RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 RBL2Q08999 1139 aa16.09■□□□□ 0.17
SUDS3-203ENST00000541591 FUT2Q10981 343 aa16.09■□□□□ 0.17
SUDS3-203ENST00000541591 SERINC5Q86VE9 423 aa16.09■□□□□ 0.17
SUDS3-203ENST00000541591 CYP2W1Q8TAV3 490 aa16.09■□□□□ 0.17
SUDS3-203ENST00000541591 LMBR1Q8WVP7 490 aa16.09■□□□□ 0.17
SUDS3-203ENST00000541591 ZBED2Q9BTP6 218 aa16.09■□□□□ 0.17
SUDS3-203ENST00000541591 SNX14Q9Y5W7 946 aa16.09■□□□□ 0.17
SUDS3-203ENST00000541591 V9GY48 417 aaPredicted RBP16.09■□□□□ 0.17
SUDS3-203ENST00000541591 BRWD1Q9NSI6 2320 aa16.08■□□□□ 0.17
SUDS3-203ENST00000541591 GSTTP1A0A1W2PQM5 241 aa16.08■□□□□ 0.16
SUDS3-203ENST00000541591 STXBP3O00186 592 aa16.08■□□□□ 0.16
SUDS3-203ENST00000541591 BAIAP3O94812 1187 aa16.08■□□□□ 0.16
SUDS3-203ENST00000541591 CXCL10P02778 98 aa16.08■□□□□ 0.16
SUDS3-203ENST00000541591 ADD1P35611 737 aaKnown RBP16.08■□□□□ 0.16
SUDS3-203ENST00000541591 MTMR1Q13613 665 aa16.08■□□□□ 0.16
SUDS3-203ENST00000541591 RUFY4Q6ZNE9 571 aa16.08■□□□□ 0.16
SUDS3-203ENST00000541591 GDPD5Q8WTR4 605 aa16.08■□□□□ 0.16
SUDS3-203ENST00000541591 RBM28Q9NW13 759 aaKnown RBP16.08■□□□□ 0.16
SUDS3-203ENST00000541591 UBIAD1Q9Y5Z9 338 aa16.08■□□□□ 0.16
SUDS3-203ENST00000541591 RSPH10B2B2RC85 870 aa16.07■□□□□ 0.16
SUDS3-203ENST00000541591 DDX39AO00148 427 aaKnown RBP16.07■□□□□ 0.16
SUDS3-203ENST00000541591 LGR5O75473 907 aa16.07■□□□□ 0.16
SUDS3-203ENST00000541591 RSPH10BP0C881 870 aa16.07■□□□□ 0.16
SUDS3-203ENST00000541591 ADCY7P51828 1080 aa16.07■□□□□ 0.16
SUDS3-203ENST00000541591 IGBP1P78318 339 aa16.07■□□□□ 0.16
SUDS3-203ENST00000541591 JAKMIP3Q5VZ66 844 aa16.07■□□□□ 0.16
SUDS3-203ENST00000541591 DBF4BQ8NFT6 615 aa16.07■□□□□ 0.16
SUDS3-203ENST00000541591 BRF1Q92994 677 aa16.07■□□□□ 0.16
SUDS3-203ENST00000541591 GPRASP2Q96D09 838 aa16.07■□□□□ 0.16
SUDS3-203ENST00000541591 USP26Q9BXU7 913 aa16.07■□□□□ 0.16
SUDS3-203ENST00000541591 ANO3Q9BYT9 981 aa16.07■□□□□ 0.16
SUDS3-203ENST00000541591 FNDC1Q4ZHG4 1894 aaPredicted RBP16.06■□□□□ 0.16
SUDS3-203ENST00000541591 PLXNA4Q9HCM2 1894 aa16.06■□□□□ 0.16
SUDS3-203ENST00000541591 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
SUDS3-203ENST00000541591 ARP10275 920 aa16.06■□□□□ 0.16
SUDS3-203ENST00000541591 HOXC8P31273 242 aa16.06■□□□□ 0.16
SUDS3-203ENST00000541591 METAP2P50579 478 aaKnown RBP eCLIP16.06■□□□□ 0.16
SUDS3-203ENST00000541591 MYOCDQ8IZQ8 938 aa16.06■□□□□ 0.16
SUDS3-203ENST00000541591 PHOSPHO2Q8TCD6 241 aa16.06■□□□□ 0.16
SUDS3-203ENST00000541591 LARP6Q9BRS8 491 aaKnown RBP16.06■□□□□ 0.16
SUDS3-203ENST00000541591 RIC8AQ9NPQ8 531 aa16.06■□□□□ 0.16
SUDS3-203ENST00000541591 ZNF215Q9UL58 517 aaPredicted RBP16.06■□□□□ 0.16
SUDS3-203ENST00000541591 MYO7AQ13402 2215 aa16.06■□□□□ 0.16
SUDS3-203ENST00000541591 KIF28PB7ZC32 967 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 UPP2O95045 317 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 HSPA4P34932 840 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 TFF2Q03403 129 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 PPFIA1Q13136 1202 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 IKBKEQ14164 716 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 KRT32Q14532 448 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 SKIV2LQ15477 1246 aaKnown RBP16.05■□□□□ 0.16
SUDS3-203ENST00000541591 TSGA10IPQ3SY00 556 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 XRRA1Q6P2D8 792 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 TRAPPC12Q8WVT3 735 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 GLG1Q92896 1179 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 PHKBQ93100 1093 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 SENP7Q9BQF6 1050 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 JADE2Q9NQC1 790 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 THEGQ9P2T0 379 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 TTC3P53804 2025 aa16.05■□□□□ 0.16
SUDS3-203ENST00000541591 DTNBO60941 627 aa16.04■□□□□ 0.16
SUDS3-203ENST00000541591 CCT2P78371 535 aaKnown RBP16.04■□□□□ 0.16
SUDS3-203ENST00000541591 GRB10Q13322 594 aa16.04■□□□□ 0.16
SUDS3-203ENST00000541591 GRIK4Q16099 956 aa16.04■□□□□ 0.16
SUDS3-203ENST00000541591 BLOC1S2Q6QNY1 142 aa16.04■□□□□ 0.16
SUDS3-203ENST00000541591 RASGRP4Q8TDF6 673 aa16.04■□□□□ 0.16
SUDS3-203ENST00000541591 PCYT2Q99447 389 aa16.04■□□□□ 0.16
SUDS3-203ENST00000541591 MXRA8Q9BRK3 442 aa16.04■□□□□ 0.16
SUDS3-203ENST00000541591 FAM49AQ9H0Q0 323 aaPredicted RBP16.04■□□□□ 0.16
SUDS3-203ENST00000541591 NCOA5Q9HCD5 579 aaKnown RBP16.04■□□□□ 0.16
SUDS3-203ENST00000541591 KCNH7Q9NS40 1196 aa16.04■□□□□ 0.16
SUDS3-203ENST00000541591 MTCH2Q9Y6C9 303 aa16.04■□□□□ 0.16
SUDS3-203ENST00000541591 COL4A6Q14031 1691 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 ABHD14A-ACY1A0A1B0GW23 586 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 GJB5O95377 273 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 RPS6KB1P23443 525 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 ADAM17P78536 824 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 TMEM62Q0P6H9 643 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 ITGB3BPQ13352 177 aaPredicted RBP16.03■□□□□ 0.16
SUDS3-203ENST00000541591 PLEKHG4Q58EX7 1191 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 SEPT1Q8WYJ6 367 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 KCNB2Q92953 911 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 EHMT1Q9H9B1 1298 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 JPH1Q9HDC5 661 aaPredicted RBP16.03■□□□□ 0.16
SUDS3-203ENST00000541591 BARHL2Q9NY43 387 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 SLC9A2Q9UBY0 812 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 XIRP2A4UGR9 3374 aa16.03■□□□□ 0.16
SUDS3-203ENST00000541591 EMSYQ7Z589 1322 aa16.02■□□□□ 0.16
SUDS3-203ENST00000541591 LINC01553A4QN01 128 aa16.02■□□□□ 0.16
SUDS3-203ENST00000541591 LPXNO60711 386 aa16.02■□□□□ 0.16
SUDS3-203ENST00000541591 CHRNA1P02708 482 aa16.02■□□□□ 0.16
SUDS3-203ENST00000541591 GHRP10912 638 aa16.02■□□□□ 0.16
SUDS3-203ENST00000541591 ZNF76P36508 570 aa16.02■□□□□ 0.16
SUDS3-203ENST00000541591 PPP1R18Q6NYC8 613 aa16.02■□□□□ 0.16
SUDS3-203ENST00000541591 GIMAP8Q8ND71 665 aaPredicted RBP16.02■□□□□ 0.16
SUDS3-203ENST00000541591 DNAJB3Q8WWF6 145 aa16.02■□□□□ 0.16
SUDS3-203ENST00000541591 CDHR1Q96JP9 859 aa16.02■□□□□ 0.16
SUDS3-203ENST00000541591 NECAB3Q96P71 396 aaPredicted RBP16.02■□□□□ 0.16
SUDS3-203ENST00000541591 C17orf80Q9BSJ5 609 aa16.02■□□□□ 0.16
SUDS3-203ENST00000541591 AGO4Q9HCK5 861 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms