RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 KCNH2Q12809 1159 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 SHROOM1Q2M3G4 852 aaPredicted RBP17.49■□□□□ 0.39
CACFD1-206ENST00000540581 DDX47Q9H0S4 455 aaKnown RBP17.49■□□□□ 0.39
CACFD1-206ENST00000540581 EMILIN3Q9NT22 766 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 PLAAQ9Y263 795 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 CAPN7Q9Y6W3 813 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 LAMB1P07942 1786 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 H0YHG0 523 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 NR2F2P24468 414 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 GTF2IP78347 998 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 PABPC4Q13310 644 aaKnown RBP eCLIP17.48■□□□□ 0.39
CACFD1-206ENST00000540581 NAB2Q15742 525 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 ALS2CLQ60I27 953 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 ICE2Q659A1 982 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 SCFD1Q8WVM8 642 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 RIOX1Q9H6W3 641 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 MYH1P12882 1939 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 SSU72P8A0A1W2PR75 194 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 RFC4P35249 363 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 SCNN1DP51172 638 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 SLC18A3Q16572 532 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 CDCA7Q9BWT1 371 aaPredicted RBP17.48■□□□□ 0.39
CACFD1-206ENST00000540581 RIC8AQ9NPQ8 531 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 MTMR4Q9NYA4 1195 aa17.48■□□□□ 0.39
CACFD1-206ENST00000540581 CCNL1Q9UK58 526 aaPredicted RBP17.48■□□□□ 0.39
CACFD1-206ENST00000540581 SFI1A8K8P3 1242 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 MYO1FO00160 1098 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 CLIC2O15247 247 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 RHBDL3P58872 404 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 PSMC6P62333 389 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 CYP4A11Q02928 519 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 GRAPQ13588 217 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 RPS6KA1Q15418 735 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 GRAPLQ8TC17 118 aaPredicted RBP17.47■□□□□ 0.39
CACFD1-206ENST00000540581 RPGRQ92834 1020 aaKnown RBP17.47■□□□□ 0.39
CACFD1-206ENST00000540581 PSTPIP2Q9H939 334 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 ROBO3Q96MS0 1386 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 IRS2Q9Y4H2 1338 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 NR1D1P20393 614 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 TMEM119Q4V9L6 283 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 PIK3R5Q8WYR1 880 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 CAVIN3Q969G5 261 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 BCS1LQ9Y276 419 aa17.47■□□□□ 0.39
CACFD1-206ENST00000540581 ATP2C2O75185 946 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 ZNF571Q7Z3V5 609 aaPredicted RBP17.46■□□□□ 0.39
CACFD1-206ENST00000540581 CCDC65Q8IXS2 484 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 RNF10Q8N5U6 811 aaKnown RBP17.46■□□□□ 0.39
CACFD1-206ENST00000540581 CNBD1Q8NA66 436 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 GDF3Q9NR23 364 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 E7EVH7 732 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 RPS6KA4O75676 772 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 LSP1P33241 339 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 ERVK-9P63128 1117 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 ZCWPW2Q504Y3 356 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 MEI1Q5TIA1 1274 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 ZNF572Q7Z3I7 529 aaPredicted RBP17.46■□□□□ 0.39
CACFD1-206ENST00000540581 UBLCP1Q8WVY7 318 aaPredicted RBP17.46■□□□□ 0.39
CACFD1-206ENST00000540581 DPH5Q9H2P9 285 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 LUC7LQ9NQ29 371 aaKnown RBP17.46■□□□□ 0.39
CACFD1-206ENST00000540581 HDAC9Q9UKV0 1011 aa17.46■□□□□ 0.39
CACFD1-206ENST00000540581 GPR75-ASB3A0A0A6YYF3 556 aa17.46■□□□□ 0.38
CACFD1-206ENST00000540581 MED24O75448 989 aa17.46■□□□□ 0.38
CACFD1-206ENST00000540581 KIAA0754O94854 1291 aa17.46■□□□□ 0.38
CACFD1-206ENST00000540581 ITGA4P13612 1032 aa17.46■□□□□ 0.38
CACFD1-206ENST00000540581 ITIH3Q06033 890 aa17.46■□□□□ 0.38
CACFD1-206ENST00000540581 PRPF4BQ13523 1007 aaKnown RBP17.46■□□□□ 0.38
CACFD1-206ENST00000540581 GBP6Q6ZN66 633 aa17.46■□□□□ 0.38
CACFD1-206ENST00000540581 IQCKQ8N0W5 287 aa17.46■□□□□ 0.38
CACFD1-206ENST00000540581 OTUD6BQ8N6M0 293 aa17.46■□□□□ 0.38
CACFD1-206ENST00000540581 IQCDQ96DY2 449 aa17.46■□□□□ 0.38
CACFD1-206ENST00000540581 LEMD3Q9Y2U8 911 aa17.46■□□□□ 0.38
CACFD1-206ENST00000540581 COPB2P35606 906 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 FLT3P36888 993 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 CACNB3P54284 484 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 SEMA3FQ13275 785 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 PDIA5Q14554 519 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 ODF2Q5BJF6 829 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 TRIM59Q8IWR1 403 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 CUL5Q93034 780 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 INPP4AQ96PE3 977 aaPredicted RBP17.45■□□□□ 0.38
CACFD1-206ENST00000540581 DDX4Q9NQI0 724 aaKnown RBP17.45■□□□□ 0.38
CACFD1-206ENST00000540581 PCDHB13Q9Y5F0 798 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 COL22A1Q8NFW1 1626 aaPredicted RBP17.45■□□□□ 0.38
CACFD1-206ENST00000540581 RSPH10B2B2RC85 870 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 RSPH10BP0C881 870 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 TMOD1P28289 359 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 MNAT1P51948 309 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 HDLBPQ00341 1268 aaKnown RBP17.45■□□□□ 0.38
CACFD1-206ENST00000540581 KCNA1Q09470 495 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 PRR16Q569H4 304 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 USP38Q8NB14 1042 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 CELF4Q9BZC1 486 aaKnown RBP17.45■□□□□ 0.38
CACFD1-206ENST00000540581 NEUROG2Q9H2A3 272 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 AJAP1Q9UKB5 411 aaPredicted RBP17.45■□□□□ 0.38
CACFD1-206ENST00000540581 UTRNP46939 3433 aa17.45■□□□□ 0.38
CACFD1-206ENST00000540581 CCDC88AQ3V6T2 1871 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 CETN3O15182 167 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 MYBP10242 640 aa17.44■□□□□ 0.38
CACFD1-206ENST00000540581 CYP11B2P19099 503 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms