DDX11-220ENST00000542244 PPFIA3O75145 1194 aa22.75■■□□□ 1.23
DDX11-220ENST00000542244 ADD1P35611 737 aaKnown RBP22.75■■□□□ 1.23
DDX11-220ENST00000542244 FBXO22Q8NEZ5 403 aa22.75■■□□□ 1.23
DDX11-220ENST00000542244 GLG1Q92896 1179 aa22.75■■□□□ 1.23
DDX11-220ENST00000542244 HLA-CQ95604 372 aa22.75■■□□□ 1.23
DDX11-220ENST00000542244 ANO3Q9BYT9 981 aa22.75■■□□□ 1.23
DDX11-220ENST00000542244 CDC45O75419 566 aa22.74■■□□□ 1.23
DDX11-220ENST00000542244 INSRRP14616 1297 aa22.74■■□□□ 1.23
DDX11-220ENST00000542244 CLK2P49760 499 aaKnown RBP22.74■■□□□ 1.23
DDX11-220ENST00000542244 APOBRQ0VD83 1088 aa22.74■■□□□ 1.23
DDX11-220ENST00000542244 EPC2Q52LR7 807 aa22.74■■□□□ 1.23
DDX11-220ENST00000542244 RNF20Q5VTR2 975 aa22.74■■□□□ 1.23
DDX11-220ENST00000542244 SYNE3Q6ZMZ3 975 aa22.74■■□□□ 1.23
DDX11-220ENST00000542244 IL27Q8NEV9 243 aa22.74■■□□□ 1.23
DDX11-220ENST00000542244 KHSRPQ92945 711 aaKnown RBP eCLIP22.74■■□□□ 1.23
DDX11-220ENST00000542244 CDHR1Q96JP9 859 aa22.74■■□□□ 1.23
DDX11-220ENST00000542244 AGO3Q9H9G7 860 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms