RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 ATP9AO75110 1047 aa27.58■■■□□ 2.01
LEMD3-203ENST00000541171 TCF7P36402 384 aaPredicted RBP27.58■■■□□ 2.01
LEMD3-203ENST00000541171 UBE2SQ16763 222 aa27.58■■■□□ 2.01
LEMD3-203ENST00000541171 GIMAP8Q8ND71 665 aaPredicted RBP27.58■■■□□ 2.01
LEMD3-203ENST00000541171 TOP1MTQ969P6 601 aa27.58■■■□□ 2.01
LEMD3-203ENST00000541171 LRRC2Q9BYS8 371 aa27.58■■■□□ 2.01
LEMD3-203ENST00000541171 MICAL3Q7RTP6 2002 aa27.58■■■□□ 2.01
LEMD3-203ENST00000541171 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.57■■■□□ 2
LEMD3-203ENST00000541171 SLC27A2O14975 620 aa27.57■■■□□ 2
LEMD3-203ENST00000541171 ADAM17P78536 824 aa27.57■■■□□ 2
LEMD3-203ENST00000541171 SP7Q8TDD2 431 aaPredicted RBP27.57■■■□□ 2
LEMD3-203ENST00000541171 GPRASP2Q96D09 838 aa27.57■■■□□ 2
LEMD3-203ENST00000541171 SIP14410 1827 aa27.56■■■□□ 2
LEMD3-203ENST00000541171 CALM1P0DP23 149 aa27.56■■■□□ 2
LEMD3-203ENST00000541171 CALM2P0DP24 149 aa27.56■■■□□ 2
LEMD3-203ENST00000541171 CALM3P0DP25 149 aa27.56■■■□□ 2
LEMD3-203ENST00000541171 MARK3P27448 753 aa27.56■■■□□ 2
LEMD3-203ENST00000541171 EPC2Q52LR7 807 aa27.56■■■□□ 2
LEMD3-203ENST00000541171 C1QTNF1Q9BXJ1 281 aa27.56■■■□□ 2
LEMD3-203ENST00000541171 EPHX3Q9H6B9 360 aa27.56■■■□□ 2
LEMD3-203ENST00000541171 UBE2ZQ9H832 354 aaPredicted RBP27.56■■■□□ 2
LEMD3-203ENST00000541171 SLC12A7Q9Y666 1083 aa27.56■■■□□ 2
LEMD3-203ENST00000541171 NRCAMQ92823 1304 aa27.56■■■□□ 2
LEMD3-203ENST00000541171 KCNA2P16389 499 aa27.55■■■□□ 2
LEMD3-203ENST00000541171 ITGB5P18084 799 aa27.55■■■□□ 2
LEMD3-203ENST00000541171 FAM26DQ5JW98 314 aa27.55■■■□□ 2
LEMD3-203ENST00000541171 CREB3L3Q68CJ9 461 aa27.55■■■□□ 2
LEMD3-203ENST00000541171 RUFY4Q6ZNE9 571 aa27.55■■■□□ 2
LEMD3-203ENST00000541171 SEPT1Q8WYJ6 367 aa27.55■■■□□ 2
LEMD3-203ENST00000541171 CDHR1Q96JP9 859 aa27.55■■■□□ 2
LEMD3-203ENST00000541171 IFIH1Q9BYX4 1025 aaKnown RBP27.55■■■□□ 2
LEMD3-203ENST00000541171 GSTTP1A0A1W2PQM5 241 aa27.54■■■□□ 2
LEMD3-203ENST00000541171 CHRNA1P02708 482 aa27.54■■■□□ 2
LEMD3-203ENST00000541171 LIFRP42702 1097 aa27.54■■■□□ 2
LEMD3-203ENST00000541171 PPFIA1Q13136 1202 aa27.54■■■□□ 2
LEMD3-203ENST00000541171 APBB2Q92870 758 aa27.54■■■□□ 2
LEMD3-203ENST00000541171 GLG1Q92896 1179 aa27.54■■■□□ 2
LEMD3-203ENST00000541171 ESYT1Q9BSJ8 1104 aa27.54■■■□□ 2
LEMD3-203ENST00000541171 BRWD1Q9NSI6 2320 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 SPDYE3A6NKU9 549 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 GHRP10912 638 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 KCNA5P22460 613 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 GPM6BQ13491 265 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 MTMR1Q13613 665 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 PTPROQ16827 1216 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 HEATR3Q7Z4Q2 680 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 FANCBQ8NB91 859 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 SAMD11Q96NU1 681 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 ANO2Q9NQ90 1003 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 PCDHA6Q9UN73 950 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 PCDHA8Q9Y5H6 950 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 UBIAD1Q9Y5Z9 338 aa27.53■■■□□ 2
LEMD3-203ENST00000541171 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.52■■■□□ 2
LEMD3-203ENST00000541171 TMTC3Q6ZXV5 915 aa27.52■■■□□ 2
LEMD3-203ENST00000541171 MICU3Q86XE3 530 aa27.52■■■□□ 2
LEMD3-203ENST00000541171 TMEM192Q8IY95 271 aa27.52■■■□□ 2
LEMD3-203ENST00000541171 MRPL38Q96DV4 380 aaKnown RBP27.52■■■□□ 2
LEMD3-203ENST00000541171 ERAP1Q9NZ08 941 aa27.52■■■□□ 2
LEMD3-203ENST00000541171 IGBP1P78318 339 aa27.51■■□□□ 1.99
LEMD3-203ENST00000541171 NECTIN1Q15223 517 aa27.51■■□□□ 1.99
LEMD3-203ENST00000541171 GRIK4Q16099 956 aa27.51■■□□□ 1.99
LEMD3-203ENST00000541171 TAF2Q6P1X5 1199 aa27.51■■□□□ 1.99
LEMD3-203ENST00000541171 RSPH3Q86UC2 560 aa27.51■■□□□ 1.99
LEMD3-203ENST00000541171 H3BNC9 293 aa27.5■■□□□ 1.99
LEMD3-203ENST00000541171 DNAJB3Q8WWF6 145 aa27.5■■□□□ 1.99
LEMD3-203ENST00000541171 IL17RAQ96F46 866 aa27.5■■□□□ 1.99
LEMD3-203ENST00000541171 SMARCAD1Q9H4L7 1026 aa27.5■■□□□ 1.99
LEMD3-203ENST00000541171 JADE2Q9NQC1 790 aa27.5■■□□□ 1.99
LEMD3-203ENST00000541171 TUBE1Q9UJT0 475 aa27.5■■□□□ 1.99
LEMD3-203ENST00000541171 KAT6AQ92794 2004 aa27.5■■□□□ 1.99
LEMD3-203ENST00000541171 LEXMQ3ZCV2 418 aa27.49■■□□□ 1.99
LEMD3-203ENST00000541171 SYNE3Q6ZMZ3 975 aa27.49■■□□□ 1.99
LEMD3-203ENST00000541171 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.49■■□□□ 1.99
LEMD3-203ENST00000541171 KHSRPQ92945 711 aaKnown RBP eCLIP27.49■■□□□ 1.992e-7■■■□□ 18.5
LEMD3-203ENST00000541171 MGAT3Q09327 533 aa27.48■■□□□ 1.99
LEMD3-203ENST00000541171 LPIN1Q14693 890 aa27.48■■□□□ 1.99
LEMD3-203ENST00000541171 EP400NLQ6ZTU2 488 aa27.48■■□□□ 1.99
LEMD3-203ENST00000541171 RPAINQ86UA6 219 aa27.48■■□□□ 1.99
LEMD3-203ENST00000541171 FIBCD1Q8N539 461 aa27.48■■□□□ 1.99
LEMD3-203ENST00000541171 BANK1Q8NDB2 785 aa27.48■■□□□ 1.99
LEMD3-203ENST00000541171 ZBTB10Q96DT7 871 aa27.48■■□□□ 1.99
LEMD3-203ENST00000541171 EHMT1Q9H9B1 1298 aa27.48■■□□□ 1.99
LEMD3-203ENST00000541171 CD320Q9NPF0 282 aa27.48■■□□□ 1.99
LEMD3-203ENST00000541171 TIGD5Q53EQ6 642 aa27.47■■□□□ 1.99
LEMD3-203ENST00000541171 MARCH8Q5T0T0 291 aa27.47■■□□□ 1.99
LEMD3-203ENST00000541171 PGBD1Q96JS3 809 aa27.47■■□□□ 1.99
LEMD3-203ENST00000541171 FAM49AQ9H0Q0 323 aaPredicted RBP27.47■■□□□ 1.99
LEMD3-203ENST00000541171 CDY2AQ9Y6F7 541 aa27.47■■□□□ 1.99
LEMD3-203ENST00000541171 MAFGO15525 162 aa27.46■■□□□ 1.99
LEMD3-203ENST00000541171 CTNNB1P35222 781 aa27.46■■□□□ 1.99
LEMD3-203ENST00000541171 TCEAL5Q5H9L2 206 aa27.46■■□□□ 1.99
LEMD3-203ENST00000541171 WWC2Q6AWC2 1192 aa27.46■■□□□ 1.99
LEMD3-203ENST00000541171 PTCRAQ6ISU1 281 aaPredicted RBP27.46■■□□□ 1.99
LEMD3-203ENST00000541171 SGMS1Q86VZ5 419 aa27.46■■□□□ 1.99
LEMD3-203ENST00000541171 LRFN3Q9BTN0 628 aa27.46■■□□□ 1.99
LEMD3-203ENST00000541171 JPH1Q9HDC5 661 aaPredicted RBP27.46■■□□□ 1.99
LEMD3-203ENST00000541171 SLC9A2Q9UBY0 812 aa27.46■■□□□ 1.99
LEMD3-203ENST00000541171 MBLAC1A4D2B0 266 aaPredicted RBP27.45■■□□□ 1.98
LEMD3-203ENST00000541171 H3BQ06 376 aaPredicted RBP27.45■■□□□ 1.98
LEMD3-203ENST00000541171 ENPP3O14638 875 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms