RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 A0A087WWV3 80 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 RGS20O76081 388 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 PRR29P0C7W0 189 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 ITGB5P18084 799 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 CEP55Q53EZ4 464 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 SH3RF1Q7Z6J0 888 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 TRPV1Q8NER1 839 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 PAGE5Q96GU1 130 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 MXRA8Q9BRK3 442 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 MCOLN1Q9GZU1 580 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 KATNBL1Q9H079 304 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 VTA1Q9NP79 307 aa31.19■■■□□ 2.58
CCM2-218ENST00000541586 MSH4O15457 936 aa31.18■■■□□ 2.58
CCM2-218ENST00000541586 STAM2O75886 525 aa31.18■■■□□ 2.58
CCM2-218ENST00000541586 STAT6P42226 847 aa31.18■■■□□ 2.58
CCM2-218ENST00000541586 RRAGBQ5VZM2 374 aa31.18■■■□□ 2.58
CCM2-218ENST00000541586 FAM20AQ96MK3 541 aa31.18■■■□□ 2.58
CCM2-218ENST00000541586 UBIAD1Q9Y5Z9 338 aa31.18■■■□□ 2.58
CCM2-218ENST00000541586 ZNF865P0CJ78 1059 aaPredicted RBP31.18■■■□□ 2.58
CCM2-218ENST00000541586 CCND3P30281 292 aaPredicted RBP31.18■■■□□ 2.58
CCM2-218ENST00000541586 ZRSR1Q15695 479 aaKnown RBP31.18■■■□□ 2.58
CCM2-218ENST00000541586 GNPTABQ3T906 1256 aa31.18■■■□□ 2.58
CCM2-218ENST00000541586 TAPT1Q6NXT6 567 aa31.18■■■□□ 2.58
CCM2-218ENST00000541586 NLRX1Q86UT6 975 aa31.18■■■□□ 2.58
CCM2-218ENST00000541586 PCDHA5Q9Y5H7 936 aa31.18■■■□□ 2.58
CCM2-218ENST00000541586 ADCYAP1R1P41586 468 aa31.17■■■□□ 2.58
CCM2-218ENST00000541586 AFMP43652 599 aa31.17■■■□□ 2.58
CCM2-218ENST00000541586 CCDC144BQ3MJ40 725 aa31.17■■■□□ 2.58
CCM2-218ENST00000541586 NAALADL2Q58DX5 795 aa31.17■■■□□ 2.58
CCM2-218ENST00000541586 DNAJC25Q9H1X3 360 aa31.17■■■□□ 2.58
CCM2-218ENST00000541586 ANO10Q9NW15 660 aa31.17■■■□□ 2.58
CCM2-218ENST00000541586 BIN1O00499 593 aa31.16■■■□□ 2.58
CCM2-218ENST00000541586 CYBAP13498 195 aa31.16■■■□□ 2.58
CCM2-218ENST00000541586 MTMR1Q13613 665 aa31.16■■■□□ 2.58
CCM2-218ENST00000541586 PLA2G4DQ86XP0 818 aa31.16■■■□□ 2.58
CCM2-218ENST00000541586 INPP4AQ96PE3 977 aaPredicted RBP31.16■■■□□ 2.58
CCM2-218ENST00000541586 PLIN2Q99541 437 aa31.16■■■□□ 2.58
CCM2-218ENST00000541586 JADE2Q9NQC1 790 aa31.16■■■□□ 2.58
CCM2-218ENST00000541586 C11orf97A0A1B0GVM6 126 aaPredicted RBP31.15■■■□□ 2.58
CCM2-218ENST00000541586 PLCG1P19174 1290 aa31.15■■■□□ 2.58
CCM2-218ENST00000541586 TMEM63BQ5T3F8 832 aa31.15■■■□□ 2.58
CCM2-218ENST00000541586 PKD2L1Q9P0L9 805 aa31.15■■■□□ 2.58
CCM2-218ENST00000541586 BRCA2P51587 3418 aa31.15■■■□□ 2.58
CCM2-218ENST00000541586 MEIS1O00470 390 aa31.15■■■□□ 2.58
CCM2-218ENST00000541586 ARP10275 920 aa31.15■■■□□ 2.58
CCM2-218ENST00000541586 LY6KQ17RY6 165 aa31.15■■■□□ 2.58
CCM2-218ENST00000541586 KRT79Q5XKE5 535 aa31.15■■■□□ 2.58
CCM2-218ENST00000541586 FAM200AQ8TCP9 573 aa31.15■■■□□ 2.58
CCM2-218ENST00000541586 LRRC15Q8TF66 581 aa31.15■■■□□ 2.58
CCM2-218ENST00000541586 HMX1Q9NP08 348 aaPredicted RBP31.15■■■□□ 2.58
CCM2-218ENST00000541586 MTFR1Q15390 333 aa31.14■■■□□ 2.58
CCM2-218ENST00000541586 MAP3K21Q5TCX8 1036 aa31.14■■■□□ 2.58
CCM2-218ENST00000541586 NT5DC1Q5TFE4 455 aa31.14■■■□□ 2.58
CCM2-218ENST00000541586 SNX29Q8TEQ0 813 aa31.14■■■□□ 2.58
CCM2-218ENST00000541586 SCFD2Q8WU76 684 aa31.14■■■□□ 2.58
CCM2-218ENST00000541586 CALML4Q96GE6 196 aa31.14■■■□□ 2.58
CCM2-218ENST00000541586 MTRQ99707 1265 aa31.14■■■□□ 2.58
CCM2-218ENST00000541586 KCNH7Q9NS40 1196 aa31.14■■■□□ 2.58
CCM2-218ENST00000541586 NRBP1Q9UHY1 535 aa31.14■■■□□ 2.58
CCM2-218ENST00000541586 FAM184BQ9ULE4 1060 aa31.14■■■□□ 2.58
CCM2-218ENST00000541586 SORBS3O60504 671 aa31.13■■■□□ 2.57
CCM2-218ENST00000541586 TXNP10599 105 aaKnown RBP31.13■■■□□ 2.57
CCM2-218ENST00000541586 NLRP12P59046 1061 aa31.13■■■□□ 2.57
CCM2-218ENST00000541586 SETQ01105 290 aaPredicted RBP31.13■■■□□ 2.57
CCM2-218ENST00000541586 SPIRE1Q08AE8 756 aa31.13■■■□□ 2.57
CCM2-218ENST00000541586 TTLL4Q14679 1199 aa31.13■■■□□ 2.57
CCM2-218ENST00000541586 C11orf57Q6ZUT1 292 aaPredicted RBP31.13■■■□□ 2.57
CCM2-218ENST00000541586 STAMQ92783 540 aa31.13■■■□□ 2.57
CCM2-218ENST00000541586 ARIH2O95376 493 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 CAVIN2O95810 425 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 PTGS1P23219 599 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 SARSP49591 514 aaKnown RBP31.12■■■□□ 2.57
CCM2-218ENST00000541586 TNFAIP2Q03169 654 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 GRB10Q13322 594 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 IQSEC1Q6DN90 963 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 SPATA20Q8TB22 786 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 SMARCE1Q969G3 411 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 GPRASP2Q96D09 838 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 SEMA3FQ13275 785 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 GJC2Q5T442 439 aaPredicted RBP31.12■■■□□ 2.57
CCM2-218ENST00000541586 ISM2Q6H9L7 571 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 CUEDC2Q9H467 287 aa31.12■■■□□ 2.57
CCM2-218ENST00000541586 SPATA31C2B4DYI2 1134 aa31.11■■■□□ 2.57
CCM2-218ENST00000541586 CASP1P29466 404 aa31.11■■■□□ 2.57
CCM2-218ENST00000541586 ZNF165P49910 485 aa31.11■■■□□ 2.57
CCM2-218ENST00000541586 SP2Q02086 613 aa31.11■■■□□ 2.57
CCM2-218ENST00000541586 DPYDQ12882 1025 aa31.11■■■□□ 2.57
CCM2-218ENST00000541586 DPCR1Q3MIW9 517 aa31.11■■■□□ 2.57
CCM2-218ENST00000541586 COL13A1Q5TAT6 717 aaPredicted RBP31.11■■■□□ 2.57
CCM2-218ENST00000541586 LENG1Q96BZ8 264 aaPredicted RBP31.11■■■□□ 2.57
CCM2-218ENST00000541586 PNMA5Q96PV4 448 aa31.11■■■□□ 2.57
CCM2-218ENST00000541586 UNC93B1Q9H1C4 597 aa31.11■■■□□ 2.57
CCM2-218ENST00000541586 CBX8Q9HC52 389 aa31.11■■■□□ 2.57
CCM2-218ENST00000541586 VAV3Q9UKW4 847 aa31.11■■■□□ 2.57
CCM2-218ENST00000541586 SEPT4O43236 478 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 ATP9AO75110 1047 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 SMC2O95347 1197 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 AKR1A1P14550 325 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 SMPD1P17405 629 aa31.1■■■□□ 2.57
CCM2-218ENST00000541586 NIPA1Q7RTP0 329 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms