RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 SMARCAD1Q9H4L7 1026 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 TBC1D22BQ9NU19 505 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 PCDH10Q9P2E7 1040 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 TCEAL9Q9UHQ7 104 aa15.21■□□□□ 0.03
CCDC130-202ENST00000540216 GSTTP1A0A1W2PQM5 241 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 JAK2O60674 1132 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 LGR5O75473 907 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 GNAT1P11488 350 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 CYP2C18P33260 490 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 MCM2P49736 904 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 RBL2Q08999 1139 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 PTK7Q13308 1070 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 UTP14CQ5TAP6 766 aaKnown RBP15.2■□□□□ 0.02
CCDC130-202ENST00000540216 TRIM50Q86XT4 487 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 CCDC83Q8IWF9 413 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 LENG9Q96B70 501 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 BACH2Q9BYV9 841 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 WNT8AQ9H1J5 351 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 AZI2Q9H6S1 392 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 ERAP1Q9NZ08 941 aa15.2■□□□□ 0.02
CCDC130-202ENST00000540216 RANBP2P49792 3224 aaKnown RBP15.2■□□□□ 0.02
CCDC130-202ENST00000540216 UMODL1Q5DID0 1318 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 CYP3A7-CYP3A51PA0A087WV96 503 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 C17orf102A2RUQ5 167 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 ATG7O95352 703 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 SMIM10L2AP0DMW4 78 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 SMIM10L2BP0DMW5 78 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 CSF2RAP15509 400 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 CYP3A7P24462 503 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 RFC2P35250 354 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 KRT2P35908 639 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 FXR1P51114 621 aaKnown RBP eCLIP15.19■□□□□ 0.02
CCDC130-202ENST00000540216 Q4G0T1 1027 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 PSRC1Q6PGN9 363 aaPredicted RBP15.19■□□□□ 0.02
CCDC130-202ENST00000540216 RETREG2Q8NC44 543 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 AFAP1L1Q8TED9 768 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 PPP1R13LQ8WUF5 828 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 GLG1Q92896 1179 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 TNPO1Q92973 898 aaKnown RBP15.19■□□□□ 0.02
CCDC130-202ENST00000540216 CTAGE1Q96RT6 745 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 NAP1L4Q99733 375 aaKnown RBP15.19■□□□□ 0.02
CCDC130-202ENST00000540216 IL23AQ9NPF7 189 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 TELO2Q9Y4R8 837 aa15.19■□□□□ 0.02
CCDC130-202ENST00000540216 NRCAMQ92823 1304 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 TANC1Q9C0D5 1861 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 DHX15O43143 795 aaKnown RBP15.18■□□□□ 0.02
CCDC130-202ENST00000540216 EDIL3O43854 480 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 PARNO95453 639 aaKnown RBP15.18■□□□□ 0.02
CCDC130-202ENST00000540216 MMP1P03956 469 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 PFKMP08237 780 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 GCFC2P16383 781 aaKnown RBP15.18■□□□□ 0.02
CCDC130-202ENST00000540216 SLC26A2P50443 739 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 KRT76Q01546 638 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 SHHQ15465 462 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 INF2Q27J81 1249 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 ZNF746Q6NUN9 644 aaPredicted RBP15.18■□□□□ 0.02
CCDC130-202ENST00000540216 NEK8Q86SG6 692 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 SERINC5Q86VE9 423 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 SMAP1Q8IYB5 467 aaPredicted RBP15.18■□□□□ 0.02
CCDC130-202ENST00000540216 RPUSD2Q8IZ73 545 aaKnown RBP15.18■□□□□ 0.02
CCDC130-202ENST00000540216 MBOAT7Q96N66 472 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 RIT2Q99578 217 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 GJB4Q9NTQ9 266 aa15.18■□□□□ 0.02
CCDC130-202ENST00000540216 MSH4O15457 936 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 CCNE2O96020 404 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 EPHB4P54760 987 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 CCL23P55773 120 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 FAM160B1Q5W0V3 765 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 KRT40Q6A162 431 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 MIS18BP1Q6P0N0 1132 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 PLPPR4Q7Z2D5 763 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 OXER1Q8TDS5 423 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 SLC5A5Q92911 643 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 ATP6V0A1Q93050 837 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 RNPC3Q96LT9 517 aaKnown RBP15.17■□□□□ 0.02
CCDC130-202ENST00000540216 PCYT2Q99447 389 aa15.17■□□□□ 0.02
CCDC130-202ENST00000540216 IGKV6D-21A0A0A0MT36 114 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 DDX39AO00148 427 aaKnown RBP15.16■□□□□ 0.02
CCDC130-202ENST00000540216 GAS7O60861 476 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 DTNBO60941 627 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 CAND2O75155 1236 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 TDP2O95551 362 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 SELPP16109 830 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 STAT5BP51692 787 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 PPFIA1Q13136 1202 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 SAFBQ15424 915 aaKnown RBP eCLIP15.16■□□□□ 0.02
CCDC130-202ENST00000540216 C9orf50Q5SZB4 431 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 PPP4R3AQ6IN85 833 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 ABHD15Q6UXT9 468 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 PIK3AP1Q6ZUJ8 805 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 FAM184AQ8NB25 1140 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 LMBR1Q8WVP7 490 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 DHX38Q92620 1227 aaKnown RBP15.16■□□□□ 0.02
CCDC130-202ENST00000540216 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 C8orf76Q96K31 380 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 MTIF3Q9H2K0 278 aaKnown RBP15.16■□□□□ 0.02
CCDC130-202ENST00000540216 RNPEPQ9H4A4 650 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 KIF3AQ9Y496 699 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 PCDHA10Q9Y5I2 948 aa15.16■□□□□ 0.02
CCDC130-202ENST00000540216 BACH1O14867 736 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms