RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 MXRA8Q9BRK3 442 aa23.98■■□□□ 1.43
CHFR-217ENST00000540537 EMSYQ7Z589 1322 aa23.98■■□□□ 1.43
CHFR-217ENST00000540537 ABHD14A-ACY1A0A1B0GW23 586 aa23.97■■□□□ 1.43
CHFR-217ENST00000540537 KIF28PB7ZC32 967 aa23.97■■□□□ 1.43
CHFR-217ENST00000540537 EFCAB14O75071 495 aa23.97■■□□□ 1.43
CHFR-217ENST00000540537 SCG2P13521 617 aa23.97■■□□□ 1.43
CHFR-217ENST00000540537 WDR5P61964 334 aaKnown RBP23.97■■□□□ 1.43
CHFR-217ENST00000540537 PTPRSQ13332 1948 aa23.97■■□□□ 1.43
CHFR-217ENST00000540537 MBTPS1Q14703 1052 aa23.97■■□□□ 1.43
CHFR-217ENST00000540537 CUL9Q8IWT3 2517 aa23.97■■□□□ 1.43
CHFR-217ENST00000540537 SETD4Q9NVD3 440 aa23.97■■□□□ 1.43
CHFR-217ENST00000540537 GSTTP1A0A1W2PQM5 241 aa23.96■■□□□ 1.43
CHFR-217ENST00000540537 RSPH10B2B2RC85 870 aa23.96■■□□□ 1.43
CHFR-217ENST00000540537 DLL1O00548 723 aa23.96■■□□□ 1.43
CHFR-217ENST00000540537 CA3P07451 260 aa23.96■■□□□ 1.43
CHFR-217ENST00000540537 RSPH10BP0C881 870 aa23.96■■□□□ 1.43
CHFR-217ENST00000540537 SREBF1P36956 1147 aa23.96■■□□□ 1.43
CHFR-217ENST00000540537 ADAM17P78536 824 aa23.96■■□□□ 1.43
CHFR-217ENST00000540537 PGBD1Q96JS3 809 aa23.96■■□□□ 1.43
CHFR-217ENST00000540537 KCNH7Q9NS40 1196 aa23.96■■□□□ 1.43
CHFR-217ENST00000540537 PKD2L1Q9P0L9 805 aa23.96■■□□□ 1.43
CHFR-217ENST00000540537 NRCAMQ92823 1304 aa23.95■■□□□ 1.42
CHFR-217ENST00000540537 ESYT2A0FGR8 921 aa23.95■■□□□ 1.42
CHFR-217ENST00000540537 PRPF3O43395 683 aaKnown RBP23.95■■□□□ 1.42
CHFR-217ENST00000540537 LGR5O75473 907 aa23.95■■□□□ 1.42
CHFR-217ENST00000540537 IKBKEQ14164 716 aa23.95■■□□□ 1.42
CHFR-217ENST00000540537 ADGRE1Q14246 886 aa23.95■■□□□ 1.42
CHFR-217ENST00000540537 TCTN1Q2MV58 587 aa23.95■■□□□ 1.42
CHFR-217ENST00000540537 CEP55Q53EZ4 464 aa23.95■■□□□ 1.42
CHFR-217ENST00000540537 CCDC12Q8WUD4 166 aaPredicted RBP23.95■■□□□ 1.42
CHFR-217ENST00000540537 JPH1Q9HDC5 661 aaPredicted RBP23.95■■□□□ 1.42
CHFR-217ENST00000540537 ERAP1Q9NZ08 941 aa23.95■■□□□ 1.42
CHFR-217ENST00000540537 NFASCO94856 1347 aa23.94■■□□□ 1.42
CHFR-217ENST00000540537 EVCP57679 992 aa23.94■■□□□ 1.42
CHFR-217ENST00000540537 ARHGAP4P98171 946 aa23.94■■□□□ 1.42
CHFR-217ENST00000540537 CYP2W1Q8TAV3 490 aa23.94■■□□□ 1.42
CHFR-217ENST00000540537 LMBR1Q8WVP7 490 aa23.94■■□□□ 1.42
CHFR-217ENST00000540537 ZMYND12Q9H0C1 365 aa23.94■■□□□ 1.42
CHFR-217ENST00000540537 TMEM260Q9NX78 707 aa23.94■■□□□ 1.42
CHFR-217ENST00000540537 SLC9A2Q9UBY0 812 aa23.94■■□□□ 1.42
CHFR-217ENST00000540537 DEFB103AP81534 67 aa23.93■■□□□ 1.42
CHFR-217ENST00000540537 PKN1Q16512 942 aa23.93■■□□□ 1.42
CHFR-217ENST00000540537 RUFY3Q7L099 469 aa23.93■■□□□ 1.42
CHFR-217ENST00000540537 SDF4Q9BRK5 362 aa23.93■■□□□ 1.42
CHFR-217ENST00000540537 SMARCAD1Q9H4L7 1026 aa23.93■■□□□ 1.42
CHFR-217ENST00000540537 ZSWIM6Q9HCJ5 1215 aa23.93■■□□□ 1.42
CHFR-217ENST00000540537 MICAL3Q7RTP6 2002 aa23.93■■□□□ 1.42
CHFR-217ENST00000540537 MEIS1O00470 390 aa23.92■■□□□ 1.42
CHFR-217ENST00000540537 TLL1O43897 1013 aa23.92■■□□□ 1.42
CHFR-217ENST00000540537 ARP10275 920 aa23.92■■□□□ 1.42
CHFR-217ENST00000540537 AKAP17AQ02040 695 aaKnown RBP23.92■■□□□ 1.42
CHFR-217ENST00000540537 NTRK3Q16288 839 aa23.92■■□□□ 1.42
CHFR-217ENST00000540537 ERICH6BQ5W0A0 696 aa23.92■■□□□ 1.42
CHFR-217ENST00000540537 MCTP2Q6DN12 878 aa23.92■■□□□ 1.42
CHFR-217ENST00000540537 NIPA1Q7RTP0 329 aa23.92■■□□□ 1.42
CHFR-217ENST00000540537 USP38Q8NB14 1042 aa23.92■■□□□ 1.42
CHFR-217ENST00000540537 GLG1Q92896 1179 aa23.92■■□□□ 1.42
CHFR-217ENST00000540537 RNF26Q9BY78 433 aaPredicted RBP23.92■■□□□ 1.42
CHFR-217ENST00000540537 AGO4Q9HCK5 861 aaKnown RBP23.92■■□□□ 1.42
CHFR-217ENST00000540537 C6orf50Q9HD87 102 aa23.92■■□□□ 1.42
CHFR-217ENST00000540537 PPP4R2Q9NY27 417 aa23.92■■□□□ 1.42
CHFR-217ENST00000540537 IFNAR1P17181 557 aa23.91■■□□□ 1.42
CHFR-217ENST00000540537 PDIA3P30101 505 aaKnown RBP23.91■■□□□ 1.42
CHFR-217ENST00000540537 PPFIA1Q13136 1202 aa23.91■■□□□ 1.42
CHFR-217ENST00000540537 PLEKHG4Q58EX7 1191 aa23.91■■□□□ 1.42
CHFR-217ENST00000540537 JAKMIP3Q5VZ66 844 aa23.91■■□□□ 1.42
CHFR-217ENST00000540537 TAF2Q6P1X5 1199 aa23.91■■□□□ 1.42
CHFR-217ENST00000540537 RPAINQ86UA6 219 aa23.91■■□□□ 1.42
CHFR-217ENST00000540537 DBF4BQ8NFT6 615 aa23.91■■□□□ 1.42
CHFR-217ENST00000540537 PHKBQ93100 1093 aa23.91■■□□□ 1.42
CHFR-217ENST00000540537 TM6SF1Q9BZW5 370 aa23.91■■□□□ 1.42
CHFR-217ENST00000540537 TRANK1O15050 2925 aa23.91■■□□□ 1.42
CHFR-217ENST00000540537 GJB5O95377 273 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 CTSHP09668 335 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 IGFBP4P22692 258 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 MARK3P27448 753 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 GNA11P29992 359 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 ZNF76P36508 570 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 TAP1Q03518 808 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 ITGB3BPQ13352 177 aaPredicted RBP23.9■■□□□ 1.42
CHFR-217ENST00000540537 TOB2Q14106 344 aaPredicted RBP23.9■■□□□ 1.42
CHFR-217ENST00000540537 FAM26DQ5JW98 314 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 CRYGNQ8WXF5 182 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 PCYT2Q99447 389 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 ZBED2Q9BTP6 218 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 AZI2Q9H6S1 392 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 CYP46A1Q9Y6A2 500 aa23.9■■□□□ 1.42
CHFR-217ENST00000540537 CYP3A4P08684 503 aa23.89■■□□□ 1.41
CHFR-217ENST00000540537 ACTR2P61160 394 aa23.89■■□□□ 1.41
CHFR-217ENST00000540537 MKRN4PQ13434 485 aaPredicted RBP23.89■■□□□ 1.41
CHFR-217ENST00000540537 GRIK4Q16099 956 aa23.89■■□□□ 1.41
CHFR-217ENST00000540537 REXO1Q8N1G1 1221 aaKnown RBP23.89■■□□□ 1.41
CHFR-217ENST00000540537 CCDC148Q8NFR7 591 aa23.89■■□□□ 1.41
CHFR-217ENST00000540537 SEPT8Q92599 483 aa23.89■■□□□ 1.41
CHFR-217ENST00000540537 MBLAC1A4D2B0 266 aaPredicted RBP23.88■■□□□ 1.41
CHFR-217ENST00000540537 ARHGEF15O94989 841 aa23.88■■□□□ 1.41
CHFR-217ENST00000540537 CCT2P78371 535 aaKnown RBP23.88■■□□□ 1.41
CHFR-217ENST00000540537 TMCO2Q7Z6W1 182 aaPredicted RBP23.88■■□□□ 1.41
CHFR-217ENST00000540537 PLA2G4DQ86XP0 818 aa23.88■■□□□ 1.41
CHFR-217ENST00000540537 BICD2Q8TD16 824 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms