RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 BFSP2Q13515 415 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 GNL2Q13823 731 aaKnown RBP10.28□□□□□ -0.76
PXN-209ENST00000540221 INF2Q27J81 1249 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 FAM160B1Q5W0V3 765 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 MFSD5Q6N075 450 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 MIS18BP1Q6P0N0 1132 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 PIK3AP1Q6ZUJ8 805 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 TMEM199Q8N511 208 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 RDM1Q8NG50 284 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 CAGE1Q8TC20 777 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 GLG1Q92896 1179 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 HIPK3Q9H422 1215 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 DDX25Q9UHL0 483 aaKnown RBP10.28□□□□□ -0.76
PXN-209ENST00000540221 NRCAMQ92823 1304 aa10.28□□□□□ -0.76
PXN-209ENST00000540221 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.76
PXN-209ENST00000540221 GSTTP1A0A1W2PQM5 241 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 TRIM43BA6NCK2 446 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 RRN3P2A6NIE6 340 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 WDR64B1ANS9 1081 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 BTBD18B2RXH4 712 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 DHX15O43143 795 aaKnown RBP10.27□□□□□ -0.77
PXN-209ENST00000540221 B4GALT4O60513 344 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 GAS7O60861 476 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 CAND2O75155 1236 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 BAG4O95429 457 aaKnown RBP10.27□□□□□ -0.77
PXN-209ENST00000540221 PSAPP07602 524 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 PDCP20941 246 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 RFC2P35250 354 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 MAGEA10P43363 369 aaPredicted RBP10.27□□□□□ -0.77
PXN-209ENST00000540221 TRAPPC10P48553 1259 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 STAT5BP51692 787 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 JAK3P52333 1124 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 CHMP4BP1P59074 171 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 SP4Q02446 784 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 PTK7Q13308 1070 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 PPIGQ13427 754 aaKnown RBP eCLIP10.27□□□□□ -0.77
PXN-209ENST00000540221 PTGISQ16647 500 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 LETM2Q2VYF4 491 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 UTP14CQ5TAP6 766 aaKnown RBP10.27□□□□□ -0.77
PXN-209ENST00000540221 LRCH2Q5VUJ6 765 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 SLFN12Q8IYM2 578 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 RETREG2Q8NC44 543 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 AFAP1L1Q8TED9 768 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 SLC5A5Q92911 643 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 TNFRSF25Q93038 417 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 LENG9Q96B70 501 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 TRIM43Q96BQ3 446 aaPredicted RBP10.27□□□□□ -0.77
PXN-209ENST00000540221 INTS4Q96HW7 963 aaKnown RBP10.27□□□□□ -0.77
PXN-209ENST00000540221 TEKT3Q9BXF9 490 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 TRPV6Q9H1D0 765 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 BCAS3Q9H6U6 928 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 PKD2L1Q9P0L9 805 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 HDAC6Q9UBN7 1215 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 SMC3Q9UQE7 1217 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 PCDHA10Q9Y5I2 948 aa10.27□□□□□ -0.77
PXN-209ENST00000540221 IGKV6D-21A0A0A0MT36 114 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 C17orf102A2RUQ5 167 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 BACH1O14867 736 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 ADAMTS3O15072 1205 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 MSH4O15457 936 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 MARCH6O60337 910 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 SORBS3O60504 671 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 CCNT1O60563 726 aaKnown RBP10.26□□□□□ -0.77
PXN-209ENST00000540221 DKC1O60832 514 aaKnown RBP eCLIP10.26□□□□□ -0.77
PXN-209ENST00000540221 PFKMP08237 780 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 PDIA4P13667 645 aaKnown RBP10.26□□□□□ -0.77
PXN-209ENST00000540221 HOXC8P31273 242 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 FPGSQ05932 587 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 RBL2Q08999 1139 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 NR5A1Q13285 461 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 CUL4AQ13619 759 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 ABHD15Q6UXT9 468 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 CHRDL2Q6WN34 429 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 SH3RF1Q7Z6J0 888 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 NOSTRINQ8IVI9 506 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 RPUSD2Q8IZ73 545 aaKnown RBP10.26□□□□□ -0.77
PXN-209ENST00000540221 OXER1Q8TDS5 423 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 SNX21Q969T3 373 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 NOC4LQ9BVI4 516 aaKnown RBP10.26□□□□□ -0.77
PXN-209ENST00000540221 UBE2OQ9C0C9 1292 aaKnown RBP10.26□□□□□ -0.77
PXN-209ENST00000540221 PRO3102Q9H379 93 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 GJB4Q9NTQ9 266 aa10.26□□□□□ -0.77
PXN-209ENST00000540221 NOL7Q9UMY1 257 aaKnown RBP10.26□□□□□ -0.77
PXN-209ENST00000540221 H3BQV1 296 aa10.25□□□□□ -0.77
PXN-209ENST00000540221 EDIL3O43854 480 aa10.25□□□□□ -0.77
PXN-209ENST00000540221 HBP1O60381 514 aa10.25□□□□□ -0.77
PXN-209ENST00000540221 PSMD10O75832 226 aa10.25□□□□□ -0.77
PXN-209ENST00000540221 CD2BP2O95400 341 aaKnown RBP10.25□□□□□ -0.77
PXN-209ENST00000540221 TDP2O95551 362 aa10.25□□□□□ -0.77
PXN-209ENST00000540221 SMIM10L2AP0DMW4 78 aa10.25□□□□□ -0.77
PXN-209ENST00000540221 SMIM10L2BP0DMW5 78 aa10.25□□□□□ -0.77
PXN-209ENST00000540221 U2AF2P26368 475 aaKnown RBP eCLIP10.25□□□□□ -0.77
PXN-209ENST00000540221 GJB2P29033 226 aa10.25□□□□□ -0.77
PXN-209ENST00000540221 MDM2Q00987 491 aaPredicted RBP10.25□□□□□ -0.77
PXN-209ENST00000540221 GDF6Q6KF10 455 aaPredicted RBP10.25□□□□□ -0.77
PXN-209ENST00000540221 TAF2Q6P1X5 1199 aa10.25□□□□□ -0.77
PXN-209ENST00000540221 PDXDC2PQ6P474 469 aa10.25□□□□□ -0.77
PXN-209ENST00000540221 PSRC1Q6PGN9 363 aaPredicted RBP10.25□□□□□ -0.77
PXN-209ENST00000540221 FAM43BQ6ZT52 329 aaPredicted RBP10.25□□□□□ -0.77
PXN-209ENST00000540221 SERINC5Q86VE9 423 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms