RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 CAGE1Q8TC20 777 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 PPP1R13LQ8WUF5 828 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 SEPT1Q8WYJ6 367 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 ALG1Q9BT22 464 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 PKD2L1Q9P0L9 805 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 SLC9A2Q9UBY0 812 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 PTPRSQ13332 1948 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 DHX15O43143 795 aaKnown RBP14.9□□□□□ -0.02
LTBR-208ENST00000541005 CSF2RAP15509 400 aa14.9□□□□□ -0.02
LTBR-208ENST00000541005 SP4Q02446 784 aa14.9□□□□□ -0.02
LTBR-208ENST00000541005 SHHQ15465 462 aa14.9□□□□□ -0.02
LTBR-208ENST00000541005 C9orf50Q5SZB4 431 aa14.9□□□□□ -0.02
LTBR-208ENST00000541005 MOXD1Q6UVY6 613 aa14.9□□□□□ -0.02
LTBR-208ENST00000541005 KRT25Q7Z3Z0 450 aa14.9□□□□□ -0.02
LTBR-208ENST00000541005 ZSCAN31Q96LW9 406 aaPredicted RBP14.9□□□□□ -0.02
LTBR-208ENST00000541005 TBC1D32Q96NH3 1257 aa14.9□□□□□ -0.02
LTBR-208ENST00000541005 LLPHQ9BRT6 129 aaKnown RBP14.9□□□□□ -0.02
LTBR-208ENST00000541005 SH2B1Q9NRF2 756 aaPredicted RBP14.9□□□□□ -0.02
LTBR-208ENST00000541005 KCNJ14Q9UNX9 436 aa14.9□□□□□ -0.02
LTBR-208ENST00000541005 NOD1Q9Y239 953 aa14.9□□□□□ -0.02
LTBR-208ENST00000541005 CYP3A7-CYP3A51PA0A087WV96 503 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 IPO5O00410 1097 aaKnown RBP14.89□□□□□ -0.03
LTBR-208ENST00000541005 JAK2O60674 1132 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 ATG7O95352 703 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 SMIM10L2AP0DMW4 78 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 SMIM10L2BP0DMW5 78 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 CYP3A7P24462 503 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 CHMP4BP1P59074 171 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 ACTR2P61160 394 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 PTK7Q13308 1070 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 BFSP2Q13515 415 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 HIC1Q14526 733 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 PSRC1Q6PGN9 363 aaPredicted RBP14.89□□□□□ -0.03
LTBR-208ENST00000541005 CCDC155Q8N6L0 562 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 TBCKQ8TEA7 893 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 AFAP1L1Q8TED9 768 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 DHX38Q92620 1227 aaKnown RBP14.89□□□□□ -0.03
LTBR-208ENST00000541005 MBOAT7Q96N66 472 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 IL23AQ9NPF7 189 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 TBC1D22BQ9NU19 505 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 ERAP1Q9NZ08 941 aa14.89□□□□□ -0.03
LTBR-208ENST00000541005 IGKV6D-21A0A0A0MT36 114 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 SOX1O00570 391 aaPredicted RBP14.88□□□□□ -0.03
LTBR-208ENST00000541005 CCNE2O96020 404 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 PFKMP08237 780 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 RFC2P35250 354 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 ADAM17P78536 824 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 NONOQ15233 471 aaKnown RBP eCLIP14.88□□□□□ -0.03
LTBR-208ENST00000541005 TRIM71Q2Q1W2 868 aaKnown RBP14.88□□□□□ -0.03
LTBR-208ENST00000541005 Q4G0T1 1027 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 PRR16Q569H4 304 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 TMEM240Q5SV17 173 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 UTP14CQ5TAP6 766 aaKnown RBP14.88□□□□□ -0.03
LTBR-208ENST00000541005 RASIP1Q5U651 963 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 GPR153Q6NV75 609 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 C16orf59Q7L2K0 433 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 SERINC5Q86VE9 423 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 VWCEQ96DN2 955 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 PCYT2Q99447 389 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 ZNF577Q9BSK1 485 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 SMARCAD1Q9H4L7 1026 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 GJB4Q9NTQ9 266 aa14.88□□□□□ -0.03
LTBR-208ENST00000541005 C17orf102A2RUQ5 167 aa14.87□□□□□ -0.03
LTBR-208ENST00000541005 ST18O60284 1047 aa14.87□□□□□ -0.03
LTBR-208ENST00000541005 DTNBO60941 627 aa14.87□□□□□ -0.03
LTBR-208ENST00000541005 IQCF3P0C7M6 154 aa14.87□□□□□ -0.03
LTBR-208ENST00000541005 CCL23P55773 120 aa14.87□□□□□ -0.03
LTBR-208ENST00000541005 ZNF746Q6NUN9 644 aaPredicted RBP14.87□□□□□ -0.03
LTBR-208ENST00000541005 CCDC83Q8IWF9 413 aa14.87□□□□□ -0.03
LTBR-208ENST00000541005 LMBR1Q8WVP7 490 aa14.87□□□□□ -0.03
LTBR-208ENST00000541005 SLC5A5Q92911 643 aa14.87□□□□□ -0.03
LTBR-208ENST00000541005 TNFRSF25Q93038 417 aa14.87□□□□□ -0.03
LTBR-208ENST00000541005 RNPC3Q96LT9 517 aaKnown RBP14.87□□□□□ -0.03
LTBR-208ENST00000541005 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.87□□□□□ -0.037e-8■□□□□ 11.3
LTBR-208ENST00000541005 RNPEPQ9H4A4 650 aa14.87□□□□□ -0.03
LTBR-208ENST00000541005 NRCAMQ92823 1304 aa14.87□□□□□ -0.03
LTBR-208ENST00000541005 CCDC194A0A1B0GVG4 234 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 MSH4O15457 936 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 CAND2O75155 1236 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 PARNO95453 639 aaKnown RBP14.86□□□□□ -0.03
LTBR-208ENST00000541005 MMP1P03956 469 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 GNAT1P11488 350 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 SELPP16109 830 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 KRT2P35908 639 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 SLC26A2P50443 739 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 ZNF200P98182 395 aaPredicted RBP14.86□□□□□ -0.03
LTBR-208ENST00000541005 KRT76Q01546 638 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 ABHD15Q6UXT9 468 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 PLPPR4Q7Z2D5 763 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 SMAP1Q8IYB5 467 aaPredicted RBP14.86□□□□□ -0.03
LTBR-208ENST00000541005 RPUSD2Q8IZ73 545 aaKnown RBP14.86□□□□□ -0.03
LTBR-208ENST00000541005 RETREG2Q8NC44 543 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 OXER1Q8TDS5 423 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 HERVK_113Q902F9 699 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 GLG1Q92896 1179 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 WNT8BQ93098 351 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 SCLYQ96I15 445 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 RIT2Q99578 217 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 BACH2Q9BYV9 841 aa14.86□□□□□ -0.03
LTBR-208ENST00000541005 AZI2Q9H6S1 392 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms